Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

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The map label for this gene is yraM [H]

Identifier: 170751370

GI number: 170751370

Start: 5308664

End: 5309824

Strand: Direct

Name: yraM [H]

Synonym: Mrad2831_4989

Alternate gene names: 170751370

Gene position: 5308664-5309824 (Clockwise)

Preceding gene: 170751369

Following gene: 170751371

Centisome position: 87.34

GC content: 75.62

Gene sequence:

>1161_bases
GTGAGCGCGGCTCCGCGTTCCGGCACGCTGCCGGCCGTGTTCATGCGCGGCGGCACCAGCAAGGCGCTGATGCTGCACCG
CCGGGACGTGCCGGGGGATCTCGCCGCCTGGGAGCCGGTCTTCCTCTCCGCCATGGACAGCCCCGACCCGTTCGGGCGGC
AGCTCAACGGCATGGGCGGGGGCGTCTCGTCGGTCTCGAAGATCTGCGTGGTGGAGCGCTCCGCGCGGCCGGACGCCGAC
ATCGACTACACCTTCGTGCAGGTCGTGGTCCGGGACGGCCGCATCGACCTGTCGGGCAATTGCGGCAACATGCTCGCCGC
CGTGGGACCGTTCGCGGTCAACGAGGGGCTCGTCGAGGTCCCGGACGGCCCGGTGCGGCTGCGGATCTTCAACACCAACA
CGCGCAAGCGGATCGCGGCGACCTTCGCGGTGGAGGGCGGCCGCAGCGTCTACCGCGGCGACCTCGCGATCCCCGGCGTC
GCTGGCACCGGCGCGCCGATCCAGCTCGACTTCCTGGATCCGGGCGGCGCCACGACCGGCCGGCTGCTCCCGACCGGCAC
CGTCCGCCAGAGGCTCGACGTGCCGGGCCTCGGCGCGATCGAGGCCTCCCTGATCGACGCCGCCAACGCCTGCGTGTTCG
TCCGCGCCGCCGATCTCGGGCTGGCCGGCACCGAGCTGCCCGCAGCCCTGGAGGCCGTGCCGGGCCTCCTCGACCGGCTG
GCGCGGATCCGCCGGGCCGGCTCCGTGGCGATGGGCATCGCGCCGGACGTCGAGGCGGCGGCGCGCGTCGTCCACGTGCC
CTTCGTCGGCCTCGTCGCCCCGCCGCAGGAGTCCGGCAGCCTCTCCGGCGACGCGATCCGCGCCGCCGAGATCGACCTGA
CCGCCCGGGTCGTCTCCAACGGCGTGCCGCATCAGGCGCTGCCGCTGACCGCCACCCTGTGCCTCGCGGTCGCCGCCCGG
CTCGAAGGCAGTCTCGTCCACGAGGCCGCCCGCCCCACCGGCGCGGCCCTGCGGGTCGGCATGCCGTCGGGCATCCTCAC
CGCCGACGCCGCCGTGACCCGCGGGGCCGACGGCTGGCGGGCCGAGCGCGGCGCCTTCTTCCGCACGGCGCGCCCGCTGA
TGCGTGGCGCGGTGTTCTACGACGCGCCGCCGCCCGTCTGA

Upstream 100 bases:

>100_bases
TGTTCGTCGGCCGCCTGCGCAAGAAGCTCGCGGTGGACCTGATCCAGACCGTGCGCGGCCTCGGCTACCTCGTGGATCCC
AACCAGCCGCCGGCGCGGAT

Downstream 100 bases:

>100_bases
GCGACCGACGCAACCATGATCGACCTCATCGGCCTCTTCTCCCTGCGCCGCCGCTCCATCGCGGTGCGGCTCGCCGTGTC
GGCGTTCCTGTCGAGCTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MSAAPRSGTLPAVFMRGGTSKALMLHRRDVPGDLAAWEPVFLSAMDSPDPFGRQLNGMGGGVSSVSKICVVERSARPDAD
IDYTFVQVVVRDGRIDLSGNCGNMLAAVGPFAVNEGLVEVPDGPVRLRIFNTNTRKRIAATFAVEGGRSVYRGDLAIPGV
AGTGAPIQLDFLDPGGATTGRLLPTGTVRQRLDVPGLGAIEASLIDAANACVFVRAADLGLAGTELPAALEAVPGLLDRL
ARIRRAGSVAMGIAPDVEAAARVVHVPFVGLVAPPQESGSLSGDAIRAAEIDLTARVVSNGVPHQALPLTATLCLAVAAR
LEGSLVHEAARPTGAALRVGMPSGILTADAAVTRGADGWRAERGAFFRTARPLMRGAVFYDAPPPV

Sequences:

>Translated_386_residues
MSAAPRSGTLPAVFMRGGTSKALMLHRRDVPGDLAAWEPVFLSAMDSPDPFGRQLNGMGGGVSSVSKICVVERSARPDAD
IDYTFVQVVVRDGRIDLSGNCGNMLAAVGPFAVNEGLVEVPDGPVRLRIFNTNTRKRIAATFAVEGGRSVYRGDLAIPGV
AGTGAPIQLDFLDPGGATTGRLLPTGTVRQRLDVPGLGAIEASLIDAANACVFVRAADLGLAGTELPAALEAVPGLLDRL
ARIRRAGSVAMGIAPDVEAAARVVHVPFVGLVAPPQESGSLSGDAIRAAEIDLTARVVSNGVPHQALPLTATLCLAVAAR
LEGSLVHEAARPTGAALRVGMPSGILTADAAVTRGADGWRAERGAFFRTARPLMRGAVFYDAPPPV
>Mature_385_residues
SAAPRSGTLPAVFMRGGTSKALMLHRRDVPGDLAAWEPVFLSAMDSPDPFGRQLNGMGGGVSSVSKICVVERSARPDADI
DYTFVQVVVRDGRIDLSGNCGNMLAAVGPFAVNEGLVEVPDGPVRLRIFNTNTRKRIAATFAVEGGRSVYRGDLAIPGVA
GTGAPIQLDFLDPGGATTGRLLPTGTVRQRLDVPGLGAIEASLIDAANACVFVRAADLGLAGTELPAALEAVPGLLDRLA
RIRRAGSVAMGIAPDVEAAARVVHVPFVGLVAPPQESGSLSGDAIRAAEIDLTARVVSNGVPHQALPLTATLCLAVAARL
EGSLVHEAARPTGAALRVGMPSGILTADAAVTRGADGWRAERGAFFRTARPLMRGAVFYDAPPPV

Specific function: Unknown

COG id: COG2828

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybhH [H]

Homologues:

Organism=Escherichia coli, GI1786985, Length=371, Percent_Identity=32.0754716981132, Blast_Score=178, Evalue=4e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007400 [H]

Pfam domain/function: PF04303 PrpF [H]

EC number: NA

Molecular weight: Translated: 39826; Mature: 39695

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAPRSGTLPAVFMRGGTSKALMLHRRDVPGDLAAWEPVFLSAMDSPDPFGRQLNGMGG
CCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHCCCCC
GVSSVSKICVVERSARPDADIDYTFVQVVVRDGRIDLSGNCGNMLAAVGPFAVNEGLVEV
CHHHHHHEEEEECCCCCCCCCCCEEEEEEEECCEEEECCCCCCHHHHHCCHHHCCCEEEC
PDGPVRLRIFNTNTRKRIAATFAVEGGRSVYRGDLAIPGVAGTGAPIQLDFLDPGGATTG
CCCCEEEEEECCCCCCEEEEEEEECCCCEEEECCEECCCCCCCCCEEEEEEECCCCCCCC
RLLPTGTVRQRLDVPGLGAIEASLIDAANACVFVRAADLGLAGTELPAALEAVPGLLDRL
CCCCCHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHH
ARIRRAGSVAMGIAPDVEAAARVVHVPFVGLVAPPQESGSLSGDAIRAAEIDLTARVVSN
HHHHHCCCEEECCCCCHHHHHEEEEECEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHC
GVPHQALPLTATLCLAVAARLEGSLVHEAARPTGAALRVGMPSGILTADAAVTRGADGWR
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEECCCCCCEECCHHHHCCCCCCC
AERGAFFRTARPLMRGAVFYDAPPPV
CCCCCHHHHHHHHHHCEEEECCCCCC
>Mature Secondary Structure 
SAAPRSGTLPAVFMRGGTSKALMLHRRDVPGDLAAWEPVFLSAMDSPDPFGRQLNGMGG
CCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHCCCCC
GVSSVSKICVVERSARPDADIDYTFVQVVVRDGRIDLSGNCGNMLAAVGPFAVNEGLVEV
CHHHHHHEEEEECCCCCCCCCCCEEEEEEEECCEEEECCCCCCHHHHHCCHHHCCCEEEC
PDGPVRLRIFNTNTRKRIAATFAVEGGRSVYRGDLAIPGVAGTGAPIQLDFLDPGGATTG
CCCCEEEEEECCCCCCEEEEEEEECCCCEEEECCEECCCCCCCCCEEEEEEECCCCCCCC
RLLPTGTVRQRLDVPGLGAIEASLIDAANACVFVRAADLGLAGTELPAALEAVPGLLDRL
CCCCCHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHH
ARIRRAGSVAMGIAPDVEAAARVVHVPFVGLVAPPQESGSLSGDAIRAAEIDLTARVVSN
HHHHHCCCEEECCCCCHHHHHEEEEECEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHC
GVPHQALPLTATLCLAVAARLEGSLVHEAARPTGAALRVGMPSGILTADAAVTRGADGWR
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEECCCCCCEECCHHHHCCCCCCC
AERGAFFRTARPLMRGAVFYDAPPPV
CCCCCHHHHHHHHHHCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9141695; 9308178; 9384377 [H]