| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170751253
Identifier: 170751253
GI number: 170751253
Start: 5201680
End: 5203041
Strand: Direct
Name: 170751253
Synonym: Mrad2831_4870
Alternate gene names: NA
Gene position: 5201680-5203041 (Clockwise)
Preceding gene: 170751252
Following gene: 170751256
Centisome position: 85.58
GC content: 74.01
Gene sequence:
>1362_bases ATGTCCCTCTTCGCGAAGCTGCGGCGGCGCGCCGACGAGGGCCGGCCTGTCCGGGTCGGCCTGATCGGCGCCGGCAAATT CGGCTCGATGTACCTGTCGCAGGCGCCGCGCACGCCCGGCATCCACCTCGTCGCGGTGGCCGACCTGTCGCCGGACCGGG CGCGCGAAGCGCTGCGCCGGGTCGGCTGGGACGACGCCCGGTTCGCCGCGCGCGCGCTGGAGGCGGCCGCGCGCGGCGGC ACGACCCTCGTGACCGAGGATGCCGAAGCGATGATCGCGAGCCCGTTCGTGGACATCGTCATCGACGCCACCGGCAGCCC GGCCGCCGGCATCCGCCACGCGCTCCAGGCCTTCGCGGCGGCCAAGCACATCGTCATGGTCAATGTCGAGGCCGACGTGC TGGCCGGGCCGCTGCTGGCGCGCCGGGCGGCGGAGGCCGGGGTGATCTACTCGATGGCCTCGGGCGACCAGCCGGCGCTC ATCGCCGAGCTGGTCGACTGGGCCCGCACCATCGGGCTGGAGGTGATCTGCGCCGGGAAGGGCACCAAGTACCTCCCGGC CTACCACGCCTCCACGCCCGACACGGTCTGGGGCCATTACGGCTTCAGCGAGAGCCAGGTCGCGGGCGGCGACTTCAACC CGCAGATGTTCAACTCCTTCCTCGACGGCACCAAGTCGGCGCTGGAGATGGCCGCCGTGGCCAACGCCTGCGGGCTCACC CCGCCGCGCGACGGCCTCGCCTTCCCGCCCTGCGGCGTCGACGACCTGCCGGGCATCCTCAAGCCGGCGGCCGACGGCGG CCTCCTCACCGAGCGCGGCACCGTCGAGGTGGTCTCATCGGTGGAGCGGGACGGGCGGCCGGTCTTCCGGGACCTGCGCT GGGGCGTCTACGCGGTGTTCGAGGCGCCGAGCCCCTACGTGCGCGACTGCTTCGCCCAGTACGGCCTCAAGACCGATTCG AGCGGCCGGTTCGCCGCGACCTACAAGCCCTATCACCTGATCGGCCTCGAGCTCGGCATCTCGGTCGCCTCCATCGCGGT CCGCGGCGAGGCGACGGGGGCGACGGGCGAGTGGCGCGGCGACGTCGCCGCCACGGCCAAGCGCGCGCTGCGGGCCGGCG AGCGGCTCGACGGCGAGGGCGGGTTCACCGTCTACGGCAAGCTGATGCCGGCGGCCGAGTCCCTGGCGCAGGACGCCCTG CCGATCGGGCTCGCCCACAACATGGTCCTCAAGACCGACGTGCCCGCGGGCCGGGCCGTGCGCTGGAGCGACGTCGCCTA CGACGCCGGTCAAGAGGCGATCCGCGTCCGTCGCGAGATGGAGGACCTGTTCCGCGGGGCGACGGGGCGGCCCGCCGGGT AG
Upstream 100 bases:
>100_bases CCCTCAACGCCCTCGGGAACCGCACTAGGTCCCTGTCCAACAACGCGGCGAACGCGGCGGGGCTGGGTCCCGACCGCCCC GCCCAGGGAGAGAACGCCCC
Downstream 100 bases:
>100_bases AGCCGTTCCCGGCCGCGATGAGTCGGACGCGATTGCCGAGCCCTTGCCGCACGAGGCGCGGGTCCCCTCTCCCGTTGCGG GAGAGGGGTTCGTGGCGCGG
Product: SAF domain-containing protein
Products: NA
Alternate protein names: SAF Domain Protein; Homoserine Dehydrogenase; NAD(P)-Dependent Oxidoreductase; Dihydrodipicolinate Reductase; Oxidoreductase; Oxidoreductase Domain Protein; Oxidoreductase Domain-Containing Protein; Oxidoreductase-Like; StrU Protein; Saf Domain Protein; SAF Domain Family Protein
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MSLFAKLRRRADEGRPVRVGLIGAGKFGSMYLSQAPRTPGIHLVAVADLSPDRAREALRRVGWDDARFAARALEAAARGG TTLVTEDAEAMIASPFVDIVIDATGSPAAGIRHALQAFAAAKHIVMVNVEADVLAGPLLARRAAEAGVIYSMASGDQPAL IAELVDWARTIGLEVICAGKGTKYLPAYHASTPDTVWGHYGFSESQVAGGDFNPQMFNSFLDGTKSALEMAAVANACGLT PPRDGLAFPPCGVDDLPGILKPAADGGLLTERGTVEVVSSVERDGRPVFRDLRWGVYAVFEAPSPYVRDCFAQYGLKTDS SGRFAATYKPYHLIGLELGISVASIAVRGEATGATGEWRGDVAATAKRALRAGERLDGEGGFTVYGKLMPAAESLAQDAL PIGLAHNMVLKTDVPAGRAVRWSDVAYDAGQEAIRVRREMEDLFRGATGRPAG
Sequences:
>Translated_453_residues MSLFAKLRRRADEGRPVRVGLIGAGKFGSMYLSQAPRTPGIHLVAVADLSPDRAREALRRVGWDDARFAARALEAAARGG TTLVTEDAEAMIASPFVDIVIDATGSPAAGIRHALQAFAAAKHIVMVNVEADVLAGPLLARRAAEAGVIYSMASGDQPAL IAELVDWARTIGLEVICAGKGTKYLPAYHASTPDTVWGHYGFSESQVAGGDFNPQMFNSFLDGTKSALEMAAVANACGLT PPRDGLAFPPCGVDDLPGILKPAADGGLLTERGTVEVVSSVERDGRPVFRDLRWGVYAVFEAPSPYVRDCFAQYGLKTDS SGRFAATYKPYHLIGLELGISVASIAVRGEATGATGEWRGDVAATAKRALRAGERLDGEGGFTVYGKLMPAAESLAQDAL PIGLAHNMVLKTDVPAGRAVRWSDVAYDAGQEAIRVRREMEDLFRGATGRPAG >Mature_452_residues SLFAKLRRRADEGRPVRVGLIGAGKFGSMYLSQAPRTPGIHLVAVADLSPDRAREALRRVGWDDARFAARALEAAARGGT TLVTEDAEAMIASPFVDIVIDATGSPAAGIRHALQAFAAAKHIVMVNVEADVLAGPLLARRAAEAGVIYSMASGDQPALI AELVDWARTIGLEVICAGKGTKYLPAYHASTPDTVWGHYGFSESQVAGGDFNPQMFNSFLDGTKSALEMAAVANACGLTP PRDGLAFPPCGVDDLPGILKPAADGGLLTERGTVEVVSSVERDGRPVFRDLRWGVYAVFEAPSPYVRDCFAQYGLKTDSS GRFAATYKPYHLIGLELGISVASIAVRGEATGATGEWRGDVAATAKRALRAGERLDGEGGFTVYGKLMPAAESLAQDALP IGLAHNMVLKTDVPAGRAVRWSDVAYDAGQEAIRVRREMEDLFRGATGRPAG
Specific function: Unknown
COG id: COG4091
COG function: function code E; Predicted homoserine dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47854; Mature: 47723
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFAKLRRRADEGRPVRVGLIGAGKFGSMYLSQAPRTPGIHLVAVADLSPDRAREALRR CCHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHH VGWDDARFAARALEAAARGGTTLVTEDAEAMIASPFVDIVIDATGSPAAGIRHALQAFAA CCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHH AKHIVMVNVEADVLAGPLLARRAAEAGVIYSMASGDQPALIAELVDWARTIGLEVICAGK HCEEEEEEECHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHCCEEEEECCC GTKYLPAYHASTPDTVWGHYGFSESQVAGGDFNPQMFNSFLDGTKSALEMAAVANACGLT CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC PPRDGLAFPPCGVDDLPGILKPAADGGLLTERGTVEVVSSVERDGRPVFRDLRWGVYAVF CCCCCCCCCCCCCCCCCHHHCCCCCCCEECCCCHHHHHHHHHHCCCHHHHHHCCCEEEEE EAPSPYVRDCFAQYGLKTDSSGRFAATYKPYHLIGLELGISVASIAVRGEATGATGEWRG ECCCHHHHHHHHHCCCCCCCCCCEEEEECCEEEEEEECCCEEEEEEEECCCCCCCCCCCC DVAATAKRALRAGERLDGEGGFTVYGKLMPAAESLAQDALPIGLAHNMVLKTDVPAGRAV HHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCHHCCEEEEECCCCCCEE RWSDVAYDAGQEAIRVRREMEDLFRGATGRPAG EECHHHHHCCHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SLFAKLRRRADEGRPVRVGLIGAGKFGSMYLSQAPRTPGIHLVAVADLSPDRAREALRR CHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHH VGWDDARFAARALEAAARGGTTLVTEDAEAMIASPFVDIVIDATGSPAAGIRHALQAFAA CCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHH AKHIVMVNVEADVLAGPLLARRAAEAGVIYSMASGDQPALIAELVDWARTIGLEVICAGK HCEEEEEEECHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHCCEEEEECCC GTKYLPAYHASTPDTVWGHYGFSESQVAGGDFNPQMFNSFLDGTKSALEMAAVANACGLT CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC PPRDGLAFPPCGVDDLPGILKPAADGGLLTERGTVEVVSSVERDGRPVFRDLRWGVYAVF CCCCCCCCCCCCCCCCCHHHCCCCCCCEECCCCHHHHHHHHHHCCCHHHHHHCCCEEEEE EAPSPYVRDCFAQYGLKTDSSGRFAATYKPYHLIGLELGISVASIAVRGEATGATGEWRG ECCCHHHHHHHHHCCCCCCCCCCEEEEECCEEEEEEECCCEEEEEEEECCCCCCCCCCCC DVAATAKRALRAGERLDGEGGFTVYGKLMPAAESLAQDALPIGLAHNMVLKTDVPAGRAV HHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCHHCCEEEEECCCCCCEE RWSDVAYDAGQEAIRVRREMEDLFRGATGRPAG EECHHHHHCCHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA