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The map label for this gene is perR [C]

Identifier: 170751252

GI number: 170751252

Start: 5200570

End: 5201502

Strand: Direct

Name: perR [C]

Synonym: Mrad2831_4869

Alternate gene names: 170751252

Gene position: 5200570-5201502 (Clockwise)

Preceding gene: 170751250

Following gene: 170751253

Centisome position: 85.57

GC content: 77.17

Gene sequence:

>933_bases
ATGCGCCGGATCCCGAGTTTCCCCGCCCTGCGGGCCTTCGAGGCGGCCGCGCGCCTCGGCAGCTTCGCGCGGGCGAGCGA
GGAGCTGCACCTCACCCCCTCGGCGGTGAGCCACCAGATCCGCGCCCTGGAGCGGTGGTTCGGGCGCGCCCTGTTCCGGC
GGGCGAACCGGCAGGCGACGCTCACGCCGGACGGGGGGCGCCTGCTCGCGGGGCTGACGGGCGCCTTCGACGCGATCGAG
GCGATCTGCGCGGAGCTCGGCCCGCCGCCCGCGGCCCTCGCCGCGGCGCTCGCCGTCCACTGCACGCCGAGCTTCGCGGC
GAAGTGGCTCGGGCCGCGGCTCCCCGCCTTCGTGGAGGCGCATCCCGGCATCGCCATCCACCTGTCGACCAGCGCCGACC
CGGTGGATCTCGGCCGGCACGCGGAGATCGACATCCTGATCGCCTACGGCCGCCCGCCGCGCGGGCCCGGGCTGACCGTC
GAGTCCCTCGGACCGGAGGAGATCGCCGCCCTGTGCACGCCGGCGGTCGCCCGGGCCGCGCAGCCGGACGCGGCCGGGCC
GATCGGGCCCTTCGCGCGGCTCGACTCGTCCTTCAGTCCCGTCCGCTGGCCCGACTGGTTCGCCCGGAACGGCCTGCCGA
TGCCGACCGGGGCGGCGGGCGCGGCCTTCGACCGGGGCTCGCTGGTGATCTCGGCGGCCGCTCAGGGGCTCGGCGTGGCG
CTCGAGACCCTGCGGTTCGCCCGGGACGAGCTCGCCGCCGGGCAGCTGGTGCGCCTCGGCGGCGATCGGGCCGCGAGCCT
GACCCGCGACCTCCACTTCATCTGCTACCGCGAGCGCGACGGGGCCCTGGAGAAGATCCGGGCCTTCCGGCGCTGGCTCC
TGGACGTGGAGGCGGAGAGCCGGGCGGGGGCGGCCCGAGACGCAGAGACCTGA

Upstream 100 bases:

>100_bases
GGCGGCCGAGCGCGCAGTCGCCGGTACTCTCTTGCGCACCCGTTCCGTTGACAAACGACGATTTCTCACGCTTTTCGTGA
ATTCAATTCACGGATCGCCG

Downstream 100 bases:

>100_bases
TCCCTCGCCCCGACCCTCGCCGGCACCGGCGAGGGCGCGCGTCGTCCGTACCGACGGCCAGACTTGTCAGGCCGCGGCCC
TCAACGCCCTCGGGAACCGC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MRRIPSFPALRAFEAAARLGSFARASEELHLTPSAVSHQIRALERWFGRALFRRANRQATLTPDGGRLLAGLTGAFDAIE
AICAELGPPPAALAAALAVHCTPSFAAKWLGPRLPAFVEAHPGIAIHLSTSADPVDLGRHAEIDILIAYGRPPRGPGLTV
ESLGPEEIAALCTPAVARAAQPDAAGPIGPFARLDSSFSPVRWPDWFARNGLPMPTGAAGAAFDRGSLVISAAAQGLGVA
LETLRFARDELAAGQLVRLGGDRAASLTRDLHFICYRERDGALEKIRAFRRWLLDVEAESRAGAARDAET

Sequences:

>Translated_310_residues
MRRIPSFPALRAFEAAARLGSFARASEELHLTPSAVSHQIRALERWFGRALFRRANRQATLTPDGGRLLAGLTGAFDAIE
AICAELGPPPAALAAALAVHCTPSFAAKWLGPRLPAFVEAHPGIAIHLSTSADPVDLGRHAEIDILIAYGRPPRGPGLTV
ESLGPEEIAALCTPAVARAAQPDAAGPIGPFARLDSSFSPVRWPDWFARNGLPMPTGAAGAAFDRGSLVISAAAQGLGVA
LETLRFARDELAAGQLVRLGGDRAASLTRDLHFICYRERDGALEKIRAFRRWLLDVEAESRAGAARDAET
>Mature_310_residues
MRRIPSFPALRAFEAAARLGSFARASEELHLTPSAVSHQIRALERWFGRALFRRANRQATLTPDGGRLLAGLTGAFDAIE
AICAELGPPPAALAAALAVHCTPSFAAKWLGPRLPAFVEAHPGIAIHLSTSADPVDLGRHAEIDILIAYGRPPRGPGLTV
ESLGPEEIAALCTPAVARAAQPDAAGPIGPFARLDSSFSPVRWPDWFARNGLPMPTGAAGAAFDRGSLVISAAAQGLGVA
LETLRFARDELAAGQLVRLGGDRAASLTRDLHFICYRERDGALEKIRAFRRWLLDVEAESRAGAARDAET

Specific function: Apparent Regulatory Gene Involved In Peroxide Resistance In Stationary Phase. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786448, Length=287, Percent_Identity=34.1463414634146, Blast_Score=151, Evalue=5e-38,
Organism=Escherichia coli, GI1789173, Length=293, Percent_Identity=35.4948805460751, Blast_Score=150, Evalue=1e-37,
Organism=Escherichia coli, GI1788706, Length=295, Percent_Identity=32.5423728813559, Blast_Score=128, Evalue=5e-31,
Organism=Escherichia coli, GI145693193, Length=305, Percent_Identity=26.8852459016393, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1790208, Length=241, Percent_Identity=29.045643153527, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1787128, Length=126, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1786401, Length=306, Percent_Identity=23.8562091503268, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32897; Mature: 32897

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRIPSFPALRAFEAAARLGSFARASEELHLTPSAVSHQIRALERWFGRALFRRANRQAT
CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCEE
LTPDGGRLLAGLTGAFDAIEAICAELGPPPAALAAALAVHCTPSFAAKWLGPRLPAFVEA
ECCCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCHHEEC
HPGIAIHLSTSADPVDLGRHAEIDILIAYGRPPRGPGLTVESLGPEEIAALCTPAVARAA
CCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCEECCCCCHHHHHHHHHHHHHHCC
QPDAAGPIGPFARLDSSFSPVRWPDWFARNGLPMPTGAAGAAFDRGSLVISAAAQGLGVA
CCCCCCCCCHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHH
LETLRFARDELAAGQLVRLGGDRAASLTRDLHFICYRERDGALEKIRAFRRWLLDVEAES
HHHHHHHHHHHCCCCEEEECCCHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHCCCCHH
RAGAARDAET
CCCCCCCCCC
>Mature Secondary Structure
MRRIPSFPALRAFEAAARLGSFARASEELHLTPSAVSHQIRALERWFGRALFRRANRQAT
CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCEE
LTPDGGRLLAGLTGAFDAIEAICAELGPPPAALAAALAVHCTPSFAAKWLGPRLPAFVEA
ECCCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCHHEEC
HPGIAIHLSTSADPVDLGRHAEIDILIAYGRPPRGPGLTVESLGPEEIAALCTPAVARAA
CCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCEECCCCCHHHHHHHHHHHHHHCC
QPDAAGPIGPFARLDSSFSPVRWPDWFARNGLPMPTGAAGAAFDRGSLVISAAAQGLGVA
CCCCCCCCCHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHH
LETLRFARDELAAGQLVRLGGDRAASLTRDLHFICYRERDGALEKIRAFRRWLLDVEAES
HHHHHHHHHHHCCCCEEEECCCHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHCCCCHH
RAGAARDAET
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]