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The map label for this gene is arnB [H]

Identifier: 170751005

GI number: 170751005

Start: 4911540

End: 4912676

Strand: Direct

Name: arnB [H]

Synonym: Mrad2831_4616

Alternate gene names: 170751005

Gene position: 4911540-4912676 (Clockwise)

Preceding gene: 170751004

Following gene: 170751006

Centisome position: 80.81

GC content: 73.35

Gene sequence:

>1137_bases
ATGATCCCGATCGCCAAGCCCGAAGTCGGCGACCCCGAGGCCGAGGCCGCCGCCGCCGTCGTCCGCTCCGGATGGCTGAC
CCAGGGGCCGCAGGTCGCGGCCTTCGAGACGGAGTTCGCCGCGACCGTCGGCGCGCCCCACGCCTGCGCGGTCTCGAACT
GCACGACCGCGCTGCATCTCGCGCTCCTCGCCGTCGGGGTCGGCCCCGGCGACGAGGTGGTGACGGTGAGCCACAGCTTC
ATCGCCACCGCCAACGCCATCGCCCAGTGCGGTGCGACGCCGATCTTCGTCGACATCGACCCGGCCACCTTCAACATGGC
TCCGGACGCCGCCGCGGCGGCGATCACCGCTAAGACGAAGGCGATCGTCTGCGTCCACCAGATGGGCATGCCCTGCGACC
TGGAGGCGATCGCCGCGATCGGGCGCCGGTCCGGCATCCCGGTGATCGAGGACGCGGCCTGCGCCATCGGCTCCGAGCGG
CTCCAGGGCGACGTCTGGCGGCCGATCGGCAGCCCGGCGGGCGACATCGCCTGCTTCTCGTTCCACCCGCGCAAGGTGCT
GACCACCGGCGACGGCGGCATGATCACCACCGCCAGCGCCGCGTGGGACCGGACCTTCCGGCTGCTGCGCCAGCACGGGA
TGAGCGTCTCCGACATCGCCCGCCACGGCAGCGCCCGGGTGGTGGTCGAGGAGTACGCCATCGCGGGTTTCAACTACCGG
ATGACGGACGTGCAGGCGGCCATCGGCCGGGAGCAGCTGAAGCGGCTGCCCGACCTGATCGCCCGGCGCCGCGCCCTCGC
CGACGGCTACCGCGCGCGGCTGGCCGACCTTCCCGGGGTGACGCCGCCGCCCGAGCCGATGGGGCTGCGCAGCAACTGGC
AGAGCTACTGCGTCCGCCTCCCGGACGACGCGGACCAGCAGGCGGTCATGCAGGCGATGCTCGACCGGGGCATCGCCACC
CGCCGGGGCATCATGTGCGCGCATCTGGAGCCGCCCTACGCGGAGGCGCCGCGGCGGTTCGCGCTGCCCGAATCCGAGCG
GGCGCGCGACCACGCGATCCTGCTGCCGCTCTACGCGGCGATGACGGAGGCGGAGCAGGATCAGGTCGTCGACGCCCTGC
GCGACGCCCTGCGATGA

Upstream 100 bases:

>100_bases
TCGGCTTCGAGGCGAAGATCGGGGCCGCCGAGGGCCTCGCCGACCTCGTCGCCTGGTGGCAGGACGAGTCCCGCTCCGAG
CATCTGCGGCGGGCGATGGC

Downstream 100 bases:

>100_bases
TCCCCGCACCGGTCAAGAGCCTCGCCCGGACGGTCGGCCTGACGCGCCCGCGCGTCGCCGCCGCCCGGATGGCCTGCGAG
CGCACGACGCTCGCCCTCGC

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: UDP-(beta-L-threo-pentapyranosyl-4''-ulose diphosphate) aminotransferase; UDP-Ara4O aminotransferase; UDP-4-amino-4-deoxy-L-arabinose aminotransferase [H]

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MIPIAKPEVGDPEAEAAAAVVRSGWLTQGPQVAAFETEFAATVGAPHACAVSNCTTALHLALLAVGVGPGDEVVTVSHSF
IATANAIAQCGATPIFVDIDPATFNMAPDAAAAAITAKTKAIVCVHQMGMPCDLEAIAAIGRRSGIPVIEDAACAIGSER
LQGDVWRPIGSPAGDIACFSFHPRKVLTTGDGGMITTASAAWDRTFRLLRQHGMSVSDIARHGSARVVVEEYAIAGFNYR
MTDVQAAIGREQLKRLPDLIARRRALADGYRARLADLPGVTPPPEPMGLRSNWQSYCVRLPDDADQQAVMQAMLDRGIAT
RRGIMCAHLEPPYAEAPRRFALPESERARDHAILLPLYAAMTEAEQDQVVDALRDALR

Sequences:

>Translated_378_residues
MIPIAKPEVGDPEAEAAAAVVRSGWLTQGPQVAAFETEFAATVGAPHACAVSNCTTALHLALLAVGVGPGDEVVTVSHSF
IATANAIAQCGATPIFVDIDPATFNMAPDAAAAAITAKTKAIVCVHQMGMPCDLEAIAAIGRRSGIPVIEDAACAIGSER
LQGDVWRPIGSPAGDIACFSFHPRKVLTTGDGGMITTASAAWDRTFRLLRQHGMSVSDIARHGSARVVVEEYAIAGFNYR
MTDVQAAIGREQLKRLPDLIARRRALADGYRARLADLPGVTPPPEPMGLRSNWQSYCVRLPDDADQQAVMQAMLDRGIAT
RRGIMCAHLEPPYAEAPRRFALPESERARDHAILLPLYAAMTEAEQDQVVDALRDALR
>Mature_378_residues
MIPIAKPEVGDPEAEAAAAVVRSGWLTQGPQVAAFETEFAATVGAPHACAVSNCTTALHLALLAVGVGPGDEVVTVSHSF
IATANAIAQCGATPIFVDIDPATFNMAPDAAAAAITAKTKAIVCVHQMGMPCDLEAIAAIGRRSGIPVIEDAACAIGSER
LQGDVWRPIGSPAGDIACFSFHPRKVLTTGDGGMITTASAAWDRTFRLLRQHGMSVSDIARHGSARVVVEEYAIAGFNYR
MTDVQAAIGREQLKRLPDLIARRRALADGYRARLADLPGVTPPPEPMGLRSNWQSYCVRLPDDADQQAVMQAMLDRGIAT
RRGIMCAHLEPPYAEAPRRFALPESERARDHAILLPLYAAMTEAEQDQVVDALRDALR

Specific function: Catalyzes the conversion of UDP-4-keto-arabinose (UDP- Ara4O) to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family. ArnB subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=382, Percent_Identity=38.2198952879581, Blast_Score=232, Evalue=3e-62,
Organism=Escherichia coli, GI2367285, Length=387, Percent_Identity=29.7157622739018, Blast_Score=137, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022850
- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: =2.6.1.87 [H]

Molecular weight: Translated: 40234; Mature: 40234

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPIAKPEVGDPEAEAAAAVVRSGWLTQGPQVAAFETEFAATVGAPHACAVSNCTTALHL
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHCCCCCHHHHHHHHHHHHH
ALLAVGVGPGDEVVTVSHSFIATANAIAQCGATPIFVDIDPATFNMAPDAAAAAITAKTK
HHHHHCCCCCCCEEEECHHHHHHHHHHHHCCCCEEEEEECCCEECCCCCHHHHHHHHCCC
AIVCVHQMGMPCDLEAIAAIGRRSGIPVIEDAACAIGSERLQGDVWRPIGSPAGDIACFS
EEEEEECCCCCCCHHHHHHHHHCCCCCEEHHHHHHHCHHHHCCCCCCCCCCCCCCEEEEE
FHPRKVLTTGDGGMITTASAAWDRTFRLLRQHGMSVSDIARHGSARVVVEEYAIAGFNYR
ECCCEEEEECCCCEEEECHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEEHHHHCCCCEE
MTDVQAAIGREQLKRLPDLIARRRALADGYRARLADLPGVTPPPEPMGLRSNWQSYCVRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHEEEC
PDDADQQAVMQAMLDRGIATRRGIMCAHLEPPYAEAPRRFALPESERARDHAILLPLYAA
CCCCCHHHHHHHHHHCCCHHHCCEEEEECCCCHHHCCCCCCCCCCCCCCCCEEHHHHHHH
MTEAEQDQVVDALRDALR
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIPIAKPEVGDPEAEAAAAVVRSGWLTQGPQVAAFETEFAATVGAPHACAVSNCTTALHL
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHCCCCCHHHHHHHHHHHHH
ALLAVGVGPGDEVVTVSHSFIATANAIAQCGATPIFVDIDPATFNMAPDAAAAAITAKTK
HHHHHCCCCCCCEEEECHHHHHHHHHHHHCCCCEEEEEECCCEECCCCCHHHHHHHHCCC
AIVCVHQMGMPCDLEAIAAIGRRSGIPVIEDAACAIGSERLQGDVWRPIGSPAGDIACFS
EEEEEECCCCCCCHHHHHHHHHCCCCCEEHHHHHHHCHHHHCCCCCCCCCCCCCCEEEEE
FHPRKVLTTGDGGMITTASAAWDRTFRLLRQHGMSVSDIARHGSARVVVEEYAIAGFNYR
ECCCEEEEECCCCEEEECHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEEHHHHCCCCEE
MTDVQAAIGREQLKRLPDLIARRRALADGYRARLADLPGVTPPPEPMGLRSNWQSYCVRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHEEEC
PDDADQQAVMQAMLDRGIATRRGIMCAHLEPPYAEAPRRFALPESERARDHAILLPLYAA
CCCCCHHHHHHHHHHCCCHHHCCEEEEECCCCHHHCCCCCCCCCCCCCCCCEEHHHHHHH
MTEAEQDQVVDALRDALR
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA