Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

Click here to switch to the map view.

The map label for this gene is 170751006

Identifier: 170751006

GI number: 170751006

Start: 4912673

End: 4913473

Strand: Direct

Name: 170751006

Synonym: Mrad2831_4617

Alternate gene names: NA

Gene position: 4912673-4913473 (Clockwise)

Preceding gene: 170751005

Following gene: 170751007

Centisome position: 80.83

GC content: 74.66

Gene sequence:

>801_bases
ATGATCCCCGCACCGGTCAAGAGCCTCGCCCGGACGGTCGGCCTGACGCGCCCGCGCGTCGCCGCCGCCCGGATGGCCTG
CGAGCGCACGACGCTCGCCCTCGCCCGGATCCGGCGGCCGGCGCCGGGCGGCCGCATCCTCTGCTACCACTCGGTGGGCC
AGTCGGAATGCGGCGTCAACGACGTCTCTCCCGCGCGCTTCCGCCACCAGCTCGAGCGCGCGCTCGGGCTCGGCTACCGC
TTCGTGCCGGCGGCCACGATCGCCGACGGGCGCGGCGGCGCGCGGGACCTCGCCATCACCTTCGACGACGGCTGGCGCAG
CGTCCTCAGCGGGGCGGCGCCGGTCCTCAGCGATCTCGGGATCCCCTGGACCCTGTTCGTCGTGTCGGGCTGGCTCGACC
GGCCCGAGAGCGCGCCGCCCGGAATCCTGGGCTGGCGCGCCATCGAGGCGCTCGCGGCGAACGGGGTCGAGATCGGCAGC
CATTCCGTGACCCACCCGGATTTCGGGCGCCTCAGCGCGGAAGAGGCGGCCGAGGAGCTGGAGGAATCCCGGCGCGCCAT
CGGGGCCCGCCTTGGCGTCCTGCCCGACTCCTTCGCGATCCCCCTGGGGCAGTCGGCGAACTGGACGCGGGCGGCCGCCC
ACGCGGCCCGGGAGGCGGGCTACCGGATCGTCTACGCGCAGGCGGTGGAGACCCGTCCCGCCGGAACCGTGGCGCGCAGC
TTCGTCACGCAGTTCGACAACGATCTCGTCTTCGGTGCCCTGCTCCGGGGCGCCTACGACGCCTGGGAGGAGTGGGTATG
A

Upstream 100 bases:

>100_bases
CCGAGCGGGCGCGCGACCACGCGATCCTGCTGCCGCTCTACGCGGCGATGACGGAGGCGGAGCAGGATCAGGTCGTCGAC
GCCCTGCGCGACGCCCTGCG

Downstream 100 bases:

>100_bases
ACCGACCCGCGCAGCGCCGCGTCTCCGTCGTGGTGCCCACCTGCAACCGGCCCGCCTTCCTGCGCGAGGCCCTGGCGAGC
ATCCGCGCCCTGGAAGGCCC

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: Polysaccharide Deacetylase Family Protein

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MIPAPVKSLARTVGLTRPRVAAARMACERTTLALARIRRPAPGGRILCYHSVGQSECGVNDVSPARFRHQLERALGLGYR
FVPAATIADGRGGARDLAITFDDGWRSVLSGAAPVLSDLGIPWTLFVVSGWLDRPESAPPGILGWRAIEALAANGVEIGS
HSVTHPDFGRLSAEEAAEELEESRRAIGARLGVLPDSFAIPLGQSANWTRAAAHAAREAGYRIVYAQAVETRPAGTVARS
FVTQFDNDLVFGALLRGAYDAWEEWV

Sequences:

>Translated_266_residues
MIPAPVKSLARTVGLTRPRVAAARMACERTTLALARIRRPAPGGRILCYHSVGQSECGVNDVSPARFRHQLERALGLGYR
FVPAATIADGRGGARDLAITFDDGWRSVLSGAAPVLSDLGIPWTLFVVSGWLDRPESAPPGILGWRAIEALAANGVEIGS
HSVTHPDFGRLSAEEAAEELEESRRAIGARLGVLPDSFAIPLGQSANWTRAAAHAAREAGYRIVYAQAVETRPAGTVARS
FVTQFDNDLVFGALLRGAYDAWEEWV
>Mature_266_residues
MIPAPVKSLARTVGLTRPRVAAARMACERTTLALARIRRPAPGGRILCYHSVGQSECGVNDVSPARFRHQLERALGLGYR
FVPAATIADGRGGARDLAITFDDGWRSVLSGAAPVLSDLGIPWTLFVVSGWLDRPESAPPGILGWRAIEALAANGVEIGS
HSVTHPDFGRLSAEEAAEELEESRRAIGARLGVLPDSFAIPLGQSANWTRAAAHAAREAGYRIVYAQAVETRPAGTVARS
FVTQFDNDLVFGALLRGAYDAWEEWV

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28522; Mature: 28522

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPAPVKSLARTVGLTRPRVAAARMACERTTLALARIRRPAPGGRILCYHSVGQSECGVN
CCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCC
DVSPARFRHQLERALGLGYRFVPAATIADGRGGARDLAITFDDGWRSVLSGAAPVLSDLG
CCCHHHHHHHHHHHHCCCCEECCCCEEECCCCCCEEEEEEECHHHHHHHCCCHHHHHHCC
IPWTLFVVSGWLDRPESAPPGILGWRAIEALAANGVEIGSHSVTHPDFGRLSAEEAAEEL
CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCEECCCCCCCCCCCCCCCHHHHHHHH
EESRRAIGARLGVLPDSFAIPLGQSANWTRAAAHAAREAGYRIVYAQAVETRPAGTVARS
HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHH
FVTQFDNDLVFGALLRGAYDAWEEWV
HHHHHCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIPAPVKSLARTVGLTRPRVAAARMACERTTLALARIRRPAPGGRILCYHSVGQSECGVN
CCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCC
DVSPARFRHQLERALGLGYRFVPAATIADGRGGARDLAITFDDGWRSVLSGAAPVLSDLG
CCCHHHHHHHHHHHHCCCCEECCCCEEECCCCCCEEEEEEECHHHHHHHCCCHHHHHHCC
IPWTLFVVSGWLDRPESAPPGILGWRAIEALAANGVEIGSHSVTHPDFGRLSAEEAAEEL
CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCEECCCCCCCCCCCCCCCHHHHHHHH
EESRRAIGARLGVLPDSFAIPLGQSANWTRAAAHAAREAGYRIVYAQAVETRPAGTVARS
HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHH
FVTQFDNDLVFGALLRGAYDAWEEWV
HHHHHCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA