| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170751006
Identifier: 170751006
GI number: 170751006
Start: 4912673
End: 4913473
Strand: Direct
Name: 170751006
Synonym: Mrad2831_4617
Alternate gene names: NA
Gene position: 4912673-4913473 (Clockwise)
Preceding gene: 170751005
Following gene: 170751007
Centisome position: 80.83
GC content: 74.66
Gene sequence:
>801_bases ATGATCCCCGCACCGGTCAAGAGCCTCGCCCGGACGGTCGGCCTGACGCGCCCGCGCGTCGCCGCCGCCCGGATGGCCTG CGAGCGCACGACGCTCGCCCTCGCCCGGATCCGGCGGCCGGCGCCGGGCGGCCGCATCCTCTGCTACCACTCGGTGGGCC AGTCGGAATGCGGCGTCAACGACGTCTCTCCCGCGCGCTTCCGCCACCAGCTCGAGCGCGCGCTCGGGCTCGGCTACCGC TTCGTGCCGGCGGCCACGATCGCCGACGGGCGCGGCGGCGCGCGGGACCTCGCCATCACCTTCGACGACGGCTGGCGCAG CGTCCTCAGCGGGGCGGCGCCGGTCCTCAGCGATCTCGGGATCCCCTGGACCCTGTTCGTCGTGTCGGGCTGGCTCGACC GGCCCGAGAGCGCGCCGCCCGGAATCCTGGGCTGGCGCGCCATCGAGGCGCTCGCGGCGAACGGGGTCGAGATCGGCAGC CATTCCGTGACCCACCCGGATTTCGGGCGCCTCAGCGCGGAAGAGGCGGCCGAGGAGCTGGAGGAATCCCGGCGCGCCAT CGGGGCCCGCCTTGGCGTCCTGCCCGACTCCTTCGCGATCCCCCTGGGGCAGTCGGCGAACTGGACGCGGGCGGCCGCCC ACGCGGCCCGGGAGGCGGGCTACCGGATCGTCTACGCGCAGGCGGTGGAGACCCGTCCCGCCGGAACCGTGGCGCGCAGC TTCGTCACGCAGTTCGACAACGATCTCGTCTTCGGTGCCCTGCTCCGGGGCGCCTACGACGCCTGGGAGGAGTGGGTATG A
Upstream 100 bases:
>100_bases CCGAGCGGGCGCGCGACCACGCGATCCTGCTGCCGCTCTACGCGGCGATGACGGAGGCGGAGCAGGATCAGGTCGTCGAC GCCCTGCGCGACGCCCTGCG
Downstream 100 bases:
>100_bases ACCGACCCGCGCAGCGCCGCGTCTCCGTCGTGGTGCCCACCTGCAACCGGCCCGCCTTCCTGCGCGAGGCCCTGGCGAGC ATCCGCGCCCTGGAAGGCCC
Product: polysaccharide deacetylase
Products: NA
Alternate protein names: Polysaccharide Deacetylase Family Protein
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MIPAPVKSLARTVGLTRPRVAAARMACERTTLALARIRRPAPGGRILCYHSVGQSECGVNDVSPARFRHQLERALGLGYR FVPAATIADGRGGARDLAITFDDGWRSVLSGAAPVLSDLGIPWTLFVVSGWLDRPESAPPGILGWRAIEALAANGVEIGS HSVTHPDFGRLSAEEAAEELEESRRAIGARLGVLPDSFAIPLGQSANWTRAAAHAAREAGYRIVYAQAVETRPAGTVARS FVTQFDNDLVFGALLRGAYDAWEEWV
Sequences:
>Translated_266_residues MIPAPVKSLARTVGLTRPRVAAARMACERTTLALARIRRPAPGGRILCYHSVGQSECGVNDVSPARFRHQLERALGLGYR FVPAATIADGRGGARDLAITFDDGWRSVLSGAAPVLSDLGIPWTLFVVSGWLDRPESAPPGILGWRAIEALAANGVEIGS HSVTHPDFGRLSAEEAAEELEESRRAIGARLGVLPDSFAIPLGQSANWTRAAAHAAREAGYRIVYAQAVETRPAGTVARS FVTQFDNDLVFGALLRGAYDAWEEWV >Mature_266_residues MIPAPVKSLARTVGLTRPRVAAARMACERTTLALARIRRPAPGGRILCYHSVGQSECGVNDVSPARFRHQLERALGLGYR FVPAATIADGRGGARDLAITFDDGWRSVLSGAAPVLSDLGIPWTLFVVSGWLDRPESAPPGILGWRAIEALAANGVEIGS HSVTHPDFGRLSAEEAAEELEESRRAIGARLGVLPDSFAIPLGQSANWTRAAAHAAREAGYRIVYAQAVETRPAGTVARS FVTQFDNDLVFGALLRGAYDAWEEWV
Specific function: Unknown
COG id: COG0726
COG function: function code G; Predicted xylanase/chitin deacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28522; Mature: 28522
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPAPVKSLARTVGLTRPRVAAARMACERTTLALARIRRPAPGGRILCYHSVGQSECGVN CCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCC DVSPARFRHQLERALGLGYRFVPAATIADGRGGARDLAITFDDGWRSVLSGAAPVLSDLG CCCHHHHHHHHHHHHCCCCEECCCCEEECCCCCCEEEEEEECHHHHHHHCCCHHHHHHCC IPWTLFVVSGWLDRPESAPPGILGWRAIEALAANGVEIGSHSVTHPDFGRLSAEEAAEEL CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCEECCCCCCCCCCCCCCCHHHHHHHH EESRRAIGARLGVLPDSFAIPLGQSANWTRAAAHAAREAGYRIVYAQAVETRPAGTVARS HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHH FVTQFDNDLVFGALLRGAYDAWEEWV HHHHHCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIPAPVKSLARTVGLTRPRVAAARMACERTTLALARIRRPAPGGRILCYHSVGQSECGVN CCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCC DVSPARFRHQLERALGLGYRFVPAATIADGRGGARDLAITFDDGWRSVLSGAAPVLSDLG CCCHHHHHHHHHHHHCCCCEECCCCEEECCCCCCEEEEEEECHHHHHHHCCCHHHHHHCC IPWTLFVVSGWLDRPESAPPGILGWRAIEALAANGVEIGSHSVTHPDFGRLSAEEAAEEL CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCEECCCCCCCCCCCCCCCHHHHHHHH EESRRAIGARLGVLPDSFAIPLGQSANWTRAAAHAAREAGYRIVYAQAVETRPAGTVARS HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHH FVTQFDNDLVFGALLRGAYDAWEEWV HHHHHCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA