| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is hflK [H]
Identifier: 170750916
GI number: 170750916
Start: 4804812
End: 4805996
Strand: Direct
Name: hflK [H]
Synonym: Mrad2831_4527
Alternate gene names: 170750916
Gene position: 4804812-4805996 (Clockwise)
Preceding gene: 170750915
Following gene: 170750917
Centisome position: 79.05
GC content: 70.97
Gene sequence:
>1185_bases ATGCCTTGGAGCAATCAGAGCGGCGGCGGGGGCCCGTGGGGCCGGCCCGGCGGCAACGGCGGCGGTCCCTGGGGCGGTGG CGGTGGCGGCGGCAAGACGCCGCCGAACCTCGAGGACCTGCTCCGGCGCGGGCAGGACCGCCTGCGCGGCCTGATCCCGG GCGGCGGCGGCTCGGGCGGCGGCTACGGCGGCGGCGGCTCGACCGGCGTCGGCGGCGGCCGCAGCGCGGCGGTCATCGCC GTCCTGGCCATCGCCATCTGGCTCGCCACCGGTTTCTACACCGTCTACCCGCGCCAGGTCGGCATCGAGACGATCTTCGG CCGCTATGTCGGCACCAAGGGCGAGGGCCTGCGCTACAACTTCCCCTATCCGATCGGCGGCGTGGTGAAGCCGGATGTCG GCTCCCAGAACTCGATCCAGATCGGCTTCCGCGCCGGCCCGAACGGCCAGGGCCGCACCCGCGACGTGCCGGACGAGAGC CTGATGCTCACCGGTGACGAGAACATCGTCGATCTCGACTTCGAGGTGCAGTGGCGCGTCAACCCGCTGAAGGCTTCCGA CTTCGTGTTCAACCTCCAGAACCCGGAGGGCACCATCAAGGCGATCTCCGAGAGCGCGATGCGCGAGGTGATCGGCCGCC GCAACATCCAGGCGATCCTCACCAATGATCAGTCGAGCATCGCCCAGGAGGTGAAGGAGATGGTCCAGAAGGCGCTCGAC GAGTACGGCGCCGGCGTGCGCATCGAGGTGGTGCAGCTCGTCTCGGTCAACCCGCCGCCGGAGGTGCGCCCCGCCTTCAT CGACGTGAACGCGGCCCAGCAGGACGCCGACACGGCGCAGAACGAGGCCAAGACCTACGCCAGCCGCGAAGTGCCGCAGG CCCGCGGTAAGGCGTCCCAGATCGTCCAGCAGGCCGAGGCCTACCGGACGAAGGCGACCGCCGACGCCACCGGTCAGGCC GCGCGCTTCAGCGAGGTCTATGCCTCCTACAAGGCCGCCCCGGCGATCAGCCGCGAGCGGATCTTCCTGGAGACGATGGA GAAGGTCCTGGGCTCCGTGAACAAGGTGATCATCGACCAGAACGGGACGCAGCCCGGCGGCGCGACCGCGGCCGGCGTGC TGCCGGTGCTGCCGCTCTCCGAGTTCGGCGCCCGCGCCCAGACCCAGACGGGAGCCGCCCGATGA
Upstream 100 bases:
>100_bases TCCGGAGGGTCGGGACTAGGCGGGCGAGCGTGGCCGTTCAGGCAGGGGGCGCCGGCCGGGATATGGGCCGGGCGCGGACA GGCAGGAGACGACGGCTAGG
Downstream 100 bases:
>100_bases AGCAGGCTCTCCGCACCGGCCTGATCGTGGTCGCGGCGATCGTCGCGATCGGCCTCTACGCCTCGATCTTCACCGTCGGC CAGATGCAGCAGGCGCTCGT
Product: HflK protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MPWSNQSGGGGPWGRPGGNGGGPWGGGGGGGKTPPNLEDLLRRGQDRLRGLIPGGGGSGGGYGGGGSTGVGGGRSAAVIA VLAIAIWLATGFYTVYPRQVGIETIFGRYVGTKGEGLRYNFPYPIGGVVKPDVGSQNSIQIGFRAGPNGQGRTRDVPDES LMLTGDENIVDLDFEVQWRVNPLKASDFVFNLQNPEGTIKAISESAMREVIGRRNIQAILTNDQSSIAQEVKEMVQKALD EYGAGVRIEVVQLVSVNPPPEVRPAFIDVNAAQQDADTAQNEAKTYASREVPQARGKASQIVQQAEAYRTKATADATGQA ARFSEVYASYKAAPAISRERIFLETMEKVLGSVNKVIIDQNGTQPGGATAAGVLPVLPLSEFGARAQTQTGAAR
Sequences:
>Translated_394_residues MPWSNQSGGGGPWGRPGGNGGGPWGGGGGGGKTPPNLEDLLRRGQDRLRGLIPGGGGSGGGYGGGGSTGVGGGRSAAVIA VLAIAIWLATGFYTVYPRQVGIETIFGRYVGTKGEGLRYNFPYPIGGVVKPDVGSQNSIQIGFRAGPNGQGRTRDVPDES LMLTGDENIVDLDFEVQWRVNPLKASDFVFNLQNPEGTIKAISESAMREVIGRRNIQAILTNDQSSIAQEVKEMVQKALD EYGAGVRIEVVQLVSVNPPPEVRPAFIDVNAAQQDADTAQNEAKTYASREVPQARGKASQIVQQAEAYRTKATADATGQA ARFSEVYASYKAAPAISRERIFLETMEKVLGSVNKVIIDQNGTQPGGATAAGVLPVLPLSEFGARAQTQTGAAR >Mature_393_residues PWSNQSGGGGPWGRPGGNGGGPWGGGGGGGKTPPNLEDLLRRGQDRLRGLIPGGGGSGGGYGGGGSTGVGGGRSAAVIAV LAIAIWLATGFYTVYPRQVGIETIFGRYVGTKGEGLRYNFPYPIGGVVKPDVGSQNSIQIGFRAGPNGQGRTRDVPDESL MLTGDENIVDLDFEVQWRVNPLKASDFVFNLQNPEGTIKAISESAMREVIGRRNIQAILTNDQSSIAQEVKEMVQKALDE YGAGVRIEVVQLVSVNPPPEVRPAFIDVNAAQQDADTAQNEAKTYASREVPQARGKASQIVQQAEAYRTKATADATGQAA RFSEVYASYKAAPAISRERIFLETMEKVLGSVNKVIIDQNGTQPGGATAAGVLPVLPLSEFGARAQTQTGAAR
Specific function: HflC and HflK govern the stability of phage lambda cII protein and have been proposed to encode or regulate a cII- specific protease [H]
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family. HflK subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790616, Length=390, Percent_Identity=33.5897435897436, Blast_Score=171, Evalue=7e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR010201 - InterPro: IPR020980 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7; PF12221 HflK_N [H]
EC number: NA
Molecular weight: Translated: 41299; Mature: 41168
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWSNQSGGGGPWGRPGGNGGGPWGGGGGGGKTPPNLEDLLRRGQDRLRGLIPGGGGSGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCEECCCCCCCCC GYGGGGSTGVGGGRSAAVIAVLAIAIWLATGFYTVYPRQVGIETIFGRYVGTKGEGLRYN CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHCCCCCCCEEEE FPYPIGGVVKPDVGSQNSIQIGFRAGPNGQGRTRDVPDESLMLTGDENIVDLDFEVQWRV CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEEEE NPLKASDFVFNLQNPEGTIKAISESAMREVIGRRNIQAILTNDQSSIAQEVKEMVQKALD CCEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHH EYGAGVRIEVVQLVSVNPPPEVRPAFIDVNAAQQDADTAQNEAKTYASREVPQARGKASQ HHCCCCEEEEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCHHCCHHHH IVQQAEAYRTKATADATGQAARFSEVYASYKAAPAISRERIFLETMEKVLGSVNKVIIDQ HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEC NGTQPGGATAAGVLPVLPLSEFGARAQTQTGAAR CCCCCCCCCHHCHHHCCCHHHHCCCHHCCCCCCC >Mature Secondary Structure PWSNQSGGGGPWGRPGGNGGGPWGGGGGGGKTPPNLEDLLRRGQDRLRGLIPGGGGSGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCEECCCCCCCCC GYGGGGSTGVGGGRSAAVIAVLAIAIWLATGFYTVYPRQVGIETIFGRYVGTKGEGLRYN CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHCCCCCCCEEEE FPYPIGGVVKPDVGSQNSIQIGFRAGPNGQGRTRDVPDESLMLTGDENIVDLDFEVQWRV CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEEEE NPLKASDFVFNLQNPEGTIKAISESAMREVIGRRNIQAILTNDQSSIAQEVKEMVQKALD CCEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHH EYGAGVRIEVVQLVSVNPPPEVRPAFIDVNAAQQDADTAQNEAKTYASREVPQARGKASQ HHCCCCEEEEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCHHCCHHHH IVQQAEAYRTKATADATGQAARFSEVYASYKAAPAISRERIFLETMEKVLGSVNKVIIDQ HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEC NGTQPGGATAAGVLPVLPLSEFGARAQTQTGAAR CCCCCCCCCHHCHHHCCCHHHHCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]