Click here to switch to the map view.

The map label for this gene is ycgF [C]

Identifier: 170750800

GI number: 170750800

Start: 4679375

End: 4680304

Strand: Reverse

Name: ycgF [C]

Synonym: Mrad2831_4411

Alternate gene names: 170750800

Gene position: 4680304-4679375 (Counterclockwise)

Preceding gene: 170750801

Following gene: 170750799

Centisome position: 77.01

GC content: 77.96

Gene sequence:

>930_bases
ATGAGCGACCTCTACCGCCTCGTCTACGCCAGCAAGAACCTGCTCCAGGGCCCGGAGCCGGAGGCGATGGCCGCGGTCCG
GCAGATCCTGGACGCGTCCCGGCGGAACAACGCCGCGCTGGACGTGACCGGCGCCCTGATGTTCAACGCGGGCGCCTTCG
CGCAGGTGCTGGAGGGCCCGCGGCAGGGCGTCGAGGCGACCTTCGAGCGGATCCAGCGCGACCTGCGGCACGACGACGTC
ACGGTCCTGCAGTGCGGCCCGGCCGAGAGCCGCGGCTTCGCGAACTGGTCGATGGCGTTCGTGGGCGCGTCGCGCAGCGG
TCAGGCCCGTTTCAGCGGCCTCGCGACCGAGAGCGGGTTCGACCTCGCGCGGCTCGACGGCGACCGGGTCTTCGCCATGC
TGCACGGCCTCGTTCTCGAGGAGGAGGGCGTCCCGGCCGCCGAGACCGTCGCCGCCGCACCCGTCCCTCCGGAGACCGTC
CCCGAGCCGCGCGCGGCGTCCGGGCTCGACGTCGCGCAGGTGCGCGCCGAGATCGCGCGGCTGCGCCCGGAACCCGCGCC
GCCGGTCGCCGCGCCGCCTCTCGCGCCGCCGCCTGCCGCCCAGGACCGGACGCCGCCGGTCGAGCCGGCCCCGCGCCGGC
CGACCGGGACGCGCGGCGCGACCGAGGCCGCCCTCAGCGTGCTCAAGGCGGCGCTGGCGAGCGAGCGGCAGCGCACGACC
GACCTGCGGGTGGAGATCGACACCCTGCGCGTCGCGCTGGCCGCCTCCGAGGACCGCCTCGGGGCGCTGCGCGACGAGAG
GGACCTGTGGGCCGGGCGGGCCGGCCTGCTCGCCCGCGCCCTGGCGCAGGAGGCCGACGCTGTGTGCGCCGCCGCACCGG
CCGAGGCGGGCGACCGGCCCCCGGCGCGTCACGGGACCCGCGCCGCCTGA

Upstream 100 bases:

>100_bases
GGGCTACCTGATCAGCAAGCCCGTTCCCGCCGAGGACCTGCGCCAGGTCTTCGCCGCCTTCCCGCAGGCCTGACTCCCCG
CCCCTTCCGGACGCAAAGCC

Downstream 100 bases:

>100_bases
AACCGCCGCGGCGGGCGGGCGAAGAGGCGTCATCGTGACCGACTCCGAGGGACTCGATGACGCTGCTGCACGACCTCACG
GGCGCGCCCCCCGGCATGAC

Product: BLUF domain-containing protein

Products: NA

Alternate protein names: BLUF Domain Protein; Photopigment And Puc Activator; Sensors Of Blue-Light Using FAD; Sensors Of Blue-Light Using FAD Family; Activator Of Photopigment And Puc Expression; Bluf Domain Protein

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MSDLYRLVYASKNLLQGPEPEAMAAVRQILDASRRNNAALDVTGALMFNAGAFAQVLEGPRQGVEATFERIQRDLRHDDV
TVLQCGPAESRGFANWSMAFVGASRSGQARFSGLATESGFDLARLDGDRVFAMLHGLVLEEEGVPAAETVAAAPVPPETV
PEPRAASGLDVAQVRAEIARLRPEPAPPVAAPPLAPPPAAQDRTPPVEPAPRRPTGTRGATEAALSVLKAALASERQRTT
DLRVEIDTLRVALAASEDRLGALRDERDLWAGRAGLLARALAQEADAVCAAAPAEAGDRPPARHGTRAA

Sequences:

>Translated_309_residues
MSDLYRLVYASKNLLQGPEPEAMAAVRQILDASRRNNAALDVTGALMFNAGAFAQVLEGPRQGVEATFERIQRDLRHDDV
TVLQCGPAESRGFANWSMAFVGASRSGQARFSGLATESGFDLARLDGDRVFAMLHGLVLEEEGVPAAETVAAAPVPPETV
PEPRAASGLDVAQVRAEIARLRPEPAPPVAAPPLAPPPAAQDRTPPVEPAPRRPTGTRGATEAALSVLKAALASERQRTT
DLRVEIDTLRVALAASEDRLGALRDERDLWAGRAGLLARALAQEADAVCAAAPAEAGDRPPARHGTRAA
>Mature_308_residues
SDLYRLVYASKNLLQGPEPEAMAAVRQILDASRRNNAALDVTGALMFNAGAFAQVLEGPRQGVEATFERIQRDLRHDDVT
VLQCGPAESRGFANWSMAFVGASRSGQARFSGLATESGFDLARLDGDRVFAMLHGLVLEEEGVPAAETVAAAPVPPETVP
EPRAASGLDVAQVRAEIARLRPEPAPPVAAPPLAPPPAAQDRTPPVEPAPRRPTGTRGATEAALSVLKAALASERQRTTD
LRVEIDTLRVALAASEDRLGALRDERDLWAGRAGLLARALAQEADAVCAAAPAEAGDRPPARHGTRAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32573; Mature: 32442

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS50925 BLUF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLYRLVYASKNLLQGPEPEAMAAVRQILDASRRNNAALDVTGALMFNAGAFAQVLEGP
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHCCHHHHHHHHHH
RQGVEATFERIQRDLRHDDVTVLQCGPAESRGFANWSMAFVGASRSGQARFSGLATESGF
HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCCC
DLARLDGDRVFAMLHGLVLEEEGVPAAETVAAAPVPPETVPEPRAASGLDVAQVRAEIAR
CHHHCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
LRPEPAPPVAAPPLAPPPAAQDRTPPVEPAPRRPTGTRGATEAALSVLKAALASERQRTT
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
DLRVEIDTLRVALAASEDRLGALRDERDLWAGRAGLLARALAQEADAVCAAAPAEAGDRP
HHEEEHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PARHGTRAA
CCCCCCCCC
>Mature Secondary Structure 
SDLYRLVYASKNLLQGPEPEAMAAVRQILDASRRNNAALDVTGALMFNAGAFAQVLEGP
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHCCHHHHHHHHHH
RQGVEATFERIQRDLRHDDVTVLQCGPAESRGFANWSMAFVGASRSGQARFSGLATESGF
HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCCC
DLARLDGDRVFAMLHGLVLEEEGVPAAETVAAAPVPPETVPEPRAASGLDVAQVRAEIAR
CHHHCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
LRPEPAPPVAAPPLAPPPAAQDRTPPVEPAPRRPTGTRGATEAALSVLKAALASERQRTT
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
DLRVEIDTLRVALAASEDRLGALRDERDLWAGRAGLLARALAQEADAVCAAAPAEAGDRP
HHEEEHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PARHGTRAA
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA