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The map label for this gene is srpA [H]

Identifier: 170750799

GI number: 170750799

Start: 4678218

End: 4679318

Strand: Reverse

Name: srpA [H]

Synonym: Mrad2831_4410

Alternate gene names: 170750799

Gene position: 4679318-4678218 (Counterclockwise)

Preceding gene: 170750800

Following gene: 170750798

Centisome position: 76.99

GC content: 75.66

Gene sequence:

>1101_bases
ATGACGCTGCTGCACGACCTCACGGGCGCGCCCCCCGGCATGACCGGGCGCGCGCTGCTCCTGCGCCTGTCCGCCATCGG
CGCGGTGCTGGCCGGGACCGCCGGCACCTTCGCGTATGCCGGCGGCTGGCTCTCGCCCGGCCTGCTCACGCCGGCCCGGA
TCATCGACCGTTTCGAGCAGGTGAACGGGCCGCATCCCGGCTTCCGGCGCAATCACGCCAAGGGGATGTGCGTCGCGGGC
CGCTTCACGGGCAGCGGCGCGGGCGCGCGCCTGTCGAAGGCGGGCGTGTTCGCTGCGGGACGCGTGACGCCGGTCGAGGG
GCGGGTGGCGCTGGCCGGCGGACAGCCCTACGCGGCCGACGCCGCCGCCACCGTGCGCAGCCTCGCCCTGCGCTTCCGGC
TGCCGGACGGCGAGGAGTGGCGCACCGGCATGAACAACATCCCGGTCTTTCCGGTGCGCACGCCCGAGGCCTTCTACGCG
CAGCTCCTCGCGGCCAGGCCCGATCCCGCCACCGGCAAGCCGGATCCGGAGCGCCTGAAGGCCTTCTTCGCGGACCATCC
GGAGAGCGCGAAGGCCGCCGCGCTGATCAAGGCCCGGACCGTGACCGCGGGCTTCGCCGACAGCACCTACTGGAGCCTGA
ACGCCTTCCGGTTCGTCGCCGCGGACGGCGGCACCCGGCCGGTGCGCTGGGCCCTCGTCCCCGACCCGGTGCCGGCGGTC
GACGCCGCGCCGGGCGACCGGAACGCCCTGTTCGACGCGTTCGCCGCGCAGCTCGCGCAGAACCCGCGGCACTGGCACCT
GATCGTCACGCTCGGCCAGGCCGGCGACCCCACCGCCGACGCGACGCTGCCCTGGCCCGCCGACCGCGCGACGGTGGATG
TCGGCACCCTGACCCTCACGGCGGCGACGCCGGAGGCCGCCTCCACCTGCCGGGACATCAACTTCGATCCGCTGGTGCTG
CCGGACGGCATCGCGCCGAGCGACGACCCGCTGCTGAGCGCCCGGTCGGCGGCCTACGCGCAATCCGTCACCCGCCGCGC
CGGCGAGACCAAGACGCCGAGCGCCGTGACCGGGGCCGCCATCCACGGAGCCGCCCTGTGA

Upstream 100 bases:

>100_bases
CGGGCGACCGGCCCCCGGCGCGTCACGGGACCCGCGCCGCCTGAAACCGCCGCGGCGGGCGGGCGAAGAGGCGTCATCGT
GACCGACTCCGAGGGACTCG

Downstream 100 bases:

>100_bases
CGGAGACCGCCCGCTTCAACCGGCCCGCGCGCCTGCTCCACTGGACCATGGCGGCGCTGATCCTGGCGATGCTGCTCACC
GGCGCCGCCATGGTGACCTC

Product: catalase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MTLLHDLTGAPPGMTGRALLLRLSAIGAVLAGTAGTFAYAGGWLSPGLLTPARIIDRFEQVNGPHPGFRRNHAKGMCVAG
RFTGSGAGARLSKAGVFAAGRVTPVEGRVALAGGQPYAADAAATVRSLALRFRLPDGEEWRTGMNNIPVFPVRTPEAFYA
QLLAARPDPATGKPDPERLKAFFADHPESAKAAALIKARTVTAGFADSTYWSLNAFRFVAADGGTRPVRWALVPDPVPAV
DAAPGDRNALFDAFAAQLAQNPRHWHLIVTLGQAGDPTADATLPWPADRATVDVGTLTLTAATPEAASTCRDINFDPLVL
PDGIAPSDDPLLSARSAAYAQSVTRRAGETKTPSAVTGAAIHGAAL

Sequences:

>Translated_366_residues
MTLLHDLTGAPPGMTGRALLLRLSAIGAVLAGTAGTFAYAGGWLSPGLLTPARIIDRFEQVNGPHPGFRRNHAKGMCVAG
RFTGSGAGARLSKAGVFAAGRVTPVEGRVALAGGQPYAADAAATVRSLALRFRLPDGEEWRTGMNNIPVFPVRTPEAFYA
QLLAARPDPATGKPDPERLKAFFADHPESAKAAALIKARTVTAGFADSTYWSLNAFRFVAADGGTRPVRWALVPDPVPAV
DAAPGDRNALFDAFAAQLAQNPRHWHLIVTLGQAGDPTADATLPWPADRATVDVGTLTLTAATPEAASTCRDINFDPLVL
PDGIAPSDDPLLSARSAAYAQSVTRRAGETKTPSAVTGAAIHGAAL
>Mature_365_residues
TLLHDLTGAPPGMTGRALLLRLSAIGAVLAGTAGTFAYAGGWLSPGLLTPARIIDRFEQVNGPHPGFRRNHAKGMCVAGR
FTGSGAGARLSKAGVFAAGRVTPVEGRVALAGGQPYAADAAATVRSLALRFRLPDGEEWRTGMNNIPVFPVRTPEAFYAQ
LLAARPDPATGKPDPERLKAFFADHPESAKAAALIKARTVTAGFADSTYWSLNAFRFVAADGGTRPVRWALVPDPVPAVD
AAPGDRNALFDAFAAQLAQNPRHWHLIVTLGQAGDPTADATLPWPADRATVDVGTLTLTAATPEAASTCRDINFDPLVLP
DGIAPSDDPLLSARSAAYAQSVTRRAGETKTPSAVTGAAIHGAAL

Specific function: Unknown

COG id: COG0753

COG function: function code P; Catalase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the catalase family [H]

Homologues:

Organism=Homo sapiens, GI4557014, Length=296, Percent_Identity=27.7027027027027, Blast_Score=87, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI25147792, Length=294, Percent_Identity=26.1904761904762, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI25151141, Length=294, Percent_Identity=26.1904761904762, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI19920968, Length=320, Percent_Identity=25.3125, Blast_Score=80, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020835
- InterPro:   IPR018028
- InterPro:   IPR011614 [H]

Pfam domain/function: PF00199 Catalase [H]

EC number: NA

Molecular weight: Translated: 38049; Mature: 37918

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLHDLTGAPPGMTGRALLLRLSAIGAVLAGTAGTFAYAGGWLSPGLLTPARIIDRFEQ
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHH
VNGPHPGFRRNHAKGMCVAGRFTGSGAGARLSKAGVFAAGRVTPVEGRVALAGGQPYAAD
CCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHCCEEECCCCCCCCCEEEEECCCCCCHH
AAATVRSLALRFRLPDGEEWRTGMNNIPVFPVRTPEAFYAQLLAARPDPATGKPDPERLK
HHHHHHHHHHEEECCCCHHHHCCCCCCCEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHH
AFFADHPESAKAAALIKARTVTAGFADSTYWSLNAFRFVAADGGTRPVRWALVPDPVPAV
HHHHCCCCCCHHHHEEEEEEEECCCCCCCEEEEEEEEEEEECCCCCCEEEEECCCCCCCC
DAAPGDRNALFDAFAAQLAQNPRHWHLIVTLGQAGDPTADATLPWPADRATVDVGTLTLT
CCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECEEEEE
AATPEAASTCRDINFDPLVLPDGIAPSDDPLLSARSAAYAQSVTRRAGETKTPSAVTGAA
ECCCHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
IHGAAL
CCCCCC
>Mature Secondary Structure 
TLLHDLTGAPPGMTGRALLLRLSAIGAVLAGTAGTFAYAGGWLSPGLLTPARIIDRFEQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHH
VNGPHPGFRRNHAKGMCVAGRFTGSGAGARLSKAGVFAAGRVTPVEGRVALAGGQPYAAD
CCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHCCEEECCCCCCCCCEEEEECCCCCCHH
AAATVRSLALRFRLPDGEEWRTGMNNIPVFPVRTPEAFYAQLLAARPDPATGKPDPERLK
HHHHHHHHHHEEECCCCHHHHCCCCCCCEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHH
AFFADHPESAKAAALIKARTVTAGFADSTYWSLNAFRFVAADGGTRPVRWALVPDPVPAV
HHHHCCCCCCHHHHEEEEEEEECCCCCCCEEEEEEEEEEEECCCCCCEEEEECCCCCCCC
DAAPGDRNALFDAFAAQLAQNPRHWHLIVTLGQAGDPTADATLPWPADRATVDVGTLTLT
CCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECEEEEE
AATPEAASTCRDINFDPLVLPDGIAPSDDPLLSARSAAYAQSVTRRAGETKTPSAVTGAA
ECCCHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
IHGAAL
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7536734 [H]