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The map label for this gene is yccS [C]

Identifier: 170750520

GI number: 170750520

Start: 4381101

End: 4383326

Strand: Reverse

Name: yccS [C]

Synonym: Mrad2831_4127

Alternate gene names: 170750520

Gene position: 4383326-4381101 (Counterclockwise)

Preceding gene: 170750521

Following gene: 170750518

Centisome position: 72.12

GC content: 75.83

Gene sequence:

>2226_bases
ATGCCGGGGCGCCGCGCCCCCGTCGGGAGACCGAGCTTGACCGCGCCGAGTCCCACAGCCTCGCCCCCCGGACGTCTCCG
GCGGCGCCGCCTCGCGGCCGGCCGGGGCAGCCTGAGCCGGCCCGGCGGCGACCTGCGGCGCCTGCCCACGGGTCTCGATC
TCCGGAACGTGCGTCTCGTGGAGGGCGTGCGCGCCGCCTTCGCGTTCGGCGTCGTCATCCTCCTCAACATCTGGATCCAG
TGGTCGCCGCTGCTGACCATGGCGCTCGCCGCCAACCTCGCCTGCTTCTGCGACAACGGCGGCCCGATGCGCGCGCGCCT
GCGCGTCCTCACCGCCTTCTCGTTCCTCGGCGGCCTGCTCTGGGCCGGCCTCGGCCTGATCCAGCCCCTCGGCCTGCCGG
TGGTCGTCCCGGTCGCCTGCGCGCTGATCTTCGCCTGCTCGTACGCGCGCGTCTGGAGCGTGCAGGCCCAGTCGGTCGGC
AACGTGCTCGTGGTGGTGCTGTGCATCGCCCTCGACCGGCCGCTCGACGGGGCGCAGGCGGCCGTCACCGCGGCGATGTT
CGCGGCCGGCGGTCTCTGGGCGACATTCCTGGCCCTGGTCATCTGGCGGCTGCACCCGTACCGCCCGGCCCACCGGGCCG
TGGCGGAGGTCTGGCACAACCTCGCCCGGCTCTGCGGCGACCTCGAGCGGCTCGTCGCCCTGCCGGAGCCCGACACGGCC
GCCTTCGACGGCCACGCGCGGGGCCACCGGCGCGGCGTGCGGGCGAGCATCGAGACCGCCCGGACCATGATCCTCGACCT
CGCCCGCTCCCGCGAGCGCGTCTCCGACCGCACCGCCCAGGCCCTGCTGCGTCTGGAGAGCGCCGAGCAGATCTTCGCCG
CCCTGATCGCCGTGGGCGAACTGATCGACAGCCGCCCCGACGCGCGCCGCCGGGCGCTCGCCAAGGTGTTCCTGCGGCGC
CTGCGCCCCCTGCTGGTGACCATCGCCCGGGCGATCCGCGACGACGTCAACCTCGACCTCGCCCGCCTGGAGCACTCCAT
CGCCCGGGTGGCCGAGGGCCTGTCGGAGGACCCGACCCTGGCCCGCCTCGCCGACCGGATCGTCGGGCGCGTGCGGATCG
GCGCCAAGCTGTCGACGCCGGACGGCTACCGGCCCGGCGGCACGATCACGGAGGGCGGCAGCCTCGACCGCTGGACCCGC
TACGTCGGGCCGCTGGCGCAGAACTTCACCCTGGCCTCGCCCAACCTGCGGCACGCCCTGCGGGCGAGCGCGGTCGCGGC
GCCGGCGCTCGCCGCGACCCTGACCTACGCGGGCGCCTTCACGCACTGGCTGGTGATGACCGTGGTGCTCACCATGCAGC
CCTTCTACGCGGCGACGTGGCAGCGGGCGCTGGAGCGGATCGGCGGCACGGTGCTGGGCGGCCTCGTGGGCGCCGTGCTC
GCCTACTACGCCACGAGCCCGCTGGCGGAGGCCGGGCTGATCCTGGTGCTCAGCATCGTCGGCTTCGCGGCGCGCCAGAT
CTCCTACGGCTTCTTCGTCACCTGCCTGACGCCCCTCGTGGTGCTGCTCGTCGAACTGCTGGAGCCCGGCCACAGCTCCT
GGGAGATCGTCGCCATGCGGGGCGGCTTCACGGTGCTGGGCGGCGTGATCGCGGTGGCGAGCTGCCTGGTGCTCTGGCCG
ATCTGGGAGCCCGATCAGGTCCGGCAGGAACTGCGCCGGGCGCTCAGGGCGCAGGCCGGCCTCGCCGAGGCGGTGCTCCG
CGCGCCGCCCGGCGAGGGCCGCGAGACCGCGATCGCGGCGCAGAGCCGCGAGGCCGGCCTCGCCCTCAACGATCTGGAAG
CGGCGCTGTCCCGCGCCCTGCAGCAGCCCCGGGCCGGCAGCCACCCGGAGGTGGAATCCGCCCTGGTGGCCGACGCGACC
CTGCGCCGGATCAGCGCCCGGCTCATCGTCCTGCGGCACGCCCCGGAGGCGGCCGCCCCCGAGGCGGAGCCTTGGCGGGC
CTGGATCAGCGCGACCCTGGCGGCCCTGGGTGCCGACAGGCCCGTGCCCGAGCGGCCCGCGCTGGATCGCGGGCAATCGC
TCGTGCGCCTCGTCAGTCAGGTCGATCTTCTGGTCGGGACCCTGCGCCCCGGGGAGATCCGGGCCGCGGCGGGGGACGAT
GGCGGGGCGCCGGAGACCGGGCGCGGGGCCGACGCGCGCGCGGGCCAGCCGGTCCTGCCGTCCTGA

Upstream 100 bases:

>100_bases
GTGATGCGCAACGCTGCGCTGCACGCGCCCCGCGATCCCGCGCCGGCCGCGGGCCGGGGTTGCGCGCTGCCGCGGATCCG
GTCAGGCCGGAGCGCGGTTC

Downstream 100 bases:

>100_bases
CGGACGGGCCTGCCGAGCCCCGCGCGAGGGCCGGTCCCGCGGCGTTCCCGCGGGCCCGGTCTCCCGTCAGAACCGCGGCA
GGGCGTTGGCCGGGCCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 741; Mature: 740

Protein sequence:

>741_residues
MPGRRAPVGRPSLTAPSPTASPPGRLRRRRLAAGRGSLSRPGGDLRRLPTGLDLRNVRLVEGVRAAFAFGVVILLNIWIQ
WSPLLTMALAANLACFCDNGGPMRARLRVLTAFSFLGGLLWAGLGLIQPLGLPVVVPVACALIFACSYARVWSVQAQSVG
NVLVVVLCIALDRPLDGAQAAVTAAMFAAGGLWATFLALVIWRLHPYRPAHRAVAEVWHNLARLCGDLERLVALPEPDTA
AFDGHARGHRRGVRASIETARTMILDLARSRERVSDRTAQALLRLESAEQIFAALIAVGELIDSRPDARRRALAKVFLRR
LRPLLVTIARAIRDDVNLDLARLEHSIARVAEGLSEDPTLARLADRIVGRVRIGAKLSTPDGYRPGGTITEGGSLDRWTR
YVGPLAQNFTLASPNLRHALRASAVAAPALAATLTYAGAFTHWLVMTVVLTMQPFYAATWQRALERIGGTVLGGLVGAVL
AYYATSPLAEAGLILVLSIVGFAARQISYGFFVTCLTPLVVLLVELLEPGHSSWEIVAMRGGFTVLGGVIAVASCLVLWP
IWEPDQVRQELRRALRAQAGLAEAVLRAPPGEGRETAIAAQSREAGLALNDLEAALSRALQQPRAGSHPEVESALVADAT
LRRISARLIVLRHAPEAAAPEAEPWRAWISATLAALGADRPVPERPALDRGQSLVRLVSQVDLLVGTLRPGEIRAAAGDD
GGAPETGRGADARAGQPVLPS

Sequences:

>Translated_741_residues
MPGRRAPVGRPSLTAPSPTASPPGRLRRRRLAAGRGSLSRPGGDLRRLPTGLDLRNVRLVEGVRAAFAFGVVILLNIWIQ
WSPLLTMALAANLACFCDNGGPMRARLRVLTAFSFLGGLLWAGLGLIQPLGLPVVVPVACALIFACSYARVWSVQAQSVG
NVLVVVLCIALDRPLDGAQAAVTAAMFAAGGLWATFLALVIWRLHPYRPAHRAVAEVWHNLARLCGDLERLVALPEPDTA
AFDGHARGHRRGVRASIETARTMILDLARSRERVSDRTAQALLRLESAEQIFAALIAVGELIDSRPDARRRALAKVFLRR
LRPLLVTIARAIRDDVNLDLARLEHSIARVAEGLSEDPTLARLADRIVGRVRIGAKLSTPDGYRPGGTITEGGSLDRWTR
YVGPLAQNFTLASPNLRHALRASAVAAPALAATLTYAGAFTHWLVMTVVLTMQPFYAATWQRALERIGGTVLGGLVGAVL
AYYATSPLAEAGLILVLSIVGFAARQISYGFFVTCLTPLVVLLVELLEPGHSSWEIVAMRGGFTVLGGVIAVASCLVLWP
IWEPDQVRQELRRALRAQAGLAEAVLRAPPGEGRETAIAAQSREAGLALNDLEAALSRALQQPRAGSHPEVESALVADAT
LRRISARLIVLRHAPEAAAPEAEPWRAWISATLAALGADRPVPERPALDRGQSLVRLVSQVDLLVGTLRPGEIRAAAGDD
GGAPETGRGADARAGQPVLPS
>Mature_740_residues
PGRRAPVGRPSLTAPSPTASPPGRLRRRRLAAGRGSLSRPGGDLRRLPTGLDLRNVRLVEGVRAAFAFGVVILLNIWIQW
SPLLTMALAANLACFCDNGGPMRARLRVLTAFSFLGGLLWAGLGLIQPLGLPVVVPVACALIFACSYARVWSVQAQSVGN
VLVVVLCIALDRPLDGAQAAVTAAMFAAGGLWATFLALVIWRLHPYRPAHRAVAEVWHNLARLCGDLERLVALPEPDTAA
FDGHARGHRRGVRASIETARTMILDLARSRERVSDRTAQALLRLESAEQIFAALIAVGELIDSRPDARRRALAKVFLRRL
RPLLVTIARAIRDDVNLDLARLEHSIARVAEGLSEDPTLARLADRIVGRVRIGAKLSTPDGYRPGGTITEGGSLDRWTRY
VGPLAQNFTLASPNLRHALRASAVAAPALAATLTYAGAFTHWLVMTVVLTMQPFYAATWQRALERIGGTVLGGLVGAVLA
YYATSPLAEAGLILVLSIVGFAARQISYGFFVTCLTPLVVLLVELLEPGHSSWEIVAMRGGFTVLGGVIAVASCLVLWPI
WEPDQVRQELRRALRAQAGLAEAVLRAPPGEGRETAIAAQSREAGLALNDLEAALSRALQQPRAGSHPEVESALVADATL
RRISARLIVLRHAPEAAAPEAEPWRAWISATLAALGADRPVPERPALDRGQSLVRLVSQVDLLVGTLRPGEIRAAAGDDG
GAPETGRGADARAGQPVLPS

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yccS/yhfK family [H]

Homologues:

Organism=Escherichia coli, GI87081808, Length=303, Percent_Identity=26.4026402640264, Blast_Score=71, Evalue=3e-13,
Organism=Escherichia coli, GI87082248, Length=246, Percent_Identity=26.8292682926829, Blast_Score=67, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010019
- InterPro:   IPR010020 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79148; Mature: 79017

Theoretical pI: Translated: 11.14; Mature: 11.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGRRAPVGRPSLTAPSPTASPPGRLRRRRLAAGRGSLSRPGGDLRRLPTGLDLRNVRLV
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHHH
EGVRAAFAFGVVILLNIWIQWSPLLTMALAANLACFCDNGGPMRARLRVLTAFSFLGGLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHH
WAGLGLIQPLGLPVVVPVACALIFACSYARVWSVQAQSVGNVLVVVLCIALDRPLDGAQA
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
AVTAAMFAAGGLWATFLALVIWRLHPYRPAHRAVAEVWHNLARLCGDLERLVALPEPDTA
HHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
AFDGHARGHRRGVRASIETARTMILDLARSRERVSDRTAQALLRLESAEQIFAALIAVGE
CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIDSRPDARRRALAKVFLRRLRPLLVTIARAIRDDVNLDLARLEHSIARVAEGLSEDPTL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHH
ARLADRIVGRVRIGAKLSTPDGYRPGGTITEGGSLDRWTRYVGPLAQNFTLASPNLRHAL
HHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHH
RASAVAAPALAATLTYAGAFTHWLVMTVVLTMQPFYAATWQRALERIGGTVLGGLVGAVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHHHHHHHH
AYYATSPLAEAGLILVLSIVGFAARQISYGFFVTCLTPLVVLLVELLEPGHSSWEIVAMR
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC
GGFTVLGGVIAVASCLVLWPIWEPDQVRQELRRALRAQAGLAEAVLRAPPGEGRETAIAA
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
QSREAGLALNDLEAALSRALQQPRAGSHPEVESALVADATLRRISARLIVLRHAPEAAAP
CCHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCC
EAEPWRAWISATLAALGADRPVPERPALDRGQSLVRLVSQVDLLVGTLRPGEIRAAAGDD
CCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
GGAPETGRGADARAGQPVLPS
CCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PGRRAPVGRPSLTAPSPTASPPGRLRRRRLAAGRGSLSRPGGDLRRLPTGLDLRNVRLV
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHHH
EGVRAAFAFGVVILLNIWIQWSPLLTMALAANLACFCDNGGPMRARLRVLTAFSFLGGLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHH
WAGLGLIQPLGLPVVVPVACALIFACSYARVWSVQAQSVGNVLVVVLCIALDRPLDGAQA
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
AVTAAMFAAGGLWATFLALVIWRLHPYRPAHRAVAEVWHNLARLCGDLERLVALPEPDTA
HHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
AFDGHARGHRRGVRASIETARTMILDLARSRERVSDRTAQALLRLESAEQIFAALIAVGE
CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIDSRPDARRRALAKVFLRRLRPLLVTIARAIRDDVNLDLARLEHSIARVAEGLSEDPTL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHH
ARLADRIVGRVRIGAKLSTPDGYRPGGTITEGGSLDRWTRYVGPLAQNFTLASPNLRHAL
HHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHH
RASAVAAPALAATLTYAGAFTHWLVMTVVLTMQPFYAATWQRALERIGGTVLGGLVGAVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHHHHHHHH
AYYATSPLAEAGLILVLSIVGFAARQISYGFFVTCLTPLVVLLVELLEPGHSSWEIVAMR
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC
GGFTVLGGVIAVASCLVLWPIWEPDQVRQELRRALRAQAGLAEAVLRAPPGEGRETAIAA
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
QSREAGLALNDLEAALSRALQQPRAGSHPEVESALVADATLRRISARLIVLRHAPEAAAP
CCHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCC
EAEPWRAWISATLAALGADRPVPERPALDRGQSLVRLVSQVDLLVGTLRPGEIRAAAGDD
CCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
GGAPETGRGADARAGQPVLPS
CCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]