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The map label for this gene is xynZ [H]

Identifier: 170750304

GI number: 170750304

Start: 4155788

End: 4156966

Strand: Direct

Name: xynZ [H]

Synonym: Mrad2831_3907

Alternate gene names: 170750304

Gene position: 4155788-4156966 (Clockwise)

Preceding gene: 170750300

Following gene: 170750306

Centisome position: 68.38

GC content: 73.96

Gene sequence:

>1179_bases
ATGTCCCCTCCCCCGAGCCGCCGATCGATCCTCGCGGGCGCGGCCTCCCTCGGCCTCGCCGGCACGGCGCGCGCGGCCGG
CCCGGCGGGGTTCGGTCCCCTCGGCCGGCCGTCCTGGTCGGCCGACAGCCTCCAGGCCGCAGCGGCCGCCAAGGGCCTGA
CATACGGCTGCGAGGTGCCGTTCCACCGCTTCGACGCGACGCCCGCCTACCGGGAGGCGGTGGCGCGGGAATGCGGCATC
CTCGTCTGCGGCACCGAGATGAAGATGGAGGAGGTCCTGCCGGCGCCCGGCAGGACCGACTTCGCCCGCGGCGACGCGAT
CCTGCGCTTCGCCAGGGGGAACGGCCAGCGCATGCGCGGCCACACGCTCGTCTGGCACGCGGCGCTGCCGCCCTGGGTCG
GGCCGCTGCTCGGCCGGGCGAGCGCCGTCCAGGCCGAGGATTTCATGCGGCGCTGGATCGAGACGGTGGCGGGCCACTAT
CGCGGCCAGATCGTCGCCTGGGACGTGGTCAACGAGATCCTCGGCAACGAGGCCGATCCCGACCGCGGCGGCGGCCTGCG
CGACTCGCCCTGGCTCGCCTCGATCGGACCCGGCTACGTCGACCTCGCCTTCCGGATCCTCCACGAGACCGACCCCGCGG
CCGCCGGCACCTGGAACGAGGACGCGGTGGAGCAGGGCGTGCCCTGGATGGAGGCCAAGCGCACCAAGGTCCTGCGCCGC
CTGGAGGCGATGCGGTCCCGCGGCGTGCCGATCCGGCGCTTCGGGCTCCAGTCGCACCTCACCAGCACGATCCCGATCGA
CCAGGGCCAGCTGCGGCGCTTCCTGCGGGAGATCGGCCAGATGGGACTCGGGATCGAGATCACCGAACTCGACATCGACG
ACCGCGCCTTCCCGTCCGACGTGGCGACCCGCGACCGGATGGTGGCCGACTACGCCCGGCGCTACCTCGACGCGGTGCTG
GACGAGCCCGCCTGCCTCGACGTCCTGACCTGGGACATCTACGACCCGGACACGTGGCTGAACGACCATCCCTACCGCAA
GCGGCCCGACGGCCTGCCGCAGCGGGCCCTGCCGCTCGACGCGCAGTTCCGGCGCAAGCCCCTGTGGCACGCCATGAAGG
CGGCCTTCGCGGCCGCGCCGGATCACAGGGCCGCCCGCGACAGGCTCAGGCGGGCGTGA

Upstream 100 bases:

>100_bases
CGCGTCCCGATCCTGGCCCCGGCCCCGGCAGTACCAGCGGATCGCCGCCCCGGCGGCGTCTGCTAGGGTGGCGGGCCCCC
CTGCGGAACGAAGCACCCGG

Downstream 100 bases:

>100_bases
TCCCGGCCCGCCGGCCGTCCTCGGCCAGGCTCGGCTCCGGCGGCCGGTCCGCCAGCAGCCGGCGGCGGAGGCGCGCGCAG
GGGCGCTCGACGAGCCCGTA

Product: endo-1,4-beta-xylanase

Products: NA

Alternate protein names: Xylanase Z; 1,4-beta-D-xylan xylanohydrolase Z [H]

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MSPPPSRRSILAGAASLGLAGTARAAGPAGFGPLGRPSWSADSLQAAAAAKGLTYGCEVPFHRFDATPAYREAVARECGI
LVCGTEMKMEEVLPAPGRTDFARGDAILRFARGNGQRMRGHTLVWHAALPPWVGPLLGRASAVQAEDFMRRWIETVAGHY
RGQIVAWDVVNEILGNEADPDRGGGLRDSPWLASIGPGYVDLAFRILHETDPAAAGTWNEDAVEQGVPWMEAKRTKVLRR
LEAMRSRGVPIRRFGLQSHLTSTIPIDQGQLRRFLREIGQMGLGIEITELDIDDRAFPSDVATRDRMVADYARRYLDAVL
DEPACLDVLTWDIYDPDTWLNDHPYRKRPDGLPQRALPLDAQFRRKPLWHAMKAAFAAAPDHRAARDRLRRA

Sequences:

>Translated_392_residues
MSPPPSRRSILAGAASLGLAGTARAAGPAGFGPLGRPSWSADSLQAAAAAKGLTYGCEVPFHRFDATPAYREAVARECGI
LVCGTEMKMEEVLPAPGRTDFARGDAILRFARGNGQRMRGHTLVWHAALPPWVGPLLGRASAVQAEDFMRRWIETVAGHY
RGQIVAWDVVNEILGNEADPDRGGGLRDSPWLASIGPGYVDLAFRILHETDPAAAGTWNEDAVEQGVPWMEAKRTKVLRR
LEAMRSRGVPIRRFGLQSHLTSTIPIDQGQLRRFLREIGQMGLGIEITELDIDDRAFPSDVATRDRMVADYARRYLDAVL
DEPACLDVLTWDIYDPDTWLNDHPYRKRPDGLPQRALPLDAQFRRKPLWHAMKAAFAAAPDHRAARDRLRRA
>Mature_391_residues
SPPPSRRSILAGAASLGLAGTARAAGPAGFGPLGRPSWSADSLQAAAAAKGLTYGCEVPFHRFDATPAYREAVARECGIL
VCGTEMKMEEVLPAPGRTDFARGDAILRFARGNGQRMRGHTLVWHAALPPWVGPLLGRASAVQAEDFMRRWIETVAGHYR
GQIVAWDVVNEILGNEADPDRGGGLRDSPWLASIGPGYVDLAFRILHETDPAAAGTWNEDAVEQGVPWMEAKRTKVLRRL
EAMRSRGVPIRRFGLQSHLTSTIPIDQGQLRRFLREIGQMGLGIEITELDIDDRAFPSDVATRDRMVADYARRYLDAVLD
EPACLDVLTWDIYDPDTWLNDHPYRKRPDGLPQRALPLDAQFRRKPLWHAMKAAFAAAPDHRAARDRLRRA

Specific function: Unknown

COG id: COG3693

COG function: function code G; Beta-1,4-xylanase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CBM6 (carbohydrate binding type-6) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005084
- InterPro:   IPR016134
- InterPro:   IPR002105
- InterPro:   IPR006584
- InterPro:   IPR018242
- InterPro:   IPR018247
- InterPro:   IPR000801
- InterPro:   IPR008979
- InterPro:   IPR001000
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF03422 CBM_6; PF00404 Dockerin_1; PF00756 Esterase; PF00331 Glyco_hydro_10 [H]

EC number: =3.2.1.8 [H]

Molecular weight: Translated: 43335; Mature: 43204

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: PS00591 GLYCOSYL_HYDROL_F10

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPPPSRRSILAGAASLGLAGTARAAGPAGFGPLGRPSWSADSLQAAAAAKGLTYGCEVP
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
FHRFDATPAYREAVARECGILVCGTEMKMEEVLPAPGRTDFARGDAILRFARGNGQRMRG
HHHCCCCHHHHHHHHHHCCEEEECCCCCHHHHCCCCCCCCCCCCCCEEEEECCCCCEECC
HTLVWHAALPPWVGPLLGRASAVQAEDFMRRWIETVAGHYRGQIVAWDVVNEILGNEADP
CEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCCC
DRGGGLRDSPWLASIGPGYVDLAFRILHETDPAAAGTWNEDAVEQGVPWMEAKRTKVLRR
CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHH
LEAMRSRGVPIRRFGLQSHLTSTIPIDQGQLRRFLREIGQMGLGIEITELDIDDRAFPSD
HHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHH
VATRDRMVADYARRYLDAVLDEPACLDVLTWDIYDPDTWLNDHPYRKRPDGLPQRALPLD
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AQFRRKPLWHAMKAAFAAAPDHRAARDRLRRA
HHHHHCHHHHHHHHHHHCCCCHHHHHHHHHCC
>Mature Secondary Structure 
SPPPSRRSILAGAASLGLAGTARAAGPAGFGPLGRPSWSADSLQAAAAAKGLTYGCEVP
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
FHRFDATPAYREAVARECGILVCGTEMKMEEVLPAPGRTDFARGDAILRFARGNGQRMRG
HHHCCCCHHHHHHHHHHCCEEEECCCCCHHHHCCCCCCCCCCCCCCEEEEECCCCCEECC
HTLVWHAALPPWVGPLLGRASAVQAEDFMRRWIETVAGHYRGQIVAWDVVNEILGNEADP
CEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCCC
DRGGGLRDSPWLASIGPGYVDLAFRILHETDPAAAGTWNEDAVEQGVPWMEAKRTKVLRR
CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHH
LEAMRSRGVPIRRFGLQSHLTSTIPIDQGQLRRFLREIGQMGLGIEITELDIDDRAFPSD
HHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHH
VATRDRMVADYARRYLDAVLDEPACLDVLTWDIYDPDTWLNDHPYRKRPDGLPQRALPLD
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AQFRRKPLWHAMKAAFAAAPDHRAARDRLRRA
HHHHHCHHHHHHHHHHHCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3139632; 7664125 [H]