| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170750188
Identifier: 170750188
GI number: 170750188
Start: 4031064
End: 4031879
Strand: Direct
Name: 170750188
Synonym: Mrad2831_3790
Alternate gene names: NA
Gene position: 4031064-4031879 (Clockwise)
Preceding gene: 170750185
Following gene: 170750189
Centisome position: 66.32
GC content: 73.65
Gene sequence:
>816_bases ATGAACCCAGCCCGTTTCGCCGTCCTCGGTATCGCCCTCGCGGCGGGGACCGGGGCGGCCTTCCTGATGAGCGGCGGCGA CCCGCCACCGCCGCCACCGCCGCCGGCGGCCGAGGCGCCGCCGCAGCCGACGACCGACGTGCTCGTGGCCGCCATCGACA TGCCCATGGGCCAGGTGCTCCGGGCCGCGGACCTGCGCTGGCAGCCCTGGCCGGACGGCGCCGTGGCCAACGGCTACATG ACCCGCAAGATCAACCCCAAGGCCCTCGAGGAGACCGTGGGCGCGTCCGTGCGCTCGGGCTTCCTGACGGGCGAGCCGAT CCGCGCCCAGAAGCTGGTGCGCCCGGAGAGCGGCTTCATGGCGGCGATCCTGCCGCCCGGCATGCGCGCGGTCGCCATCG TCACCGACAGCCGCGGCACCAACTCGGCCGGCGGCTTCATCCTGCCGAACGACCGCGTCGACGTGATCCGCACCTTCCGC GACGAGTCCAATTCTCGGGCCAACAACAGCGACGTGCAGCTCTCCCAGACGATCCTGACCGACATCCGCGTCCTGGCGAT CGGTCAGCTGGTCCAGGAGAAGAACGGCACCAACGTCGTCACCGGCGAGACCGCGACGCTGGCCGTCACGCCCGCGCAGG CCGAGACCCTGGCGCTCGCCCAGAAGGTCGGCGCCCTGACCCTCTCCCTGCGCAGCCTCGCCGACGCCGGGCGCCCGCCC GAGGCCACGCCGCTGGCCGAAGCGTCCGCCGCGCAGATGCCCGAACCCGCCCTGACCGTGGTGCGCTTCGGCGTCGCGCG GCAGCAGACGCCGTGA
Upstream 100 bases:
>100_bases AACGGCAGAGGTTATAATACCTTAACCATAATTACACGAATCCCCGCGCAGGTTCCGGTCATGGACGGCAATCCGGCCGT CTCCGGCGCGTGGCGATGCG
Downstream 100 bases:
>100_bases CCGCCATGATCGCTCCGCCGCCCGCTTCACTGCCCGACGCCCGCGCGCTGCGGCGCCCCGACCGCGGCCCGCGCCGCCGC TCGGCCGGCGCCCTCGCCCT
Product: Flp pilus assembly protein CpaB
Products: NA
Alternate protein names: Flp Pilus Assembly CpaB; SAF Domain-Containing Protein; Pilus Assembly Protein CpaB; Pilus Assembly Protein; Pilus Assembly Transmembrane Protein; Flp Pilus Assembly Protein; CtpC Protein; Flp Pilus Assembly Protein Cpab; Flp Pilus Assembly Protein RcpC/CpaB; CpaB Pilus Assembly Protein; Pilus Assembly-Related Exported Protein; Fimbriae-Assembly Related Protein; CpaB2 Pilus Assembly Protein; CpaB2 Flp Pilus Assembly Protein CpaB; Component Of Type IV Pilus; Flp Pilus Assembly Protein CpaB-Like Protein; Components Of Type IV Pilus
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MNPARFAVLGIALAAGTGAAFLMSGGDPPPPPPPPAAEAPPQPTTDVLVAAIDMPMGQVLRAADLRWQPWPDGAVANGYM TRKINPKALEETVGASVRSGFLTGEPIRAQKLVRPESGFMAAILPPGMRAVAIVTDSRGTNSAGGFILPNDRVDVIRTFR DESNSRANNSDVQLSQTILTDIRVLAIGQLVQEKNGTNVVTGETATLAVTPAQAETLALAQKVGALTLSLRSLADAGRPP EATPLAEASAAQMPEPALTVVRFGVARQQTP
Sequences:
>Translated_271_residues MNPARFAVLGIALAAGTGAAFLMSGGDPPPPPPPPAAEAPPQPTTDVLVAAIDMPMGQVLRAADLRWQPWPDGAVANGYM TRKINPKALEETVGASVRSGFLTGEPIRAQKLVRPESGFMAAILPPGMRAVAIVTDSRGTNSAGGFILPNDRVDVIRTFR DESNSRANNSDVQLSQTILTDIRVLAIGQLVQEKNGTNVVTGETATLAVTPAQAETLALAQKVGALTLSLRSLADAGRPP EATPLAEASAAQMPEPALTVVRFGVARQQTP >Mature_271_residues MNPARFAVLGIALAAGTGAAFLMSGGDPPPPPPPPAAEAPPQPTTDVLVAAIDMPMGQVLRAADLRWQPWPDGAVANGYM TRKINPKALEETVGASVRSGFLTGEPIRAQKLVRPESGFMAAILPPGMRAVAIVTDSRGTNSAGGFILPNDRVDVIRTFR DESNSRANNSDVQLSQTILTDIRVLAIGQLVQEKNGTNVVTGETATLAVTPAQAETLALAQKVGALTLSLRSLADAGRPP EATPLAEASAAQMPEPALTVVRFGVARQQTP
Specific function: Unknown
COG id: COG3745
COG function: function code U; Flp pilus assembly protein CpaB
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28180; Mature: 28180
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPARFAVLGIALAAGTGAAFLMSGGDPPPPPPPPAAEAPPQPTTDVLVAAIDMPMGQVL CCCHHEEHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHEEEECCCCHHHHH RAADLRWQPWPDGAVANGYMTRKINPKALEETVGASVRSGFLTGEPIRAQKLVRPESGFM HHHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCE AAILPPGMRAVAIVTDSRGTNSAGGFILPNDRVDVIRTFRDESNSRANNSDVQLSQTILT EEECCCCCEEEEEEECCCCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHH DIRVLAIGQLVQEKNGTNVVTGETATLAVTPAQAETLALAQKVGALTLSLRSLADAGRPP HHHHHHHHHHHHHCCCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC EATPLAEASAAQMPEPALTVVRFGVARQQTP CCCCCCCCHHHCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MNPARFAVLGIALAAGTGAAFLMSGGDPPPPPPPPAAEAPPQPTTDVLVAAIDMPMGQVL CCCHHEEHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHEEEECCCCHHHHH RAADLRWQPWPDGAVANGYMTRKINPKALEETVGASVRSGFLTGEPIRAQKLVRPESGFM HHHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCE AAILPPGMRAVAIVTDSRGTNSAGGFILPNDRVDVIRTFRDESNSRANNSDVQLSQTILT EEECCCCCEEEEEEECCCCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHH DIRVLAIGQLVQEKNGTNVVTGETATLAVTPAQAETLALAQKVGALTLSLRSLADAGRPP HHHHHHHHHHHHHCCCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC EATPLAEASAAQMPEPALTVVRFGVARQQTP CCCCCCCCHHHCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA