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The map label for this gene is hofQ [C]

Identifier: 170750189

GI number: 170750189

Start: 4031885

End: 4033525

Strand: Direct

Name: hofQ [C]

Synonym: Mrad2831_3791

Alternate gene names: 170750189

Gene position: 4031885-4033525 (Clockwise)

Preceding gene: 170750188

Following gene: 170750190

Centisome position: 66.34

GC content: 71.85

Gene sequence:

>1641_bases
ATGATCGCTCCGCCGCCCGCTTCACTGCCCGACGCCCGCGCGCTGCGGCGCCCCGACCGCGGCCCGCGCCGCCGCTCGGC
CGGCGCCCTCGCCCTGCTGGCCGCCTTGACCGGACCGGCCCCGGCCCAGGACCGCCAGACCTTCGGCCCCGCACCGGTCC
TGACGGTCGGGGCCGCGGAAGCCAACACGACCCGCCGGGTCGAGCTGACCGCGGGCCGCTCCGTCATCGTGGACCTGCCG
CGGGACGCCAAGGAGGTGTTCGTGGCCAACCCCGCGGTTGCCAACGCGGTGGTGCGCTCGACCCGCAAGGTCTTCGTGAT
CGGCATGGCCGACGGCGCGACCTCGATCTTCATCATGGATGCCGAGGGGCGCCAGATCGCCGCCCTCGACGTGACGGTGG
CGCGGGACCTCAACCTCGGGACCCTGCGCGAGCTGCTCAGCCAGAGCATCCCGGGCGGGCGCTTCGACGTGCGCTCCTCG
GGCGCCTCGGTGCTCCTGTCGGGGGCGGTCAACTCCTCGTCGGACGCGCAGCAGGCGATCGACATCGCCAACGCCTTCGT
GGGCCTGGGCGGCGGCGGGGCCGCCGGGCCGGCGGGCGCGGCGAGCGGCGGTGTCGCCGCCGGGTCGCGGGGCGCGGTGA
TCAACAACCTCACGATCCGCAACAAGGATCAGGTGATGCTCCGCGTCACCGTGGTCGAGGTATCGCGCAACGTCCTGAAG
CAGTTCGGGATCAACATGGCCGGCAACTGGTCGGCGCTGAACCCGGTCGGGAACCTGGGGCAGACGGTCGTGAACGGCGG
GACCGCGGCGGCCACGCAGGTGCCGGCGTACCTCCCGAACGTGATCACCAACAACCTGCCCTTCCCGATCAACACGAACA
CGCCGAGCGGAAACCTGATCCAGGCCTCCGTGCAGGGGGGCGGCTTCTCGCTTCAGGCGACCCTGAAGGCGTTCGAGCAG
GCCGGCGTCTCGCGCATCCTGGCCGAGCCGACGCTGACCGCCATCTCGGGCGAGGCCGCCAAGTTCCTGGCCGGCGGCGA
GTTCGCGGTCCCGGCCTCGGCGACCTGCGCGGTCGGCGGCGTCTGCTCGCCCGGCATCACCTACAAGCCCTACGGCGTCG
CCCTGTCGTTCACCCCGACGGTGCTGGCCGACAACCGGATCTCGATCCGCGTCGCCACGGACGTGACCGAGATCGATACC
CAACAGAGCTTCAGCTACGTCATCGGCAACACCTCGGTCGCGGTGCCGGGCACCCGGGTGCGCCGCTCAGAGACCACCGT
CGAGCTGCCCTCCGGCGGCGTGATGATGACCGCCGGCCTGATCCAGCAGTTCAACAAGCAGGCGATCGCCGGCCTGCCCG
GCCTGATCAACCTCCCGATCCTCGGCGCGCTGTTCCGCTCCCGCGATTACCAGCGCCAGGAGACCGAGCTGATGATCATG
TGCACGCCCTACATCGCCCGGCCGATGGAGCCGAAGCAGGTCAGCCGGCCCGACGACAACTTCGTCGACGCCAGCGACGG
GCAGACGGTGCTGCTCGGCCAGATCAACCGCATCTACGGCAAGGTCGCCCCGCCCGGCGCGACCGCCGCGGCGCCGCTCG
GCCGCGCCTACCGCGGCCGCGTCGGCTTCATCGTCGAGTAG

Upstream 100 bases:

>100_bases
AGGCCACGCCGCTGGCCGAAGCGTCCGCCGCGCAGATGCCCGAACCCGCCCTGACCGTGGTGCGCTTCGGCGTCGCGCGG
CAGCAGACGCCGTGACCGCC

Downstream 100 bases:

>100_bases
CGCCCCGCAGCCCCGCCGCGCCCCCAGGATCGGACCCATGACCGGACGTCACACGCCCGCCCTGCCCCGCCGCGCCGCGA
GCGTGCTCGCCGCCTGCGCG

Product: type II and III secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 546; Mature: 546

Protein sequence:

>546_residues
MIAPPPASLPDARALRRPDRGPRRRSAGALALLAALTGPAPAQDRQTFGPAPVLTVGAAEANTTRRVELTAGRSVIVDLP
RDAKEVFVANPAVANAVVRSTRKVFVIGMADGATSIFIMDAEGRQIAALDVTVARDLNLGTLRELLSQSIPGGRFDVRSS
GASVLLSGAVNSSSDAQQAIDIANAFVGLGGGGAAGPAGAASGGVAAGSRGAVINNLTIRNKDQVMLRVTVVEVSRNVLK
QFGINMAGNWSALNPVGNLGQTVVNGGTAAATQVPAYLPNVITNNLPFPINTNTPSGNLIQASVQGGGFSLQATLKAFEQ
AGVSRILAEPTLTAISGEAAKFLAGGEFAVPASATCAVGGVCSPGITYKPYGVALSFTPTVLADNRISIRVATDVTEIDT
QQSFSYVIGNTSVAVPGTRVRRSETTVELPSGGVMMTAGLIQQFNKQAIAGLPGLINLPILGALFRSRDYQRQETELMIM
CTPYIARPMEPKQVSRPDDNFVDASDGQTVLLGQINRIYGKVAPPGATAAAPLGRAYRGRVGFIVE

Sequences:

>Translated_546_residues
MIAPPPASLPDARALRRPDRGPRRRSAGALALLAALTGPAPAQDRQTFGPAPVLTVGAAEANTTRRVELTAGRSVIVDLP
RDAKEVFVANPAVANAVVRSTRKVFVIGMADGATSIFIMDAEGRQIAALDVTVARDLNLGTLRELLSQSIPGGRFDVRSS
GASVLLSGAVNSSSDAQQAIDIANAFVGLGGGGAAGPAGAASGGVAAGSRGAVINNLTIRNKDQVMLRVTVVEVSRNVLK
QFGINMAGNWSALNPVGNLGQTVVNGGTAAATQVPAYLPNVITNNLPFPINTNTPSGNLIQASVQGGGFSLQATLKAFEQ
AGVSRILAEPTLTAISGEAAKFLAGGEFAVPASATCAVGGVCSPGITYKPYGVALSFTPTVLADNRISIRVATDVTEIDT
QQSFSYVIGNTSVAVPGTRVRRSETTVELPSGGVMMTAGLIQQFNKQAIAGLPGLINLPILGALFRSRDYQRQETELMIM
CTPYIARPMEPKQVSRPDDNFVDASDGQTVLLGQINRIYGKVAPPGATAAAPLGRAYRGRVGFIVE
>Mature_546_residues
MIAPPPASLPDARALRRPDRGPRRRSAGALALLAALTGPAPAQDRQTFGPAPVLTVGAAEANTTRRVELTAGRSVIVDLP
RDAKEVFVANPAVANAVVRSTRKVFVIGMADGATSIFIMDAEGRQIAALDVTVARDLNLGTLRELLSQSIPGGRFDVRSS
GASVLLSGAVNSSSDAQQAIDIANAFVGLGGGGAAGPAGAASGGVAAGSRGAVINNLTIRNKDQVMLRVTVVEVSRNVLK
QFGINMAGNWSALNPVGNLGQTVVNGGTAAATQVPAYLPNVITNNLPFPINTNTPSGNLIQASVQGGGFSLQATLKAFEQ
AGVSRILAEPTLTAISGEAAKFLAGGEFAVPASATCAVGGVCSPGITYKPYGVALSFTPTVLADNRISIRVATDVTEIDT
QQSFSYVIGNTSVAVPGTRVRRSETTVELPSGGVMMTAGLIQQFNKQAIAGLPGLINLPILGALFRSRDYQRQETELMIM
CTPYIARPMEPKQVSRPDDNFVDASDGQTVLLGQINRIYGKVAPPGATAAAPLGRAYRGRVGFIVE

Specific function: Involved in the secretion of an unknown compound (Potential) [H]

COG id: COG4964

COG function: function code U; Flp pilus assembly protein, secretin CpaC

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 BON domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR004846
- InterPro:   IPR007055 [H]

Pfam domain/function: PF04972 BON; PF00263 Secretin [H]

EC number: NA

Molecular weight: Translated: 56403; Mature: 56403

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAPPPASLPDARALRRPDRGPRRRSAGALALLAALTGPAPAQDRQTFGPAPVLTVGAAE
CCCCCCCCCCCHHHHCCCCCCCCHHCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCC
ANTTRRVELTAGRSVIVDLPRDAKEVFVANPAVANAVVRSTRKVFVIGMADGATSIFIMD
CCCEEEEEEECCCEEEEECCCCCCCEEEECCHHHHHHHHCCCEEEEEEECCCCEEEEEEE
AEGRQIAALDVTVARDLNLGTLRELLSQSIPGGRFDVRSSGASVLLSGAVNSSSDAQQAI
CCCCEEEEEEEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCCCCCHHHHHH
DIANAFVGLGGGGAAGPAGAASGGVAAGSRGAVINNLTIRNKDQVMLRVTVVEVSRNVLK
HHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEHHHHHHHHH
QFGINMAGNWSALNPVGNLGQTVVNGGTAAATQVPAYLPNVITNNLPFPINTNTPSGNLI
HHCCCCCCCCCCCCCCHHCCHHHHCCCCHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCEE
QASVQGGGFSLQATLKAFEQAGVSRILAEPTLTAISGEAAKFLAGGEFAVPASATCAVGG
EEEECCCCEEHHHHHHHHHHHCHHHHHCCCCCEEECCCHHHEECCCCEECCCCCCEEECC
VCSPGITYKPYGVALSFTPTVLADNRISIRVATDVTEIDTQQSFSYVIGNTSVAVPGTRV
CCCCCCEECCCEEEEEECCEEEECCEEEEEEECCCHHHCCCCCCEEEECCCEEECCCCEE
RRSETTVELPSGGVMMTAGLIQQFNKQAIAGLPGLINLPILGALFRSRDYQRQETELMIM
ECCCCEEECCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEE
CTPYIARPMEPKQVSRPDDNFVDASDGQTVLLGQINRIYGKVAPPGATAAAPLGRAYRGR
ECHHHCCCCCCHHCCCCCCCCEECCCCCEEEEECHHHHHCCCCCCCCCHHCCCCHHHCCC
VGFIVE
EEEEEC
>Mature Secondary Structure
MIAPPPASLPDARALRRPDRGPRRRSAGALALLAALTGPAPAQDRQTFGPAPVLTVGAAE
CCCCCCCCCCCHHHHCCCCCCCCHHCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCC
ANTTRRVELTAGRSVIVDLPRDAKEVFVANPAVANAVVRSTRKVFVIGMADGATSIFIMD
CCCEEEEEEECCCEEEEECCCCCCCEEEECCHHHHHHHHCCCEEEEEEECCCCEEEEEEE
AEGRQIAALDVTVARDLNLGTLRELLSQSIPGGRFDVRSSGASVLLSGAVNSSSDAQQAI
CCCCEEEEEEEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCCCCCHHHHHH
DIANAFVGLGGGGAAGPAGAASGGVAAGSRGAVINNLTIRNKDQVMLRVTVVEVSRNVLK
HHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEHHHHHHHHH
QFGINMAGNWSALNPVGNLGQTVVNGGTAAATQVPAYLPNVITNNLPFPINTNTPSGNLI
HHCCCCCCCCCCCCCCHHCCHHHHCCCCHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCEE
QASVQGGGFSLQATLKAFEQAGVSRILAEPTLTAISGEAAKFLAGGEFAVPASATCAVGG
EEEECCCCEEHHHHHHHHHHHCHHHHHCCCCCEEECCCHHHEECCCCEECCCCCCEEECC
VCSPGITYKPYGVALSFTPTVLADNRISIRVATDVTEIDTQQSFSYVIGNTSVAVPGTRV
CCCCCCEECCCEEEEEECCEEEECCEEEEEEECCCHHHCCCCCCEEEECCCEEECCCCEE
RRSETTVELPSGGVMMTAGLIQQFNKQAIAGLPGLINLPILGALFRSRDYQRQETELMIM
ECCCCEEECCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEE
CTPYIARPMEPKQVSRPDDNFVDASDGQTVLLGQINRIYGKVAPPGATAAAPLGRAYRGR
ECHHHCCCCCCHHCCCCCCCCEECCCCCEEEEECHHHHHCCCCCCCCCHHCCCCHHHCCC
VGFIVE
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]