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The map label for this gene is ydeP [H]

Identifier: 170750142

GI number: 170750142

Start: 3982071

End: 3984446

Strand: Direct

Name: ydeP [H]

Synonym: Mrad2831_3744

Alternate gene names: 170750142

Gene position: 3982071-3984446 (Clockwise)

Preceding gene: 170750135

Following gene: 170750145

Centisome position: 65.52

GC content: 69.23

Gene sequence:

>2376_bases
ATGTGCCCGCTGTTTCCCGGCGGCACGGTTCGGAGATCGCCCCCCTTGGACAAGCCCGAATTCAAGCCCTACCGCCTGCC
CGCCGGTGGGTGGGGCTCCGCCCTGTCGGTCGGCAACATCCTGCGGCGCGAGGGCGTGCTGGCGAGCGGGCCGATCGCGC
TCAGCCGGCACAACAAGGTCGACGGCTACCAGTGCAACAGCTGCGCCTGGGTGAAGCCCGCGAGCCCGCTGCCCTTCGAG
TACTGCGAGAACGGCGTGAAGGCCGTGGCCTGGGAACTCACCGCCCACCGCTGCACGCCGGACTTCTTCGCCACCCATAC
GGTCACGGAGCTGCTGGACTGGGACGATTACCATCTGGAGCAGACCGGTCGCCTCACCCATCCGCTGCGCTACGACCCGG
CCACCGACAAGTACGTGCCGGTCTCCTGGGGCCACGCCGTCGAGGAGATCGCCCGCGAGCTCAGGGCCGTCCCGGACCGG
CAGAAGGGCACCGTGTTCTACAGCTCGGGCCGCCTGTCGAACGAGGCGAGCTACCTCTACCAGCTCTTCGCCCGGCTCTA
TGGCAACAACAACCTGCCGGACTCGTCCAACATGTGCCACGAGACGACCTCGGTGGCGCTGCCGGTGAGCATCGGCCAGG
CCGTGGGCTCCGTGTCGCTCGACGACTTCGCCCATTCCGACTGCATCATGTTCTTCGGCCAGAATCCCGGCAGCAACGCG
CCGCGGATGCTGCACCCGCTGCAGGAGGCGAGCCGGCGCGGCGTCCCGATCATCACCTACAACCCGCTGCGCGAGCGCGG
CCTGGAGCGGTTCCTGAACCCGCAATCGCCTACCGAGATGCTCACCGGCAAGGCGACGCGGATCAGCTCGCAGTACCATC
AGGTGAAGGCGGGGGGCGATCTCGCCGCCATCGCGGGCATCTGCAAGGCGGTCCTCGCCCTGCACGACGCGGCCCGGGCC
CGGGGCGGCGACGCCGTTCTCGACGAGGCCTTCATCCACGACAACACCCACGGCTTCGACGCCTTCGCCACCTGGCTGCG
CGCTCAGGACTGGGACGAGCTGGAGCGCCGCTCCGGCCTGCACCGGGCCGACATGGAATCGACCGCCCACGTCTACAGCC
ACGCGAAGGCGACCATCGGCGTCTACGGCATGGGGCTCACCCAGCACCGGGCCGGGGTCGAGACCGTCCAGATGCTGGTG
AACCTGCTGCTGATGCGCGGCAATATCGGCCGCTCCGGCGCCGGGATCTGCCCGATCCGGGGCCATTCCAACGTGCAGGG
CCAGCGCACGATGGGGATCACCGAGAAGCCCGAGCTGTTCGACCTCGACCGGCTGGGCCAGCAATTCGCCTTCGCGCCGC
CCCGCGAGCCGGGCTACAACACCGTCGAGGCCTGCGAGGCGATCCTGCGGGACGAGGTCAGCGCCTTCGTCATGCTCGGC
GGCAACTTCGCCCGCGCCATCCCCGACCACGGCCAGATGGAGCCGGCGTGGCGCCGGATCCCCCTGACCGTCAACGTCAT
CACCAAGCTCAACCGGACCGCGCTGCTGCCGGGCGCGATCAGCTACGTCCTCCCGGTCACCGGCCGCCTGGAGATCGTCG
AGACCTCCAAGGGCCAGCAGGTGCTCTCGATGGAGGACACCTCGGCCTGCGTGCACGGCAATCGCGGCCTGCGCCGTCCG
GCCTCGCCGCACCTGATCAGCGAGATCCGCCTGATCTGCGAGCTGGCGCAGCGCGTCCTCGATCCGAACCCGCGGGTGCG
CTGGGCGGCGTACAGCGAGGATTTCGCCGAGATCCGCCGCGAGATCGGCGAGACGCTGCCGGACTCGTTCTGGGACTACG
AGCGGCGCATGTGGGAGCCCGGCGGCTTCCAGCGCGACCTGCCGGCGAACCGGCGCGAGTGGCGCACGGAATCGGGACGG
GCCAACTTCGTCACCCCGACCGGGCTCGACGAGGACGCCGACATGCCCGATGTCGGCCACGACGCCCTGCGGCTGATGAC
GCTGCGCAGCAACGACCAGTTCAACACCACGGTCTACGGCTATTACGACCGCTTCCGGGGCATCAAGAACACCCGGAAGG
TGGTGCTGATGAACCGCTCGGACATCGACCGGCGGGGCCTCAAGATCGGCCAGCCCGTCACGCTCCGGACGGTCGCCGAT
GACGGCGTCGACCGCAAGCTCTCGGGCCTGCTGGTCGTGGCCTACGACATCCCGATCGGCTGCATCGGCGGCTACTACCC
CGAGTGCAATGTCCTGATGCCGATCTGGCACTACGCGATCGGCAGCAAGACGCCGGCCGCCAAGACGATCCCCGTCACGG
TGCACCCCGACAGCGACGCGGTCCTCGCGCCGGAGCTGGAATACGCCACCGGCTGA

Upstream 100 bases:

>100_bases
AAGAGATAGTCCCGACCGACCGCCACACTAACCTCCGTTAGGATCAAGATAATCTCGCGAACAAAGGGTGACGCCCGCGG
TTTCAACGGGGAACGTCGCG

Downstream 100 bases:

>100_bases
GGCGGACGGACGGCGTCCTCGTGGCTTTGGGCGGCGTCCCGCCCCTCCGCGGCGGCGCTCGCCCGGATCGCCGCGCCCGC
GTCAGAGCATCGGCATGCCG

Product: oxidoreductase alpha (molybdopterin) subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 791; Mature: 791

Protein sequence:

>791_residues
MCPLFPGGTVRRSPPLDKPEFKPYRLPAGGWGSALSVGNILRREGVLASGPIALSRHNKVDGYQCNSCAWVKPASPLPFE
YCENGVKAVAWELTAHRCTPDFFATHTVTELLDWDDYHLEQTGRLTHPLRYDPATDKYVPVSWGHAVEEIARELRAVPDR
QKGTVFYSSGRLSNEASYLYQLFARLYGNNNLPDSSNMCHETTSVALPVSIGQAVGSVSLDDFAHSDCIMFFGQNPGSNA
PRMLHPLQEASRRGVPIITYNPLRERGLERFLNPQSPTEMLTGKATRISSQYHQVKAGGDLAAIAGICKAVLALHDAARA
RGGDAVLDEAFIHDNTHGFDAFATWLRAQDWDELERRSGLHRADMESTAHVYSHAKATIGVYGMGLTQHRAGVETVQMLV
NLLLMRGNIGRSGAGICPIRGHSNVQGQRTMGITEKPELFDLDRLGQQFAFAPPREPGYNTVEACEAILRDEVSAFVMLG
GNFARAIPDHGQMEPAWRRIPLTVNVITKLNRTALLPGAISYVLPVTGRLEIVETSKGQQVLSMEDTSACVHGNRGLRRP
ASPHLISEIRLICELAQRVLDPNPRVRWAAYSEDFAEIRREIGETLPDSFWDYERRMWEPGGFQRDLPANRREWRTESGR
ANFVTPTGLDEDADMPDVGHDALRLMTLRSNDQFNTTVYGYYDRFRGIKNTRKVVLMNRSDIDRRGLKIGQPVTLRTVAD
DGVDRKLSGLLVVAYDIPIGCIGGYYPECNVLMPIWHYAIGSKTPAAKTIPVTVHPDSDAVLAPELEYATG

Sequences:

>Translated_791_residues
MCPLFPGGTVRRSPPLDKPEFKPYRLPAGGWGSALSVGNILRREGVLASGPIALSRHNKVDGYQCNSCAWVKPASPLPFE
YCENGVKAVAWELTAHRCTPDFFATHTVTELLDWDDYHLEQTGRLTHPLRYDPATDKYVPVSWGHAVEEIARELRAVPDR
QKGTVFYSSGRLSNEASYLYQLFARLYGNNNLPDSSNMCHETTSVALPVSIGQAVGSVSLDDFAHSDCIMFFGQNPGSNA
PRMLHPLQEASRRGVPIITYNPLRERGLERFLNPQSPTEMLTGKATRISSQYHQVKAGGDLAAIAGICKAVLALHDAARA
RGGDAVLDEAFIHDNTHGFDAFATWLRAQDWDELERRSGLHRADMESTAHVYSHAKATIGVYGMGLTQHRAGVETVQMLV
NLLLMRGNIGRSGAGICPIRGHSNVQGQRTMGITEKPELFDLDRLGQQFAFAPPREPGYNTVEACEAILRDEVSAFVMLG
GNFARAIPDHGQMEPAWRRIPLTVNVITKLNRTALLPGAISYVLPVTGRLEIVETSKGQQVLSMEDTSACVHGNRGLRRP
ASPHLISEIRLICELAQRVLDPNPRVRWAAYSEDFAEIRREIGETLPDSFWDYERRMWEPGGFQRDLPANRREWRTESGR
ANFVTPTGLDEDADMPDVGHDALRLMTLRSNDQFNTTVYGYYDRFRGIKNTRKVVLMNRSDIDRRGLKIGQPVTLRTVAD
DGVDRKLSGLLVVAYDIPIGCIGGYYPECNVLMPIWHYAIGSKTPAAKTIPVTVHPDSDAVLAPELEYATG
>Mature_791_residues
MCPLFPGGTVRRSPPLDKPEFKPYRLPAGGWGSALSVGNILRREGVLASGPIALSRHNKVDGYQCNSCAWVKPASPLPFE
YCENGVKAVAWELTAHRCTPDFFATHTVTELLDWDDYHLEQTGRLTHPLRYDPATDKYVPVSWGHAVEEIARELRAVPDR
QKGTVFYSSGRLSNEASYLYQLFARLYGNNNLPDSSNMCHETTSVALPVSIGQAVGSVSLDDFAHSDCIMFFGQNPGSNA
PRMLHPLQEASRRGVPIITYNPLRERGLERFLNPQSPTEMLTGKATRISSQYHQVKAGGDLAAIAGICKAVLALHDAARA
RGGDAVLDEAFIHDNTHGFDAFATWLRAQDWDELERRSGLHRADMESTAHVYSHAKATIGVYGMGLTQHRAGVETVQMLV
NLLLMRGNIGRSGAGICPIRGHSNVQGQRTMGITEKPELFDLDRLGQQFAFAPPREPGYNTVEACEAILRDEVSAFVMLG
GNFARAIPDHGQMEPAWRRIPLTVNVITKLNRTALLPGAISYVLPVTGRLEIVETSKGQQVLSMEDTSACVHGNRGLRRP
ASPHLISEIRLICELAQRVLDPNPRVRWAAYSEDFAEIRREIGETLPDSFWDYERRMWEPGGFQRDLPANRREWRTESGR
ANFVTPTGLDEDADMPDVGHDALRLMTLRSNDQFNTTVYGYYDRFRGIKNTRKVVLMNRSDIDRRGLKIGQPVTLRTVAD
DGVDRKLSGLLVVAYDIPIGCIGGYYPECNVLMPIWHYAIGSKTPAAKTIPVTVHPDSDAVLAPELEYATG

Specific function: Probably involved in acid resistance [H]

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787778, Length=763, Percent_Identity=43.9056356487549, Blast_Score=635, Evalue=0.0,
Organism=Escherichia coli, GI3868721, Length=726, Percent_Identity=23.8292011019284, Blast_Score=137, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR006657
- InterPro:   IPR006656
- InterPro:   IPR010046 [H]

Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]

EC number: NA

Molecular weight: Translated: 87753; Mature: 87753

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCPLFPGGTVRRSPPLDKPEFKPYRLPAGGWGSALSVGNILRREGVLASGPIALSRHNKV
CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHCCCEECCCEEECCCCCC
DGYQCNSCAWVKPASPLPFEYCENGVKAVAWELTAHRCTPDFFATHTVTELLDWDDYHLE
CCEECCCEEECCCCCCCCHHHHCCCHHEEEEEHHHHCCCCHHHHHHHHHHHHCCCCHHHH
QTGRLTHPLRYDPATDKYVPVSWGHAVEEIARELRAVPDRQKGTVFYSSGRLSNEASYLY
CCCCCCCCEECCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHH
QLFARLYGNNNLPDSSNMCHETTSVALPVSIGQAVGSVSLDDFAHSDCIMFFGQNPGSNA
HHHHHHHCCCCCCCCCCCCCCCCCEEEEEEHHHHHCCCCHHHHCCCCEEEEEECCCCCCC
PRMLHPLQEASRRGVPIITYNPLRERGLERFLNPQSPTEMLTGKATRISSQYHQVKAGGD
CHHHHHHHHHHHCCCEEEEECHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHCCCC
LAAIAGICKAVLALHDAARARGGDAVLDEAFIHDNTHGFDAFATWLRAQDWDELERRSGL
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHCCC
HRADMESTAHVYSHAKATIGVYGMGLTQHRAGVETVQMLVNLLLMRGNIGRSGAGICPIR
CHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEC
GHSNVQGQRTMGITEKPELFDLDRLGQQFAFAPPREPGYNTVEACEAILRDEVSAFVMLG
CCCCCCCCEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEC
GNFARAIPDHGQMEPAWRRIPLTVNVITKLNRTALLPGAISYVLPVTGRLEIVETSKGQQ
CCHHHCCCCCCCCCHHHHCCCEEEEEHHHCCCCEECCCHHHHHCCCCCCEEEEECCCCCE
VLSMEDTSACVHGNRGLRRPASPHLISEIRLICELAQRVLDPNPRVRWAAYSEDFAEIRR
EEEECCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHH
EIGETLPDSFWDYERRMWEPGGFQRDLPANRREWRTESGRANFVTPTGLDEDADMPDVGH
HHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCCCCCCCC
DALRLMTLRSNDQFNTTVYGYYDRFRGIKNTRKVVLMNRSDIDRRGLKIGQPVTLRTVAD
CCEEEEEEECCCCCCCEEEEHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECC
DGVDRKLSGLLVVAYDIPIGCIGGYYPECNVLMPIWHYAIGSKTPAAKTIPVTVHPDSDA
CCCCCCCCCEEEEEEECCCHHCCCCCCCCCEEHHHHHHHHCCCCCCCCEEEEEECCCCCC
VLAPELEYATG
EECCCCCCCCC
>Mature Secondary Structure
MCPLFPGGTVRRSPPLDKPEFKPYRLPAGGWGSALSVGNILRREGVLASGPIALSRHNKV
CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHCCCEECCCEEECCCCCC
DGYQCNSCAWVKPASPLPFEYCENGVKAVAWELTAHRCTPDFFATHTVTELLDWDDYHLE
CCEECCCEEECCCCCCCCHHHHCCCHHEEEEEHHHHCCCCHHHHHHHHHHHHCCCCHHHH
QTGRLTHPLRYDPATDKYVPVSWGHAVEEIARELRAVPDRQKGTVFYSSGRLSNEASYLY
CCCCCCCCEECCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHH
QLFARLYGNNNLPDSSNMCHETTSVALPVSIGQAVGSVSLDDFAHSDCIMFFGQNPGSNA
HHHHHHHCCCCCCCCCCCCCCCCCEEEEEEHHHHHCCCCHHHHCCCCEEEEEECCCCCCC
PRMLHPLQEASRRGVPIITYNPLRERGLERFLNPQSPTEMLTGKATRISSQYHQVKAGGD
CHHHHHHHHHHHCCCEEEEECHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHCCCC
LAAIAGICKAVLALHDAARARGGDAVLDEAFIHDNTHGFDAFATWLRAQDWDELERRSGL
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHCCC
HRADMESTAHVYSHAKATIGVYGMGLTQHRAGVETVQMLVNLLLMRGNIGRSGAGICPIR
CHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEC
GHSNVQGQRTMGITEKPELFDLDRLGQQFAFAPPREPGYNTVEACEAILRDEVSAFVMLG
CCCCCCCCEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEC
GNFARAIPDHGQMEPAWRRIPLTVNVITKLNRTALLPGAISYVLPVTGRLEIVETSKGQQ
CCHHHCCCCCCCCCHHHHCCCEEEEEHHHCCCCEECCCHHHHHCCCCCCEEEEECCCCCE
VLSMEDTSACVHGNRGLRRPASPHLISEIRLICELAQRVLDPNPRVRWAAYSEDFAEIRR
EEEECCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHH
EIGETLPDSFWDYERRMWEPGGFQRDLPANRREWRTESGRANFVTPTGLDEDADMPDVGH
HHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCCCCCCCC
DALRLMTLRSNDQFNTTVYGYYDRFRGIKNTRKVVLMNRSDIDRRGLKIGQPVTLRTVAD
CCEEEEEEECCCCCCCEEEEHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECC
DGVDRKLSGLLVVAYDIPIGCIGGYYPECNVLMPIWHYAIGSKTPAAKTIPVTVHPDSDA
CCCCCCCCCEEEEEEECCCHHCCCCCCCCCEEHHHHHHHHCCCCCCCCEEEEEECCCCCC
VLAPELEYATG
EECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]