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The map label for this gene is ssb [H]

Identifier: 170750135

GI number: 170750135

Start: 3978047

End: 3978607

Strand: Direct

Name: ssb [H]

Synonym: Mrad2831_3737

Alternate gene names: 170750135

Gene position: 3978047-3978607 (Clockwise)

Preceding gene: 170750134

Following gene: 170750142

Centisome position: 65.45

GC content: 71.12

Gene sequence:

>561_bases
ATGGCGGGCAGCGTCAACAAGGTGATTCTGGTGGGCAACCTCGGGCGCGATCCCGAGATGCGCCGCCTCGGTTCGGGCGA
CCCGGTCTGCAACCTGCGGCTCGCGACGTCGGAGTCCTGGAAGGACAAGGCGACCGGCGAGCGCAAGGAGAAGACCGAGT
GGCACTCGGTCGTGATCTACAACGACAATCTCGCCCGGGTGGCCGAGCAGTACCTGCGCAAGGGCTCGAAGGTCTACATC
GAGGGCCAGCTCCAGACCCGGAAGTGGACCGACAATTCCGGCGTCGAGAAGTACACGACCGAGGTGGTGCTCCAGCGCTT
CCGCGGCGAGATGACGATCCTCGACGGGCGCGGCGGCGGCGGCGACTTCGCCGGCGAGGACGAGGGTGGCGGCCAGATCA
GCCGCGGCGGCGACTTCGGCGGTGGCCGGGGCGGTGATCGCGGCGGCGATTTCGGCGGCGGACGCGCCCAGGGCGGCGAG
CGGCGTCCGGCCCCGGCCTCCTCGGGCGGCGGCGGCGGCAGCCGCGGCGGCTACGACCTCGACGACGACATCCCGTTCTA
G

Upstream 100 bases:

>100_bases
ACAAGCCTGACCCGCCGGTTGCCGCTCCGGAAGCCCGGGCGCATGGTTCGCGCGCCGCCGGGCTGGTGCCCTGTGAGATC
CGTACGACTAGGAGAGAGCG

Downstream 100 bases:

>100_bases
GATCGTGTCCGGTCCAGGGGCAGCGCCCTCCCTCACCTGGGCGGGCCGCCCGCTCGGGTGAGTCGAACCTCCGGGCCGGA
ACGGCCCGGCCGTATCGATG

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MAGSVNKVILVGNLGRDPEMRRLGSGDPVCNLRLATSESWKDKATGERKEKTEWHSVVIYNDNLARVAEQYLRKGSKVYI
EGQLQTRKWTDNSGVEKYTTEVVLQRFRGEMTILDGRGGGGDFAGEDEGGGQISRGGDFGGGRGGDRGGDFGGGRAQGGE
RRPAPASSGGGGGSRGGYDLDDDIPF

Sequences:

>Translated_186_residues
MAGSVNKVILVGNLGRDPEMRRLGSGDPVCNLRLATSESWKDKATGERKEKTEWHSVVIYNDNLARVAEQYLRKGSKVYI
EGQLQTRKWTDNSGVEKYTTEVVLQRFRGEMTILDGRGGGGDFAGEDEGGGQISRGGDFGGGRGGDRGGDFGGGRAQGGE
RRPAPASSGGGGGSRGGYDLDDDIPF
>Mature_185_residues
AGSVNKVILVGNLGRDPEMRRLGSGDPVCNLRLATSESWKDKATGERKEKTEWHSVVIYNDNLARVAEQYLRKGSKVYIE
GQLQTRKWTDNSGVEKYTTEVVLQRFRGEMTILDGRGGGGDFAGEDEGGGQISRGGDFGGGRGGDRGGDFGGGRAQGGER
RPAPASSGGGGGSRGGYDLDDDIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=108, Percent_Identity=32.4074074074074, Blast_Score=74, Evalue=1e-13,
Organism=Escherichia coli, GI1790494, Length=182, Percent_Identity=53.8461538461538, Blast_Score=159, Evalue=1e-40,
Organism=Drosophila melanogaster, GI85725234, Length=101, Percent_Identity=32.6732673267327, Blast_Score=63, Evalue=1e-10,
Organism=Drosophila melanogaster, GI24647376, Length=101, Percent_Identity=32.6732673267327, Blast_Score=63, Evalue=1e-10,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 19774; Mature: 19643

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGSVNKVILVGNLGRDPEMRRLGSGDPVCNLRLATSESWKDKATGERKEKTEWHSVVIY
CCCCCCEEEEEECCCCCHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEE
NDNLARVAEQYLRKGSKVYIEGQLQTRKWTDNSGVEKYTTEVVLQRFRGEMTILDGRGGG
CCCHHHHHHHHHHCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCC
GDFAGEDEGGGQISRGGDFGGGRGGDRGGDFGGGRAQGGERRPAPASSGGGGGSRGGYDL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DDDIPF
CCCCCC
>Mature Secondary Structure 
AGSVNKVILVGNLGRDPEMRRLGSGDPVCNLRLATSESWKDKATGERKEKTEWHSVVIY
CCCCCEEEEEECCCCCHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEE
NDNLARVAEQYLRKGSKVYIEGQLQTRKWTDNSGVEKYTTEVVLQRFRGEMTILDGRGGG
CCCHHHHHHHHHHCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCC
GDFAGEDEGGGQISRGGDFGGGRGGDRGGDFGGGRAQGGERRPAPASSGGGGGSRGGYDL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DDDIPF
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]