| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is fabZ
Identifier: 170749837
GI number: 170749837
Start: 3650829
End: 3651305
Strand: Reverse
Name: fabZ
Synonym: Mrad2831_3437
Alternate gene names: 170749837
Gene position: 3651305-3650829 (Counterclockwise)
Preceding gene: 170749838
Following gene: 170749836
Centisome position: 60.08
GC content: 66.67
Gene sequence:
>477_bases ATGAGTGAGGCGGCGCGCGAGACCGGCACCGAGCTGGGCACAGCCGACATCCAGACGCTGCTGGAGCTGCTGCCGCACCG CTACCCGTTCCTGATGGTGGACCGCATCGTCGAGATCGACCGGGACGAATCCTGCGTCGGCATCAAGAACGTCACGGCCA ACGAGCCGCAGTTCATGGGCCATTTCCCCGACATGCCGGTCTTCCCGGGCGTGCTCCTGATCGAGGGCATGGCGCAGACG GCGGGCGCCATCTGCTGCCGCCACATCCGTGCGGACGGGCGGAACACCAAGCAGGTGTTCTTCATGACCATCGACAAGTG CAAGTTCCGCAAGCCCGTCACCCCCGGCGACCAGGTGCGCTTCCACATGACGAAGCTGAACCAGCGCCGGACCATGTGGT GGTTCCGCGGCGAGGCCCGGGTCGACGGCACGCTGGTCGCCGAGGCCGAGATCAGCGCCATGCTGGTGACGGAGTGA
Upstream 100 bases:
>100_bases CCTTGCGCTTCCGGCGATTTCTTCCGAAGAGGGCGGTCGGCGCGCCGGAGGCGGCCGGATTGCGGGCCGCCGAAGGCGGC AAGTCGAGGTGCGGATTTCG
Downstream 100 bases:
>100_bases CCGCGCCCGCCATCCACCCGAGCGCCGTGATCGAGTCCGGCGCCCGGATCGGCGACGGGGCGCGGATCGGCCCCTTCTGC CATGTCGGGCCCGAGGTCGT
Product: (3R)-hydroxymyristoyl-ACP dehydratase
Products: NA
Alternate protein names: (3R)-hydroxymyristoyl ACP dehydrase
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MSEAARETGTELGTADIQTLLELLPHRYPFLMVDRIVEIDRDESCVGIKNVTANEPQFMGHFPDMPVFPGVLLIEGMAQT AGAICCRHIRADGRNTKQVFFMTIDKCKFRKPVTPGDQVRFHMTKLNQRRTMWWFRGEARVDGTLVAEAEISAMLVTE
Sequences:
>Translated_158_residues MSEAARETGTELGTADIQTLLELLPHRYPFLMVDRIVEIDRDESCVGIKNVTANEPQFMGHFPDMPVFPGVLLIEGMAQT AGAICCRHIRADGRNTKQVFFMTIDKCKFRKPVTPGDQVRFHMTKLNQRRTMWWFRGEARVDGTLVAEAEISAMLVTE >Mature_157_residues SEAARETGTELGTADIQTLLELLPHRYPFLMVDRIVEIDRDESCVGIKNVTANEPQFMGHFPDMPVFPGVLLIEGMAQTA GAICCRHIRADGRNTKQVFFMTIDKCKFRKPVTPGDQVRFHMTKLNQRRTMWWFRGEARVDGTLVAEAEISAMLVTE
Specific function: Involved in saturated fatty acids biosynthesis
COG id: COG0764
COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioester dehydratase family. FabZ subfamily
Homologues:
Organism=Escherichia coli, GI1786377, Length=140, Percent_Identity=42.8571428571429, Blast_Score=126, Evalue=8e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FABZ_METRJ (B1LTP5)
Other databases:
- EMBL: CP001001 - RefSeq: YP_001756097.1 - ProteinModelPortal: B1LTP5 - SMR: B1LTP5 - GeneID: 6139485 - GenomeReviews: CP001001_GR - KEGG: mrd:Mrad2831_3437 - HOGENOM: HBG433282 - OMA: ILQANIQ - ProtClustDB: PRK00006 - GO: GO:0005737 - HAMAP: MF_00406 - InterPro: IPR013114 - InterPro: IPR010084 - TIGRFAMs: TIGR01750
Pfam domain/function: PF07977 FabA
EC number: 4.2.1.-
Molecular weight: Translated: 17916; Mature: 17785
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: ACT_SITE 61-61
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEAARETGTELGTADIQTLLELLPHRYPFLMVDRIVEIDRDESCVGIKNVTANEPQFMG CCCHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCC HFPDMPVFPGVLLIEGMAQTAGAICCRHIRADGRNTKQVFFMTIDKCKFRKPVTPGDQVR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCEE FHMTKLNQRRTMWWFRGEARVDGTLVAEAEISAMLVTE EEEECCCCCCEEEEECCCCCCCCEEEEECCEEEEEECC >Mature Secondary Structure SEAARETGTELGTADIQTLLELLPHRYPFLMVDRIVEIDRDESCVGIKNVTANEPQFMG CCHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCC HFPDMPVFPGVLLIEGMAQTAGAICCRHIRADGRNTKQVFFMTIDKCKFRKPVTPGDQVR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCEE FHMTKLNQRRTMWWFRGEARVDGTLVAEAEISAMLVTE EEEECCCCCCEEEEECCCCCCCCEEEEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA