| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is lpxA
Identifier: 170749836
GI number: 170749836
Start: 3650014
End: 3650832
Strand: Reverse
Name: lpxA
Synonym: Mrad2831_3436
Alternate gene names: 170749836
Gene position: 3650832-3650014 (Counterclockwise)
Preceding gene: 170749837
Following gene: 170749835
Centisome position: 60.07
GC content: 71.18
Gene sequence:
>819_bases GTGACCGCGCCCGCCATCCACCCGAGCGCCGTGATCGAGTCCGGCGCCCGGATCGGCGACGGGGCGCGGATCGGCCCCTT CTGCCATGTCGGGCCCGAGGTCGTGCTCGGCGCGGATTGCGAGCTCATCAGCCACGTGGTCCTCGCGGGCCGGACCACGA TCGGCCCCCGCACCCGGATCTTCCCCTTCGCGTCGATCGGCCACCAGCCGCAGGACCTGAAGTACCGGGGCGAGGCCTCG ACCCTGACGATCGGCGCCGATTGCCTGATCCGCGAAGGCGTCACCATGAACCCGGGCACGAGCGGCGGCGGCCTGGAGAC CCTGGTCGGCGACCACTGCACCTTCCTGGCCAACTCGCATGTCGGCCACGATTGTCGGGTCGGCGCCCACGTGATCTTCT CCAACAACGTCATGCTGGCGGGCCATTGCAGCGTCGGCGACTACGCGATCCTGGGTGGCGGCGCCGCCGTGATCCAGTTC GCGCGGGTCGGCGCGCACGCCTTCGTGGGCGGCCTGTCGGGCCTGGAGAACGACTGCATCCCCTACGGCATGGTGCTCGG CAACCGGGCCTACCTGTCGGGGCTCAACATCATCGGCCTGCAGCGCCGCGGCTTCGCCCGCGAGGACATCCACGCGCTGC GGCGCGCCTACCGCCTGCTCTTCGCCCCAGAGGGCACGCTGATGGAGCGGGTGGAGGACGTGGCCGCGACCTTCGAATCC CACGCGGCGGTCGCCGAGATCCTCGACTTCATCCGCCTCGGCGGCAAGCGCTCGATCTGCACGCCGCGCGAGGTTCCGAC CCCGATCAGCGCCGCCTGA
Upstream 100 bases:
>100_bases AGCTGAACCAGCGCCGGACCATGTGGTGGTTCCGCGGCGAGGCCCGGGTCGACGGCACGCTGGTCGCCGAGGCCGAGATC AGCGCCATGCTGGTGACGGA
Downstream 100 bases:
>100_bases GCGGCCGGGCCGTGACCGAGGCCGATCCCGCCCCCGAGGGGGCCCTGGTCCTGATCGCGGGGGCGGGGCGCCTGCCCGAA CTCGTCGCCGAGTCGCTCCG
Product: UDP-N-acetylglucosamine acyltransferase
Products: NA
Alternate protein names: UDP-N-acetylglucosamine acyltransferase
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MTAPAIHPSAVIESGARIGDGARIGPFCHVGPEVVLGADCELISHVVLAGRTTIGPRTRIFPFASIGHQPQDLKYRGEAS TLTIGADCLIREGVTMNPGTSGGGLETLVGDHCTFLANSHVGHDCRVGAHVIFSNNVMLAGHCSVGDYAILGGGAAVIQF ARVGAHAFVGGLSGLENDCIPYGMVLGNRAYLSGLNIIGLQRRGFAREDIHALRRAYRLLFAPEGTLMERVEDVAATFES HAAVAEILDFIRLGGKRSICTPREVPTPISAA
Sequences:
>Translated_272_residues MTAPAIHPSAVIESGARIGDGARIGPFCHVGPEVVLGADCELISHVVLAGRTTIGPRTRIFPFASIGHQPQDLKYRGEAS TLTIGADCLIREGVTMNPGTSGGGLETLVGDHCTFLANSHVGHDCRVGAHVIFSNNVMLAGHCSVGDYAILGGGAAVIQF ARVGAHAFVGGLSGLENDCIPYGMVLGNRAYLSGLNIIGLQRRGFAREDIHALRRAYRLLFAPEGTLMERVEDVAATFES HAAVAEILDFIRLGGKRSICTPREVPTPISAA >Mature_271_residues TAPAIHPSAVIESGARIGDGARIGPFCHVGPEVVLGADCELISHVVLAGRTTIGPRTRIFPFASIGHQPQDLKYRGEAST LTIGADCLIREGVTMNPGTSGGGLETLVGDHCTFLANSHVGHDCRVGAHVIFSNNVMLAGHCSVGDYAILGGGAAVIQFA RVGAHAFVGGLSGLENDCIPYGMVLGNRAYLSGLNIIGLQRRGFAREDIHALRRAYRLLFAPEGTLMERVEDVAATFESH AAVAEILDFIRLGGKRSICTPREVPTPISAA
Specific function: Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
COG id: COG1043
COG function: function code M; Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family. LpxA subfamily
Homologues:
Organism=Escherichia coli, GI1786378, Length=245, Percent_Identity=48.5714285714286, Blast_Score=217, Evalue=5e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LPXA_METRJ (B1LTP4)
Other databases:
- EMBL: CP001001 - RefSeq: YP_001756096.1 - ProteinModelPortal: B1LTP4 - SMR: B1LTP4 - GeneID: 6139484 - GenomeReviews: CP001001_GR - KEGG: mrd:Mrad2831_3436 - HOGENOM: HBG659295 - OMA: DLKYQGE - ProtClustDB: PRK05289 - GO: GO:0005737 - HAMAP: MF_00387 - InterPro: IPR001451 - InterPro: IPR010137 - InterPro: IPR011004 - PIRSF: PIRSF000456 - TIGRFAMs: TIGR01852
Pfam domain/function: PF00132 Hexapep; SSF51161 Trimer_LpxA_like
EC number: =2.3.1.129
Molecular weight: Translated: 28560; Mature: 28429
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPAIHPSAVIESGARIGDGARIGPFCHVGPEVVLGADCELISHVVLAGRTTIGPRTRI CCCCCCCHHHHHHCCCCCCCCCCCCCEEECCCCEEECCCHHHHHHHHHHCCCCCCCCCEE FPFASIGHQPQDLKYRGEASTLTIGADCLIREGVTMNPGTSGGGLETLVGDHCTFLANSH EEHHHCCCCCCCCEECCCCCEEEECCHHHEECCCEECCCCCCCCHHHHHCCCEEEEECCC VGHDCRVGAHVIFSNNVMLAGHCSVGDYAILGGGAAVIQFARVGAHAFVGGLSGLENDCI CCCCCCCCEEEEEECCEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCC PYGMVLGNRAYLSGLNIIGLQRRGFAREDIHALRRAYRLLFAPEGTLMERVEDVAATFES CCHHHCCCHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH HAAVAEILDFIRLGGKRSICTPREVPTPISAA HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TAPAIHPSAVIESGARIGDGARIGPFCHVGPEVVLGADCELISHVVLAGRTTIGPRTRI CCCCCCHHHHHHCCCCCCCCCCCCCEEECCCCEEECCCHHHHHHHHHHCCCCCCCCCEE FPFASIGHQPQDLKYRGEASTLTIGADCLIREGVTMNPGTSGGGLETLVGDHCTFLANSH EEHHHCCCCCCCCEECCCCCEEEECCHHHEECCCEECCCCCCCCHHHHHCCCEEEEECCC VGHDCRVGAHVIFSNNVMLAGHCSVGDYAILGGGAAVIQFARVGAHAFVGGLSGLENDCI CCCCCCCCEEEEEECCEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCC PYGMVLGNRAYLSGLNIIGLQRRGFAREDIHALRRAYRLLFAPEGTLMERVEDVAATFES CCHHHCCCHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH HAAVAEILDFIRLGGKRSICTPREVPTPISAA HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA