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The map label for this gene is ykgB [H]

Identifier: 170749812

GI number: 170749812

Start: 3622307

End: 3623371

Strand: Direct

Name: ykgB [H]

Synonym: Mrad2831_3411

Alternate gene names: 170749812

Gene position: 3622307-3623371 (Clockwise)

Preceding gene: 170749811

Following gene: 170749813

Centisome position: 59.6

GC content: 74.93

Gene sequence:

>1065_bases
ATGCTCCGCATGACCGATACCGCCCCCCGCGGCCTCGCCTTCGTGGGCTGCTTCACGACCGAGCGGCGCCGGGCGCGCGG
CCAGGGCATCGACATCTACCGGACCGGCCGCGACCTCGGCGACTGGACGCGTCTCGGGCGGGTCGAGAACCTGACGAACC
CGTCCTTCCTGGCGACCGACCCGGCGCGCGCGATCCTCTACACGGTCCAGGGCGACGGCGAGGCGGCGAGCGCCTTCGCG
GTCTCGCCCGACGGCACCCTGCGCGGTCTCGGCAGCGCCGCCACCGGCGGCACCAACAGCGTGCACCAGGCCCTCGCCCC
CGACGGCCGCTTCCTGATCGTCGCCAACTACGCCAGCGGATCGGTCGCCCTCATGCCGGTGCGCGCCGATGGCGGCCTGG
AGCCCGCGCGCGACGTCCTGCCGCTGCCGGGCGAGCCGGGCCCGCATCGGACCGAGCAGGCCTGCGCCCACCCGCACCAC
GTGGTCCTGTCGCCGGACGGCCGCCACGTCGTCGTCCCCGACAAGGGCCTCGACCGCGTCTTCGTGCTGAAGCTCGCGGG
TGAGCGGCTCGCCGTCGTCTCGCAGACCGCGATGCGGCCCGGCGCCGGCCCGCGCCACATCGCGTTCCACCCGCACCGGC
CCCTCGCCTTTCTGGTCAACGAGCTGGACTCGAGTGTCGCCACCTGCCGGTGGGACGCGGACGCCGGGACGCTGACGCCC
CTGCACCTCGCCTCGACCCTGCCGCCGGACTTCTTCGGGGCGAGCACCGCCGCGGCCATCGCGGTCACGCCGGACGGGCG
GTTCGTCTACGCGTCGAACCGCGGGCAGGACGGGATCGCGCGGTTCCGGGCGGACCCGGCCGGGCGCCTCGAGCCGGCGG
GCTGGACGCCCTCCGGCGGCCGCGACCCGCGCTTCATGATCCTGGCACCGGACGGAGGCCACCTGCTCGTCGCCAACGAG
CAGGGCGACAGCCTCGTCGCCTTCGCCATCGATCCCGAGACCGGGGACCTGACTCGGACGGGCGAACGCCCGAGCCTCAG
CCCCTGCACGATCGCGTTCTTGTAG

Upstream 100 bases:

>100_bases
GGACCCCCTCCCGGGGCGCCGGAGCGGCCGCTCTCGGGCGGCCGGCATCCCCGCGCGGTCGATCCCGCAGGCTGCCGCCG
CAGCCTTGTCCCCGATCCGG

Downstream 100 bases:

>100_bases
GAGGCGCCGACGCGCGTTCGGGCCCGCGCCGAGCGTGGGCCTGACCATGCCCCTCAGGGGCAGGAGAGGCGGAGCCGGCG
GCGGTCGAACCGTGACCTCT

Product: putative hemagglutinin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MLRMTDTAPRGLAFVGCFTTERRRARGQGIDIYRTGRDLGDWTRLGRVENLTNPSFLATDPARAILYTVQGDGEAASAFA
VSPDGTLRGLGSAATGGTNSVHQALAPDGRFLIVANYASGSVALMPVRADGGLEPARDVLPLPGEPGPHRTEQACAHPHH
VVLSPDGRHVVVPDKGLDRVFVLKLAGERLAVVSQTAMRPGAGPRHIAFHPHRPLAFLVNELDSSVATCRWDADAGTLTP
LHLASTLPPDFFGASTAAAIAVTPDGRFVYASNRGQDGIARFRADPAGRLEPAGWTPSGGRDPRFMILAPDGGHLLVANE
QGDSLVAFAIDPETGDLTRTGERPSLSPCTIAFL

Sequences:

>Translated_354_residues
MLRMTDTAPRGLAFVGCFTTERRRARGQGIDIYRTGRDLGDWTRLGRVENLTNPSFLATDPARAILYTVQGDGEAASAFA
VSPDGTLRGLGSAATGGTNSVHQALAPDGRFLIVANYASGSVALMPVRADGGLEPARDVLPLPGEPGPHRTEQACAHPHH
VVLSPDGRHVVVPDKGLDRVFVLKLAGERLAVVSQTAMRPGAGPRHIAFHPHRPLAFLVNELDSSVATCRWDADAGTLTP
LHLASTLPPDFFGASTAAAIAVTPDGRFVYASNRGQDGIARFRADPAGRLEPAGWTPSGGRDPRFMILAPDGGHLLVANE
QGDSLVAFAIDPETGDLTRTGERPSLSPCTIAFL
>Mature_354_residues
MLRMTDTAPRGLAFVGCFTTERRRARGQGIDIYRTGRDLGDWTRLGRVENLTNPSFLATDPARAILYTVQGDGEAASAFA
VSPDGTLRGLGSAATGGTNSVHQALAPDGRFLIVANYASGSVALMPVRADGGLEPARDVLPLPGEPGPHRTEQACAHPHH
VVLSPDGRHVVVPDKGLDRVFVLKLAGERLAVVSQTAMRPGAGPRHIAFHPHRPLAFLVNELDSSVATCRWDADAGTLTP
LHLASTLPPDFFGASTAAAIAVTPDGRFVYASNRGQDGIARFRADPAGRLEPAGWTPSGGRDPRFMILAPDGGHLLVANE
QGDSLVAFAIDPETGDLTRTGERPSLSPCTIAFL

Specific function: Unknown

COG id: COG2706

COG function: function code G; 3-carboxymuconate cyclase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cycloisomerase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786983, Length=269, Percent_Identity=28.996282527881, Blast_Score=96, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011048
- InterPro:   IPR019405
- InterPro:   IPR015943 [H]

Pfam domain/function: PF10282 DUF2394 [H]

EC number: NA

Molecular weight: Translated: 37366; Mature: 37366

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRMTDTAPRGLAFVGCFTTERRRARGQGIDIYRTGRDLGDWTRLGRVENLTNPSFLATD
CCCCCCCCCCCEEEEEEECCHHHHHCCCCEEEEECCCCHHHHHHHCCHHCCCCCCEEEEC
PARAILYTVQGDGEAASAFAVSPDGTLRGLGSAATGGTNSVHQALAPDGRFLIVANYASG
CCEEEEEEEECCCCCCEEEEECCCCCEEECCCCCCCCCCHHHHHHCCCCCEEEEEEECCC
SVALMPVRADGGLEPARDVLPLPGEPGPHRTEQACAHPHHVVLSPDGRHVVVPDKGLDRV
CEEEEEEECCCCCCCHHHCCCCCCCCCCCCCHHHHCCCCEEEECCCCCEEEECCCCCCEE
FVLKLAGERLAVVSQTAMRPGAGPRHIAFHPHRPLAFLVNELDSSVATCRWDADAGTLTP
EEEEECCCEEEEEEHHHCCCCCCCCEEEECCCCCHHHHHHHHCCCEEEEEECCCCCCCCH
LHLASTLPPDFFGASTAAAIAVTPDGRFVYASNRGQDGIARFRADPAGRLEPAGWTPSGG
HHHHHCCCCHHCCCCCCEEEEECCCCCEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCC
RDPRFMILAPDGGHLLVANEQGDSLVAFAIDPETGDLTRTGERPSLSPCTIAFL
CCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCCCEECCCCCCCCCEEEEEC
>Mature Secondary Structure
MLRMTDTAPRGLAFVGCFTTERRRARGQGIDIYRTGRDLGDWTRLGRVENLTNPSFLATD
CCCCCCCCCCCEEEEEEECCHHHHHCCCCEEEEECCCCHHHHHHHCCHHCCCCCCEEEEC
PARAILYTVQGDGEAASAFAVSPDGTLRGLGSAATGGTNSVHQALAPDGRFLIVANYASG
CCEEEEEEEECCCCCCEEEEECCCCCEEECCCCCCCCCCHHHHHHCCCCCEEEEEEECCC
SVALMPVRADGGLEPARDVLPLPGEPGPHRTEQACAHPHHVVLSPDGRHVVVPDKGLDRV
CEEEEEEECCCCCCCHHHCCCCCCCCCCCCCHHHHCCCCEEEECCCCCEEEECCCCCCEE
FVLKLAGERLAVVSQTAMRPGAGPRHIAFHPHRPLAFLVNELDSSVATCRWDADAGTLTP
EEEEECCCEEEEEEHHHCCCCCCCCEEEECCCCCHHHHHHHHCCCEEEEEECCCCCCCCH
LHLASTLPPDFFGASTAAAIAVTPDGRFVYASNRGQDGIARFRADPAGRLEPAGWTPSGG
HHHHHCCCCHHCCCCCCEEEEECCCCCEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCC
RDPRFMILAPDGGHLLVANEQGDSLVAFAIDPETGDLTRTGERPSLSPCTIAFL
CCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCCCEECCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]