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The map label for this gene is ycjO [C]

Identifier: 170749298

GI number: 170749298

Start: 3043482

End: 3044438

Strand: Reverse

Name: ycjO [C]

Synonym: Mrad2831_2891

Alternate gene names: 170749298

Gene position: 3044438-3043482 (Counterclockwise)

Preceding gene: 170749299

Following gene: 170749297

Centisome position: 50.09

GC content: 66.25

Gene sequence:

>957_bases
ATGGCGCACACGGCCCTGACGCAGCCCGCCCCGGCCGCAATCCCGACCCGCTCGGCCTGGCAGCGCGTGCGCGCGAGCCG
GGGCTGGGCGGGGTTCTGGTTCATGTTGCCGACGGCGCTGATCCTCGGCCTGTTCCTGGCCTACCCTCTCCTGAAGGGTA
TCTGGCTGTCCTTCACCAACGCGCGGATCGGCCGCGAGGGCGTCTTCGTCGGTCTCGAGAACTACGAGTGGCTCTGGGAC
GACGACGTCTTCTGGCTCTCGGTATTCAACACCTGCCTCTACACGGCGGTGGCGTCCGTGGTGAAGTTCGGCGTCGGACT
CTACCTCGCGCTGCTGCTCAACAAGAACATGCCGTTCAAGTCGATCATCCGGTCGATCGTGCTGATCCCGTTCGTGGTGC
CGACGGTTCTGTCGGCCATCGCGTTCTGGTGGATCTTCGACAGCCAGTTCTCGATCATCTCCTGGTCTCTGCGGCATCTC
GGGGTGATCGACGGCAACATCGACTTCCTCGGCGAGCCGGCCATGGCGCGCGCCTGCGTGATCTTCGCCAACATCTGGCG
GGGCGTGCCGTTCATCGCCATCACGCTGCTCGCCGGTCTCCAGACGGTCTCGCCCTCGCTCTACGAGGCCGCGACGCTCG
ACGGCGCCTCGAACTGGCAGATCTTCTCGCGGATCACCCTGCCGCTCCTGACCCCGATCATCGCCGTGGTCATGACCTTC
TCGGTGCTGTTCACCTTCACCGACTTCCAGTTGATCTGGGCGATGACGCGCGGCGGTCCGGTGAACGCCACCCACCTGAT
GGCGACCCTCTCGTACCAGCGCGGCATCCTCTCGGGGACGCTCGGCGAGGGCGCGGCCATCGCCACCGCCATGGTGCCGT
TCCTGCTCGCGGCCATCGGCATCTCGTGGTTCGGCCTGCAGCGAAGGGCTTGGCAGTCCGGGGAGTCCGACCGATGA

Upstream 100 bases:

>100_bases
GCACCGGCCGCGAGGACGTGAAGGGCGCAATCAAGAACGCCGAGCGCGCCGCCACCCGCATCTTCCGGAACACCTGACCC
CACCCGCCGGAGGCGAGACC

Downstream 100 bases:

>100_bases
GCGCGCCCGCACCGCCGGCCCACGCCGACCCGCACCTCGCCCCCGTCCTCGCGGCCCAACCCGCCGGGCTCACCGACAAC
TCGGAGGGGATGGCCTATCT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MAHTALTQPAPAAIPTRSAWQRVRASRGWAGFWFMLPTALILGLFLAYPLLKGIWLSFTNARIGREGVFVGLENYEWLWD
DDVFWLSVFNTCLYTAVASVVKFGVGLYLALLLNKNMPFKSIIRSIVLIPFVVPTVLSAIAFWWIFDSQFSIISWSLRHL
GVIDGNIDFLGEPAMARACVIFANIWRGVPFIAITLLAGLQTVSPSLYEAATLDGASNWQIFSRITLPLLTPIIAVVMTF
SVLFTFTDFQLIWAMTRGGPVNATHLMATLSYQRGILSGTLGEGAAIATAMVPFLLAAIGISWFGLQRRAWQSGESDR

Sequences:

>Translated_318_residues
MAHTALTQPAPAAIPTRSAWQRVRASRGWAGFWFMLPTALILGLFLAYPLLKGIWLSFTNARIGREGVFVGLENYEWLWD
DDVFWLSVFNTCLYTAVASVVKFGVGLYLALLLNKNMPFKSIIRSIVLIPFVVPTVLSAIAFWWIFDSQFSIISWSLRHL
GVIDGNIDFLGEPAMARACVIFANIWRGVPFIAITLLAGLQTVSPSLYEAATLDGASNWQIFSRITLPLLTPIIAVVMTF
SVLFTFTDFQLIWAMTRGGPVNATHLMATLSYQRGILSGTLGEGAAIATAMVPFLLAAIGISWFGLQRRAWQSGESDR
>Mature_317_residues
AHTALTQPAPAAIPTRSAWQRVRASRGWAGFWFMLPTALILGLFLAYPLLKGIWLSFTNARIGREGVFVGLENYEWLWDD
DVFWLSVFNTCLYTAVASVVKFGVGLYLALLLNKNMPFKSIIRSIVLIPFVVPTVLSAIAFWWIFDSQFSIISWSLRHLG
VIDGNIDFLGEPAMARACVIFANIWRGVPFIAITLLAGLQTVSPSLYEAATLDGASNWQIFSRITLPLLTPIIAVVMTFS
VLFTFTDFQLIWAMTRGGPVNATHLMATLSYQRGILSGTLGEGAAIATAMVPFLLAAIGISWFGLQRRAWQSGESDR

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=257, Percent_Identity=29.1828793774319, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1790465, Length=251, Percent_Identity=29.8804780876494, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1789861, Length=266, Percent_Identity=25.9398496240602, Blast_Score=88, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35161; Mature: 35029

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHTALTQPAPAAIPTRSAWQRVRASRGWAGFWFMLPTALILGLFLAYPLLKGIWLSFTN
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ARIGREGVFVGLENYEWLWDDDVFWLSVFNTCLYTAVASVVKFGVGLYLALLLNKNMPFK
CCCCCCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
SIIRSIVLIPFVVPTVLSAIAFWWIFDSQFSIISWSLRHLGVIDGNIDFLGEPAMARACV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCEEECCCCCCCCCHHHHHHHH
IFANIWRGVPFIAITLLAGLQTVSPSLYEAATLDGASNWQIFSRITLPLLTPIIAVVMTF
HHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SVLFTFTDFQLIWAMTRGGPVNATHLMATLSYQRGILSGTLGEGAAIATAMVPFLLAAIG
HHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHCHHCCCCCCCHHHHHHHHHHHHHHHH
ISWFGLQRRAWQSGESDR
HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AHTALTQPAPAAIPTRSAWQRVRASRGWAGFWFMLPTALILGLFLAYPLLKGIWLSFTN
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ARIGREGVFVGLENYEWLWDDDVFWLSVFNTCLYTAVASVVKFGVGLYLALLLNKNMPFK
CCCCCCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
SIIRSIVLIPFVVPTVLSAIAFWWIFDSQFSIISWSLRHLGVIDGNIDFLGEPAMARACV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCEEECCCCCCCCCHHHHHHHH
IFANIWRGVPFIAITLLAGLQTVSPSLYEAATLDGASNWQIFSRITLPLLTPIIAVVMTF
HHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SVLFTFTDFQLIWAMTRGGPVNATHLMATLSYQRGILSGTLGEGAAIATAMVPFLLAAIG
HHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHCHHCCCCCCCHHHHHHHHHHHHHHHH
ISWFGLQRRAWQSGESDR
HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA