| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170749299
Identifier: 170749299
GI number: 170749299
Start: 3044462
End: 3045772
Strand: Reverse
Name: 170749299
Synonym: Mrad2831_2892
Alternate gene names: NA
Gene position: 3045772-3044462 (Counterclockwise)
Preceding gene: 170749300
Following gene: 170749298
Centisome position: 50.11
GC content: 67.73
Gene sequence:
>1311_bases ATGTCCGTTCTCGATCGCCGGTCCCTCCTCGCGGGCGCCGCCGCGGCCGGCCTCGCCGCCGGCGGCGACCTCCTCGGCTT CGCCAGGGCCTGGGCGCAGACCGCGGAATGGAAGCCCGAGCCGGGAGCGAGCCTGTCGCTCCTGCGCTGGAAGCGCTTCG TTCCGGCCGAGGACGAGGCCTTCATGAAGCTGGTCGACGCCTTCACCAAGGCGACGGGCGTCAAGGTCACGGTGAGCAAC GAGTCCTTCGACGACATCCAGCCCAAGGCGTCGGTCGCCGCCAATACCGGGCAGGGGCCCGACATGGTCTGGGGCCTGTT CTCGTTCCCGGCGCTCTTCCCCGACAAGTGCCTGCCGCTCGAGGACGTGGCCGAGTCCCTGGCCAAGAAGTACGGCCCCT GGTTCCCGTCCGCGGAGGCCTACGGCAAGGTCAAGGGCAAGTGGATCGCGATCCCCGTGGCGTTCAACGGCGGCTACCCG AACTACCGCATCTCGGCGATGAAGAAGGCCGGGTTCGACAGGTTCCCCACCGACACCGCGGGCTTCCTCGAGCTCTGTCG CGGCCTGAAGAAGAACAACACGCCGGCCGGCTTCGCCCTCGGCCACGCCACCGGCGACGGCAACACGTGGTGCCACTGGG CGCTCTGGTCCCACGGCGGCAATCTCGTCGACGCCAACGAGAAGATCGTCATCAACTCGCCCGAGACCGCCAAGGCGCTC GAGTACGTCAAGTCCCTGTACGAGACCTTCGTGCCCGGCACGGTGTCGTGGAACGACTCGTCGAACAACAAGGCCTTCCT GGCCGGCGACCTGTACCTGACCAACAACGGCATCTCGATCTACGCGGCGGCCAAGAAGGACAACCCGAAGCTCGCCGAGG ACATGGACCACGCGGTCTGGCCGATCGGACCCGTCGGCAAGCCCACCGAGTTCCAGCTCGCCTTCCCGATCCTGGCCTTC AAGTACTCGAAGGCGCCGAACGCCTGTAAGGCCTTCATCGCCTTCATGATGGAGGCGGCGAACTACAATCCCTGGCTGGA GGCGGCGCAGGGCTACCTCTGCGAGCCCCTGTCGAACTACCCGAAGAACCCGATCTGGACGAGCGACCCGAAGAACGCGG TCTTCGCCGAGGCGGGCCGGCGCTCCCTGGCGGCGGGCGGCCTCGCGCCGGTGAGCGAGCGCATCGCCGCGGTGCTCGCC GACTTCGTCATCGTCGACATGTTCGCCAGCCACTGCACCGGCCGCGAGGACGTGAAGGGCGCAATCAAGAACGCCGAGCG CGCCGCCACCCGCATCTTCCGGAACACCTGA
Upstream 100 bases:
>100_bases GAGACTGGCCGTCGCCTGCCGAGCTGACCCGCGTCGGATCCGGCGCGGGATCGGGGCGCGCGGCGCCCTCAGAAACAGGA TCACCGAGGGAGAAGAAACG
Downstream 100 bases:
>100_bases CCCCACCCGCCGGAGGCGAGACCATGGCGCACACGGCCCTGACGCAGCCCGCCCCGGCCGCAATCCCGACCCGCTCGGCC TGGCAGCGCGTGCGCGCGAG
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MSVLDRRSLLAGAAAAGLAAGGDLLGFARAWAQTAEWKPEPGASLSLLRWKRFVPAEDEAFMKLVDAFTKATGVKVTVSN ESFDDIQPKASVAANTGQGPDMVWGLFSFPALFPDKCLPLEDVAESLAKKYGPWFPSAEAYGKVKGKWIAIPVAFNGGYP NYRISAMKKAGFDRFPTDTAGFLELCRGLKKNNTPAGFALGHATGDGNTWCHWALWSHGGNLVDANEKIVINSPETAKAL EYVKSLYETFVPGTVSWNDSSNNKAFLAGDLYLTNNGISIYAAAKKDNPKLAEDMDHAVWPIGPVGKPTEFQLAFPILAF KYSKAPNACKAFIAFMMEAANYNPWLEAAQGYLCEPLSNYPKNPIWTSDPKNAVFAEAGRRSLAAGGLAPVSERIAAVLA DFVIVDMFASHCTGREDVKGAIKNAERAATRIFRNT
Sequences:
>Translated_436_residues MSVLDRRSLLAGAAAAGLAAGGDLLGFARAWAQTAEWKPEPGASLSLLRWKRFVPAEDEAFMKLVDAFTKATGVKVTVSN ESFDDIQPKASVAANTGQGPDMVWGLFSFPALFPDKCLPLEDVAESLAKKYGPWFPSAEAYGKVKGKWIAIPVAFNGGYP NYRISAMKKAGFDRFPTDTAGFLELCRGLKKNNTPAGFALGHATGDGNTWCHWALWSHGGNLVDANEKIVINSPETAKAL EYVKSLYETFVPGTVSWNDSSNNKAFLAGDLYLTNNGISIYAAAKKDNPKLAEDMDHAVWPIGPVGKPTEFQLAFPILAF KYSKAPNACKAFIAFMMEAANYNPWLEAAQGYLCEPLSNYPKNPIWTSDPKNAVFAEAGRRSLAAGGLAPVSERIAAVLA DFVIVDMFASHCTGREDVKGAIKNAERAATRIFRNT >Mature_435_residues SVLDRRSLLAGAAAAGLAAGGDLLGFARAWAQTAEWKPEPGASLSLLRWKRFVPAEDEAFMKLVDAFTKATGVKVTVSNE SFDDIQPKASVAANTGQGPDMVWGLFSFPALFPDKCLPLEDVAESLAKKYGPWFPSAEAYGKVKGKWIAIPVAFNGGYPN YRISAMKKAGFDRFPTDTAGFLELCRGLKKNNTPAGFALGHATGDGNTWCHWALWSHGGNLVDANEKIVINSPETAKALE YVKSLYETFVPGTVSWNDSSNNKAFLAGDLYLTNNGISIYAAAKKDNPKLAEDMDHAVWPIGPVGKPTEFQLAFPILAFK YSKAPNACKAFIAFMMEAANYNPWLEAAQGYLCEPLSNYPKNPIWTSDPKNAVFAEAGRRSLAAGGLAPVSERIAAVLAD FVIVDMFASHCTGREDVKGAIKNAERAATRIFRNT
Specific function: Probably part of a binding-protein-dependent transport system [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 47138; Mature: 47007
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLDRRSLLAGAAAAGLAAGGDLLGFARAWAQTAEWKPEPGASLSLLRWKRFVPAEDEA CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHH FMKLVDAFTKATGVKVTVSNESFDDIQPKASVAANTGQGPDMVWGLFSFPALFPDKCLPL HHHHHHHHHHCCCEEEEECCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCH EDVAESLAKKYGPWFPSAEAYGKVKGKWIAIPVAFNGGYPNYRISAMKKAGFDRFPTDTA HHHHHHHHHHCCCCCCCHHHCCCCCCEEEEEEEEECCCCCCCEEHHHHHCCCCCCCCCHH GFLELCRGLKKNNTPAGFALGHATGDGNTWCHWALWSHGGNLVDANEKIVINSPETAKAL HHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEECCCEEEEECCCHHHHH EYVKSLYETFVPGTVSWNDSSNNKAFLAGDLYLTNNGISIYAAAKKDNPKLAEDMDHAVW HHHHHHHHHHCCCCEEECCCCCCCEEEEEEEEEECCCEEEEEECCCCCCCHHHHHCCCCC PIGPVGKPTEFQLAFPILAFKYSKAPNACKAFIAFMMEAANYNPWLEAAQGYLCEPLSNY CCCCCCCCCCEEEEHHHHHEEECCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHCC PKNPIWTSDPKNAVFAEAGRRSLAAGGLAPVSERIAAVLADFVIVDMFASHCTGREDVKG CCCCCCCCCCCCCHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH AIKNAERAATRIFRNT HHHHHHHHHHHHHCCC >Mature Secondary Structure SVLDRRSLLAGAAAAGLAAGGDLLGFARAWAQTAEWKPEPGASLSLLRWKRFVPAEDEA CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHH FMKLVDAFTKATGVKVTVSNESFDDIQPKASVAANTGQGPDMVWGLFSFPALFPDKCLPL HHHHHHHHHHCCCEEEEECCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCH EDVAESLAKKYGPWFPSAEAYGKVKGKWIAIPVAFNGGYPNYRISAMKKAGFDRFPTDTA HHHHHHHHHHCCCCCCCHHHCCCCCCEEEEEEEEECCCCCCCEEHHHHHCCCCCCCCCHH GFLELCRGLKKNNTPAGFALGHATGDGNTWCHWALWSHGGNLVDANEKIVINSPETAKAL HHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEECCCEEEEECCCHHHHH EYVKSLYETFVPGTVSWNDSSNNKAFLAGDLYLTNNGISIYAAAKKDNPKLAEDMDHAVW HHHHHHHHHHCCCCEEECCCCCCCEEEEEEEEEECCCEEEEEECCCCCCCHHHHHCCCCC PIGPVGKPTEFQLAFPILAFKYSKAPNACKAFIAFMMEAANYNPWLEAAQGYLCEPLSNY CCCCCCCCCCEEEEHHHHHEEECCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHCC PKNPIWTSDPKNAVFAEAGRRSLAAGGLAPVSERIAAVLADFVIVDMFASHCTGREDVKG CCCCCCCCCCCCCHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH AIKNAERAATRIFRNT HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]