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The map label for this gene is ycjP [H]

Identifier: 170749297

GI number: 170749297

Start: 3042547

End: 3043485

Strand: Reverse

Name: ycjP [H]

Synonym: Mrad2831_2890

Alternate gene names: 170749297

Gene position: 3043485-3042547 (Counterclockwise)

Preceding gene: 170749298

Following gene: 170749296

Centisome position: 50.08

GC content: 66.03

Gene sequence:

>939_bases
ATGAGCGCGCCCGCACCGCCGGCCCACGCCGACCCGCACCTCGCCCCCGTCCTCGCGGCCCAACCCGCCGGGCTCACCGA
CAACTCGGAGGGGATGGCCTATCTCGAGCGCCTGCCGCGGCGGCTCGTGACGACCTACCTGCCGCTCCTCATCATCCTCG
CCGTGCTGCTGTTCCCGTTCTACTGGATGGCGCTCACCGCCATCAAACCGGACGAGCAGCTGATCGATATGGAGCGGTTC
AACCCGTTCTGGGTCGTGGACCCGACGCTCAAGCACATCAACAAGCTCCTCTTCGAGACGCAGTATCCGCGCTGGCTCTG
GAACACGATGTACGTGTCGGTGGCGGCGACCGTGCTGTCGCTGTTTGCGAGCGTGCTCGCCGCCTACGCGTGCGTCCGCG
TGCGCTACCGGGGCGCCGGCTGGGTCGGGGCGGCGATCTTCCTCGCCTACCTCGTGCCGCCCTCCATCCTGTTCATCCCG
CTCGCCACGATCATCCAGGCCTACGGCCTGTTCGACTCGCCGATCGCCCTGATCCTCGCCTATCCGACGATCCTGATCCC
GTTCTCGACCTGGCTCCTGATGGGCTACTTCAAGACCATCCCCTACGAGCTCGAGGAATGCGCGCTGATGGACGGCGCCA
GCCGGTGGCAGATCCTCACCAAGATCATCCTGCCGCTCGCCTTCCCGGGGCTGATCTCGGCGGGGATCTTCTCGCTGACC
CTGTGCTGGAACGAGTTCATCTACGCGCTGACCTTCCTGTCCTCGACGCAGAACAAGACGGTGCCCATCGCCGTGGTGAG
CGAGTTCGTGGACGGCGACGTCTACAAGTGGGGCTCGCTGATGGCCGGCGCGCTGCTCGGCTCGCTGCCGCTGGTGATCC
TCTACTCGTTCTTCGTCGAGTACTACGTGTCCGCGCTCACCGGCGCCGTGAAGGAGTGA

Upstream 100 bases:

>100_bases
CGGCCATCGCCACCGCCATGGTGCCGTTCCTGCTCGCGGCCATCGGCATCTCGTGGTTCGGCCTGCAGCGAAGGGCTTGG
CAGTCCGGGGAGTCCGACCG

Downstream 100 bases:

>100_bases
GGGGACGCGTCAGACCATCGTTCTAGCGAGCGCGGCAAAGCGAGCCAGGGCAGCGGGACGTCGGTCGGCGTGGCGCTGCC
CGGATCGCTTCGCTCTGCTC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MSAPAPPAHADPHLAPVLAAQPAGLTDNSEGMAYLERLPRRLVTTYLPLLIILAVLLFPFYWMALTAIKPDEQLIDMERF
NPFWVVDPTLKHINKLLFETQYPRWLWNTMYVSVAATVLSLFASVLAAYACVRVRYRGAGWVGAAIFLAYLVPPSILFIP
LATIIQAYGLFDSPIALILAYPTILIPFSTWLLMGYFKTIPYELEECALMDGASRWQILTKIILPLAFPGLISAGIFSLT
LCWNEFIYALTFLSSTQNKTVPIAVVSEFVDGDVYKWGSLMAGALLGSLPLVILYSFFVEYYVSALTGAVKE

Sequences:

>Translated_312_residues
MSAPAPPAHADPHLAPVLAAQPAGLTDNSEGMAYLERLPRRLVTTYLPLLIILAVLLFPFYWMALTAIKPDEQLIDMERF
NPFWVVDPTLKHINKLLFETQYPRWLWNTMYVSVAATVLSLFASVLAAYACVRVRYRGAGWVGAAIFLAYLVPPSILFIP
LATIIQAYGLFDSPIALILAYPTILIPFSTWLLMGYFKTIPYELEECALMDGASRWQILTKIILPLAFPGLISAGIFSLT
LCWNEFIYALTFLSSTQNKTVPIAVVSEFVDGDVYKWGSLMAGALLGSLPLVILYSFFVEYYVSALTGAVKE
>Mature_311_residues
SAPAPPAHADPHLAPVLAAQPAGLTDNSEGMAYLERLPRRLVTTYLPLLIILAVLLFPFYWMALTAIKPDEQLIDMERFN
PFWVVDPTLKHINKLLFETQYPRWLWNTMYVSVAATVLSLFASVLAAYACVRVRYRGAGWVGAAIFLAYLVPPSILFIPL
ATIIQAYGLFDSPIALILAYPTILIPFSTWLLMGYFKTIPYELEECALMDGASRWQILTKIILPLAFPGLISAGIFSLTL
CWNEFIYALTFLSSTQNKTVPIAVVSEFVDGDVYKWGSLMAGALLGSLPLVILYSFFVEYYVSALTGAVKE

Specific function: Probably part of the binding-protein-dependent transport system ycjNOP. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=283, Percent_Identity=34.982332155477, Blast_Score=155, Evalue=2e-39,
Organism=Escherichia coli, GI1790464, Length=214, Percent_Identity=27.5700934579439, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1789860, Length=286, Percent_Identity=24.4755244755245, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34705; Mature: 34574

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPAPPAHADPHLAPVLAAQPAGLTDNSEGMAYLERLPRRLVTTYLPLLIILAVLLFPF
CCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YWMALTAIKPDEQLIDMERFNPFWVVDPTLKHINKLLFETQYPRWLWNTMYVSVAATVLS
HHHHHHHCCCHHHHHHHHHCCCEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LFASVLAAYACVRVRYRGAGWVGAAIFLAYLVPPSILFIPLATIIQAYGLFDSPIALILA
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHH
YPTILIPFSTWLLMGYFKTIPYELEECALMDGASRWQILTKIILPLAFPGLISAGIFSLT
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LCWNEFIYALTFLSSTQNKTVPIAVVSEFVDGDVYKWGSLMAGALLGSLPLVILYSFFVE
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YYVSALTGAVKE
HHHHHHHHHHCC
>Mature Secondary Structure 
SAPAPPAHADPHLAPVLAAQPAGLTDNSEGMAYLERLPRRLVTTYLPLLIILAVLLFPF
CCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YWMALTAIKPDEQLIDMERFNPFWVVDPTLKHINKLLFETQYPRWLWNTMYVSVAATVLS
HHHHHHHCCCHHHHHHHHHCCCEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LFASVLAAYACVRVRYRGAGWVGAAIFLAYLVPPSILFIPLATIIQAYGLFDSPIALILA
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHH
YPTILIPFSTWLLMGYFKTIPYELEECALMDGASRWQILTKIILPLAFPGLISAGIFSLT
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LCWNEFIYALTFLSSTQNKTVPIAVVSEFVDGDVYKWGSLMAGALLGSLPLVILYSFFVE
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YYVSALTGAVKE
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]