| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is murE [H]
Identifier: 170748780
GI number: 170748780
Start: 2500963
End: 2502420
Strand: Reverse
Name: murE [H]
Synonym: Mrad2831_2362
Alternate gene names: 170748780
Gene position: 2502420-2500963 (Counterclockwise)
Preceding gene: 170748781
Following gene: 170748779
Centisome position: 41.17
GC content: 76.95
Gene sequence:
>1458_bases ATGAGCGCGCGGCTCGCCGACCTCTTCCCCGAGGCCGCCGGCCCCGCCGCGGACCTGACCGTCTCGGACCTCACGGCCGA CAGCCGGCAGGTCGCGACCGGCACGGTGTTCGTCGCCGTGCCGGGGACGAAGGCCGACGGCCGCCGCTTCGCCGCGCAGG CCGCCCAGCGCGGCGCCGCCGCGGTGGCCGGTGAGGGGACCCGTCCCGCCGACCTGCCGGACGCGGTCGCCTGGATCCCC GTCGCCGACGCGCGCCGGGCGCTCGCCCTGGCCGCGGCCCGTCTCGCGGGTCCGCAGCCCGAGACCGTCGTGGCGGTGAC CGGCACCGCCGGGAAGAGCTCGGTGGCGGACTTCGTCCGCCAGATCCTGGCGCGCCTCGGCCGCGACGCCGCGAGCCTCG GCACCGTCGGTATCGTCACCGGTCGCGGCGCGCAGTACGGCTCCCTCACCACCCCGGACCCGGTGACGCTGCACCGGACG CTGGCGCGGCTCGCCGCGGAGGGCGTCACCGACCTCGCCATGGAGGCGTCCTCCCACGGGATCGAGCAGCGCCGGCTCGA CGGCGTGCGGCTGGACGCGGCCGGCTTCACCAATCTCGGCCGCGATCATCTCGACTATCACGCGAGCATCGAGGAGTACC TCGCGGCCAAGCTGCGCCTGTTCACCGACCTGCTGCCGCCGGGACGCCCCGCCATCGTCAACGCCGACGGCGCCTATGCC GAGCGGGTGATCGCCGCGGCCGAGGCCGCCGGCCGGCCGGTCCGCACGGTCGGGCGCGGCGGCCGGGACCTGCGCGTCGA GGCGGTCCGCACGGAGGGGTTCGCGCAGGCCGCCCGCGTCCTGTTCGCGGGCCGGGCCCGGGACCTGCGCCTGCCGCTCG TCGGCGAGTTCCAGGTCGAGAACGCCCTGGTGGCGGCCGGCCTCGCGCTGGCCACCCCGGCGGGGGCGGCCGATCCCGAC GGGGTCTTCGCGGCCCTCGACCACCTCACGGGCGTCCCCGGCCGCATGGAGCGGATCGGCGAGGCGCGGGGCGGACTCTG TCTCGTCGACTACGCGCACAAGCCCGAGGCCCTGGAGAGCGTCCTGACCGCCCTGCGGCCCTTCGCGACCGGCCGGCTGG TCGCGGTGTTCGGCTGCGGCGGCGACCGCGACCGGGGCAAGCGGCCCCTGATGGGCGCCATCGCGCAGCGGCTCGCCGAC GTCGTGATCGTCACGGACGACAACCCGCGCACAGAGGACGCGGCCGCCATCCGCCGGGCCATCCTGGACGCGGCGCCGGG CGCGGAGGAGATCGGCGACCGGTCGGAGGCGATTCACAGCGCCGTCAGCCGGCTCGGACCGGGCGACGTGCTGGTCGTGG CCGGCAAGGGTCATGAAACCGGCCAGATCGTGGGAGATCGCACGCTGCCGTTCTCGGACCACGCGGTCCTGCGCGCCGCG ATCGCCGCGGCGGCCTGA
Upstream 100 bases:
>100_bases CGAGCCGCCGGTGAGGCCGTTCCCGCAGATGGTCAAGCTCAATGCCTACCACGTCAACCAGCTCGGCGGCCCGTGAGATT GGATCGATGAGGGTGGATCG
Downstream 100 bases:
>100_bases GGACGACGGGGGACCGACGATGACCGCACTCTGGACGCGGGAGGAGCTGGAATCCGCGACGGGCGGCTGCCTGACCGGCG CCGAGCGCGCCATCTCGGGC
Product: UDP-N-acetylmuramyl-tripeptide synthetase
Products: NA
Alternate protein names: Meso-A2pm-adding enzyme; Meso-diaminopimelate-adding enzyme; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase; UDP-MurNAc-tripeptide synthetase; UDP-N-acetylmuramyl-tripeptide synthetase [H]
Number of amino acids: Translated: 485; Mature: 484
Protein sequence:
>485_residues MSARLADLFPEAAGPAADLTVSDLTADSRQVATGTVFVAVPGTKADGRRFAAQAAQRGAAAVAGEGTRPADLPDAVAWIP VADARRALALAAARLAGPQPETVVAVTGTAGKSSVADFVRQILARLGRDAASLGTVGIVTGRGAQYGSLTTPDPVTLHRT LARLAAEGVTDLAMEASSHGIEQRRLDGVRLDAAGFTNLGRDHLDYHASIEEYLAAKLRLFTDLLPPGRPAIVNADGAYA ERVIAAAEAAGRPVRTVGRGGRDLRVEAVRTEGFAQAARVLFAGRARDLRLPLVGEFQVENALVAAGLALATPAGAADPD GVFAALDHLTGVPGRMERIGEARGGLCLVDYAHKPEALESVLTALRPFATGRLVAVFGCGGDRDRGKRPLMGAIAQRLAD VVIVTDDNPRTEDAAAIRRAILDAAPGAEEIGDRSEAIHSAVSRLGPGDVLVVAGKGHETGQIVGDRTLPFSDHAVLRAA IAAAA
Sequences:
>Translated_485_residues MSARLADLFPEAAGPAADLTVSDLTADSRQVATGTVFVAVPGTKADGRRFAAQAAQRGAAAVAGEGTRPADLPDAVAWIP VADARRALALAAARLAGPQPETVVAVTGTAGKSSVADFVRQILARLGRDAASLGTVGIVTGRGAQYGSLTTPDPVTLHRT LARLAAEGVTDLAMEASSHGIEQRRLDGVRLDAAGFTNLGRDHLDYHASIEEYLAAKLRLFTDLLPPGRPAIVNADGAYA ERVIAAAEAAGRPVRTVGRGGRDLRVEAVRTEGFAQAARVLFAGRARDLRLPLVGEFQVENALVAAGLALATPAGAADPD GVFAALDHLTGVPGRMERIGEARGGLCLVDYAHKPEALESVLTALRPFATGRLVAVFGCGGDRDRGKRPLMGAIAQRLAD VVIVTDDNPRTEDAAAIRRAILDAAPGAEEIGDRSEAIHSAVSRLGPGDVLVVAGKGHETGQIVGDRTLPFSDHAVLRAA IAAAA >Mature_484_residues SARLADLFPEAAGPAADLTVSDLTADSRQVATGTVFVAVPGTKADGRRFAAQAAQRGAAAVAGEGTRPADLPDAVAWIPV ADARRALALAAARLAGPQPETVVAVTGTAGKSSVADFVRQILARLGRDAASLGTVGIVTGRGAQYGSLTTPDPVTLHRTL ARLAAEGVTDLAMEASSHGIEQRRLDGVRLDAAGFTNLGRDHLDYHASIEEYLAAKLRLFTDLLPPGRPAIVNADGAYAE RVIAAAEAAGRPVRTVGRGGRDLRVEAVRTEGFAQAARVLFAGRARDLRLPLVGEFQVENALVAAGLALATPAGAADPDG VFAALDHLTGVPGRMERIGEARGGLCLVDYAHKPEALESVLTALRPFATGRLVAVFGCGGDRDRGKRPLMGAIAQRLADV VIVTDDNPRTEDAAAIRRAILDAAPGAEEIGDRSEAIHSAVSRLGPGDVLVVAGKGHETGQIVGDRTLPFSDHAVLRAAI AAAA
Specific function: Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan [H]
COG id: COG0769
COG function: function code M; UDP-N-acetylmuramyl tripeptide synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family. MurE subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786273, Length=484, Percent_Identity=38.0165289256198, Blast_Score=227, Evalue=2e-60, Organism=Escherichia coli, GI1786274, Length=345, Percent_Identity=28.9855072463768, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR005761 [H]
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.13 [H]
Molecular weight: Translated: 49960; Mature: 49829
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARLADLFPEAAGPAADLTVSDLTADSRQVATGTVFVAVPGTKADGRRFAAQAAQRGAA CCCCHHHHCCCCCCCCCCCCHHHCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHCCCE AVAGEGTRPADLPDAVAWIPVADARRALALAAARLAGPQPETVVAVTGTAGKSSVADFVR EECCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHH QILARLGRDAASLGTVGIVTGRGAQYGSLTTPDPVTLHRTLARLAAEGVTDLAMEASSHG HHHHHHCCCHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCC IEQRRLDGVRLDAAGFTNLGRDHLDYHASIEEYLAAKLRLFTDLLPPGRPAIVNADGAYA CHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHH ERVIAAAEAAGRPVRTVGRGGRDLRVEAVRTEGFAQAARVLFAGRARDLRLPLVGEFQVE HHHHHHHHHCCCCHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCEECCCCCCHHHH NALVAAGLALATPAGAADPDGVFAALDHLTGVPGRMERIGEARGGLCLVDYAHKPEALES HHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCCCHHHHH VLTALRPFATGRLVAVFGCGGDRDRGKRPLMGAIAQRLADVVIVTDDNPRTEDAAAIRRA HHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCHHHHHHHHH ILDAAPGAEEIGDRSEAIHSAVSRLGPGDVLVVAGKGHETGQIVGDRTLPFSDHAVLRAA HHHCCCCHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCEECCCCCCCCHHHHHHHH IAAAA HHHCC >Mature Secondary Structure SARLADLFPEAAGPAADLTVSDLTADSRQVATGTVFVAVPGTKADGRRFAAQAAQRGAA CCCHHHHCCCCCCCCCCCCHHHCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHCCCE AVAGEGTRPADLPDAVAWIPVADARRALALAAARLAGPQPETVVAVTGTAGKSSVADFVR EECCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHH QILARLGRDAASLGTVGIVTGRGAQYGSLTTPDPVTLHRTLARLAAEGVTDLAMEASSHG HHHHHHCCCHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCC IEQRRLDGVRLDAAGFTNLGRDHLDYHASIEEYLAAKLRLFTDLLPPGRPAIVNADGAYA CHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHH ERVIAAAEAAGRPVRTVGRGGRDLRVEAVRTEGFAQAARVLFAGRARDLRLPLVGEFQVE HHHHHHHHHCCCCHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCEECCCCCCHHHH NALVAAGLALATPAGAADPDGVFAALDHLTGVPGRMERIGEARGGLCLVDYAHKPEALES HHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCCCHHHHH VLTALRPFATGRLVAVFGCGGDRDRGKRPLMGAIAQRLADVVIVTDDNPRTEDAAAIRRA HHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCHHHHHHHHH ILDAAPGAEEIGDRSEAIHSAVSRLGPGDVLVVAGKGHETGQIVGDRTLPFSDHAVLRAA HHHCCCCHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCEECCCCCCCCHHHHHHHH IAAAA HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]