| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is ymaE [H]
Identifier: 170747340
GI number: 170747340
Start: 949853
End: 950728
Strand: Reverse
Name: ymaE [H]
Synonym: Mrad2831_0907
Alternate gene names: 170747340
Gene position: 950728-949853 (Counterclockwise)
Preceding gene: 170747341
Following gene: 170747336
Centisome position: 15.64
GC content: 71.12
Gene sequence:
>876_bases ATGCCCGGCTATCTGCCCTTCGCGGGCGCCCTGAAGCTGCCCGCCTATACCTGCGACAATTGCGGGTTCTGGCAGCGGCA CTTCGAGGCGCCGGCCGCCTGCCCGATGTGCCTCGACGCCCGCCACGTCGTGCCGCAGGACGGGTGGCGCTTCCGCACCG CCCGCGAGGCGCAGGAGGCCTTCCCCTGCCACTGGCAGGAACTCGAGCCCGGCGTCTGGCGCTTCTGGAACGAGCCGGTC TCCGGCATCGGCCCGTCCGCCTACCTGATCCAGACCGAGCACGGGAACATGGGCTTCGAGGGCTGCCCGGTCTTCAGCGA GGCCGCCCTCGACCAGATCGAGCGGCTCGGCGGGATGACCGTCCTCTCGGCCTCGCACCCGCACTCCTACGGGGCGCTGC CGCAGCTCCAGGACCGGTTCGACCCGGAGCTGTGCCTGCCGGCGGCCGACTTCACCTGGAGTGCCGCGCTCCAGGTGAGC TGGCCCTACGACGATTTTCTGGAGCCGCTGCCGGGGTTGGAGCTGCACCGCACCGCGGGTCATTTCGATGGCCACGCGAT CCTGTACGACCGTGGGCGAAAAATCTGCTTCTGCGGCGACGCGCTGAAGTTCGAGCTCGACCCCGCGGATTTCCGCCGGG CCACCACGATCTCGGCCCACAAGGCCTTCGTGCGCGGGGTGCCGCTCACGCCGAGCGAGCTGCGCCGCTACCGCGACGTG TTCGAGCGCCTCGACTTCGCCCAGACCTGGACGCCGTTCGAGCCCGCCCGGAATTGCGGGCGGCCCGAGGTCCTGGCCCT GCTCGACCAGCTGATGAGCGGCCGGTCGCACGCCGCGCCGGTGCCGCTCGACAGCCTGCGGGTTCAGGGCCGGTAG
Upstream 100 bases:
>100_bases TCGCGCTGCCCTGGGTCGCTTCGCTCCGCTCGCGGCGGCGGAGAAGGCGACTGAGACTGCGGCCGCATCACACGCGCCGC CCCCGAAGAGGTCCACGACG
Downstream 100 bases:
>100_bases AGCGGGTCGTTCTCCAGGCGGATCGGCTGGCCGTGGGGCGTCGCCTCCGCGGCCCGCAGGAAGGCCTCGGTCCGCGCCGC GACGCTCTCGGGTCCCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MPGYLPFAGALKLPAYTCDNCGFWQRHFEAPAACPMCLDARHVVPQDGWRFRTAREAQEAFPCHWQELEPGVWRFWNEPV SGIGPSAYLIQTEHGNMGFEGCPVFSEAALDQIERLGGMTVLSASHPHSYGALPQLQDRFDPELCLPAADFTWSAALQVS WPYDDFLEPLPGLELHRTAGHFDGHAILYDRGRKICFCGDALKFELDPADFRRATTISAHKAFVRGVPLTPSELRRYRDV FERLDFAQTWTPFEPARNCGRPEVLALLDQLMSGRSHAAPVPLDSLRVQGR
Sequences:
>Translated_291_residues MPGYLPFAGALKLPAYTCDNCGFWQRHFEAPAACPMCLDARHVVPQDGWRFRTAREAQEAFPCHWQELEPGVWRFWNEPV SGIGPSAYLIQTEHGNMGFEGCPVFSEAALDQIERLGGMTVLSASHPHSYGALPQLQDRFDPELCLPAADFTWSAALQVS WPYDDFLEPLPGLELHRTAGHFDGHAILYDRGRKICFCGDALKFELDPADFRRATTISAHKAFVRGVPLTPSELRRYRDV FERLDFAQTWTPFEPARNCGRPEVLALLDQLMSGRSHAAPVPLDSLRVQGR >Mature_290_residues PGYLPFAGALKLPAYTCDNCGFWQRHFEAPAACPMCLDARHVVPQDGWRFRTAREAQEAFPCHWQELEPGVWRFWNEPVS GIGPSAYLIQTEHGNMGFEGCPVFSEAALDQIERLGGMTVLSASHPHSYGALPQLQDRFDPELCLPAADFTWSAALQVSW PYDDFLEPLPGLELHRTAGHFDGHAILYDRGRKICFCGDALKFELDPADFRRATTISAHKAFVRGVPLTPSELRRYRDVF ERLDFAQTWTPFEPARNCGRPEVLALLDQLMSGRSHAAPVPLDSLRVQGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32727; Mature: 32596
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGYLPFAGALKLPAYTCDNCGFWQRHFEAPAACPMCLDARHVVPQDGWRFRTAREAQEA CCCCCCCCCCCCCCCEECCCCCHHHHHHCCCCCCCHHHCCCCCCCCCCCEEHHHHHHHHH FPCHWQELEPGVWRFWNEPVSGIGPSAYLIQTEHGNMGFEGCPVFSEAALDQIERLGGMT CCCCHHHCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCEE VLSASHPHSYGALPQLQDRFDPELCLPAADFTWSAALQVSWPYDDFLEPLPGLELHRTAG EEECCCCCCCCCCCHHHHHCCCCEECCCCCCCEEEEEEEECCHHHHHCCCCCCEEECCCC HFDGHAILYDRGRKICFCGDALKFELDPADFRRATTISAHKAFVRGVPLTPSELRRYRDV CCCCEEEEEECCCEEEEECCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH FERLDFAQTWTPFEPARNCGRPEVLALLDQLMSGRSHAAPVPLDSLRVQGR HHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHCEECCC >Mature Secondary Structure PGYLPFAGALKLPAYTCDNCGFWQRHFEAPAACPMCLDARHVVPQDGWRFRTAREAQEA CCCCCCCCCCCCCCEECCCCCHHHHHHCCCCCCCHHHCCCCCCCCCCCEEHHHHHHHHH FPCHWQELEPGVWRFWNEPVSGIGPSAYLIQTEHGNMGFEGCPVFSEAALDQIERLGGMT CCCCHHHCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCEE VLSASHPHSYGALPQLQDRFDPELCLPAADFTWSAALQVSWPYDDFLEPLPGLELHRTAG EEECCCCCCCCCCCHHHHHCCCCEECCCCCCCEEEEEEEECCHHHHHCCCCCCEEECCCC HFDGHAILYDRGRKICFCGDALKFELDPADFRRATTISAHKAFVRGVPLTPSELRRYRDV CCCCEEEEEECCCEEEEECCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH FERLDFAQTWTPFEPARNCGRPEVLALLDQLMSGRSHAAPVPLDSLRVQGR HHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]