Click here to switch to the map view.

The map label for this gene is htrE [H]

Identifier: 170679612

GI number: 170679612

Start: 163230

End: 165830

Strand: Reverse

Name: htrE [H]

Synonym: EcSMS35_0150

Alternate gene names: 170679612

Gene position: 165830-163230 (Counterclockwise)

Preceding gene: 170680970

Following gene: 170683790

Centisome position: 3.27

GC content: 44.21

Gene sequence:

>2601_bases
GTGTCCCGAAAAATCATAAAAACGCATAATAACAAACTTACATATATAGCCTCGTTTTGCGCATTGCTATTAAGCCCCTG
TGCCATAAGCGCTGAACACGTTGAATATGATAATACCTTTTTGATGGGGCAAGATGCTTTTAACATCGACCTTAGTCGGT
ATACCGAAGGTAACCCTACCTTGCCCGGCGTGTATGACGTCAGTGTTTATATCAATGATCAACCGGTTATCAACCAAAGC
ATTTCCTTTATTACCCTCGAAGGTAAGAAGAATGCGCAGGCTTGTATCACCCTGAAGAATTTATTGCAGTTTCACATTAA
TAAACCAGATATAAATGCCGAGAATTCCATCCTTCTACAGCGCGAAGGCGAACTCGGAGATTGTCTTGATTTAGCAAATA
TCATTCCTCAGGCCTCGGTTCATTATGACGTCAACGATCAACGACTGGACATCAATGTTCCTCAAGCCTGGGTAATGAAG
AATTACCAAAACTATGTTGACTCTTCACTGTGGGAAAACGGTATTAACGCCGCAATGCTAGCCTACAACGTCAACGCATA
TCACAGCGAAATTCCGGACAGAAAAAACGACAGTGTTTACGCCGCATTTAACGGCGGTATAAATCTGGGGGCATGGCGAC
TTCGCGCAACCGGCAACTACAACTGGATGACCAATGTAGGCAGTGATTACGATTTTCAGAATCGCTATTTGCAGCGCGAC
CTGGCCTCTTTGCGTTCACAGTTAATAGTGGGTGAGTCATACACAACTGGGGAAACCTTTGATGCTGTCAGTATTCGCGG
TATTCGTTTATACAGCGACAGCCGAATGCTACCGCCTGCGTTAGCTAGTTTTGCGCCTATTATTCATGGTGTCGCTAACA
CCAACGCAAAAGTCACCATTACCCAGGGCGGGTATAAAATATATGAAACTACTGTACCGCCGGGAGCATTTGTTATTGAT
GATTTAAGCCCATCAGGCTACGGCAGCGATCTCATTATCACAATCGAAGAATCTGATGGCATAAAACGAACTTTTTCCCA
GCCATTTTCTTCGGTAATTCAGATGCAACGCCCTGGTGTTGGAAGATGGGACATCAGTGCTGGTCAGGTATTAAAAGACG
ATATTCAAAATGAGCCAAATTTGTTCCAGGCCAGCTACTACTATGGTCTGAACAACTATCTTACAGGTTATACCGGTATT
CAAATTACCGATAATAACTATACTGCCGGGCTGTTGGGCCTTGGCCTGAATACCGCGTACGGTGCGTTTTCAGTCGATGT
AACCCACTCGGATGTGCAAATTCCGGACGATAAAACCTACCGCGGGCAAAGTTATCGCATCTCCTGGAATAAGTTATTTG
AAGATACCAGAACCTCGCTCAATATCGCCGCTTACCGTTATTCAACCCAGAATTATCTGGGGCTTAACGATGCACTGACA
TTGATCGATGAAGTAAAACATCCGGAACAGGACCTGGAACCTAAAAATATGCGTAACTATTCACGCATGAAAAATCAGGT
TACGGTTAGTATTAACCAACCCCTCAAGTTTGAAAAGAAAGACTATGGCTCATTCTATCTTGCCGGAAGTTGGTCTGACT
ATTGGGCGGACGGACAAAATAATACTAACTACTCCATTGGTTATAGTAACAGCGCATCGTGGGGAAGCTACAGCATTAGT
GCCCAACGGTCCTGGAGCCAGGACGGCGGTAATGAAGACAGCATCTATCTAAGCTTTAGCATTCCTATCGAAAAGTTACT
GGGTTCAGAACATCGCGACTCTGGTTTTCAGAGCATTGATACTCAGTTAAATAGTGATTTCAACGGCAGCAATCAACTCA
GTATCAGCAGTAGTGGTTATAGCACCGAAAACCATATCAGTTATAGCGTCAATACAGGCTATTCGATGATGAAATCCAGT
GATGATTTGGGCTATATCGGCGGATATGCAAGCTATGAATCTCCCTGGGGAACTCTTTCCAGTTCAGTTTCCGCAAGCAG
TGATAATAGCCGTCAAATCTCATTTAATACCGACGGCGGATTTGTTTTACATAGCGGCGGCCTGACCTTCAGTAATGACA
GCTTTAGCGACTCAGACACTCTGGCCGTTGTACAAGCGCCAGGAGCTAAAGGGGCGCGTATTAACTATGGTAATAGTACG
ATAGATCGTTGGGGATATGGTGTTACTAACGCGCTCTCCCCTTATCATGAAAACCGAATTGCACTCGATATTAACGGTCT
GGAAAATGACGTTGAATTGAAAAGTACCAGTGCTATTACTGTCCCCCGCCAAGGGTCTGTTGTCTTTGCTGGTTTTGAAA
CAGTTCAGGGACAATCAGCGATTATGAACATCAAGCGAACTGACGGTAAAAACATTCCGTTTGCCGCAGATATTTATGAC
GAGAACGGAAATATTATTGGCAATGTAGGGCAAGGTGGTCAGGCCTTTGTTCGAGGTATAGAACAACAAGGTAACATACG
TATCAACTGGCTTGACGACGGTAAACCTGTCACTTGCCTTGCTCATTACCAGCAGAGCGCAGCACCAGAAAAAATAGCGC
AAACTATTATTCTGAATGGAATTAGTTGTCAGATTCAGTAA

Upstream 100 bases:

>100_bases
GCCAAAGTGCATTTCTTCGCCATAAATGACTTTGGTGGTGCAATTGAAGGCAATGCCAGCCTGTAACTAAATCAGGAATA
AACGCAGCAGGAAGCACAAC

Downstream 100 bases:

>100_bases
CAACAGGGAATTTCACATAATGAGAATAACACTGCATAAATTGGCAATACTGACTGGATTATTTTTATCATCCTCTGTAC
TTGCAACAGACATTAATGTT

Product: putative outer membrane usher protein

Products: NA

Alternate protein names: Heat shock protein E [H]

Number of amino acids: Translated: 866; Mature: 865

Protein sequence:

>866_residues
MSRKIIKTHNNKLTYIASFCALLLSPCAISAEHVEYDNTFLMGQDAFNIDLSRYTEGNPTLPGVYDVSVYINDQPVINQS
ISFITLEGKKNAQACITLKNLLQFHINKPDINAENSILLQREGELGDCLDLANIIPQASVHYDVNDQRLDINVPQAWVMK
NYQNYVDSSLWENGINAAMLAYNVNAYHSEIPDRKNDSVYAAFNGGINLGAWRLRATGNYNWMTNVGSDYDFQNRYLQRD
LASLRSQLIVGESYTTGETFDAVSIRGIRLYSDSRMLPPALASFAPIIHGVANTNAKVTITQGGYKIYETTVPPGAFVID
DLSPSGYGSDLIITIEESDGIKRTFSQPFSSVIQMQRPGVGRWDISAGQVLKDDIQNEPNLFQASYYYGLNNYLTGYTGI
QITDNNYTAGLLGLGLNTAYGAFSVDVTHSDVQIPDDKTYRGQSYRISWNKLFEDTRTSLNIAAYRYSTQNYLGLNDALT
LIDEVKHPEQDLEPKNMRNYSRMKNQVTVSINQPLKFEKKDYGSFYLAGSWSDYWADGQNNTNYSIGYSNSASWGSYSIS
AQRSWSQDGGNEDSIYLSFSIPIEKLLGSEHRDSGFQSIDTQLNSDFNGSNQLSISSSGYSTENHISYSVNTGYSMMKSS
DDLGYIGGYASYESPWGTLSSSVSASSDNSRQISFNTDGGFVLHSGGLTFSNDSFSDSDTLAVVQAPGAKGARINYGNST
IDRWGYGVTNALSPYHENRIALDINGLENDVELKSTSAITVPRQGSVVFAGFETVQGQSAIMNIKRTDGKNIPFAADIYD
ENGNIIGNVGQGGQAFVRGIEQQGNIRINWLDDGKPVTCLAHYQQSAAPEKIAQTIILNGISCQIQ

Sequences:

>Translated_866_residues
MSRKIIKTHNNKLTYIASFCALLLSPCAISAEHVEYDNTFLMGQDAFNIDLSRYTEGNPTLPGVYDVSVYINDQPVINQS
ISFITLEGKKNAQACITLKNLLQFHINKPDINAENSILLQREGELGDCLDLANIIPQASVHYDVNDQRLDINVPQAWVMK
NYQNYVDSSLWENGINAAMLAYNVNAYHSEIPDRKNDSVYAAFNGGINLGAWRLRATGNYNWMTNVGSDYDFQNRYLQRD
LASLRSQLIVGESYTTGETFDAVSIRGIRLYSDSRMLPPALASFAPIIHGVANTNAKVTITQGGYKIYETTVPPGAFVID
DLSPSGYGSDLIITIEESDGIKRTFSQPFSSVIQMQRPGVGRWDISAGQVLKDDIQNEPNLFQASYYYGLNNYLTGYTGI
QITDNNYTAGLLGLGLNTAYGAFSVDVTHSDVQIPDDKTYRGQSYRISWNKLFEDTRTSLNIAAYRYSTQNYLGLNDALT
LIDEVKHPEQDLEPKNMRNYSRMKNQVTVSINQPLKFEKKDYGSFYLAGSWSDYWADGQNNTNYSIGYSNSASWGSYSIS
AQRSWSQDGGNEDSIYLSFSIPIEKLLGSEHRDSGFQSIDTQLNSDFNGSNQLSISSSGYSTENHISYSVNTGYSMMKSS
DDLGYIGGYASYESPWGTLSSSVSASSDNSRQISFNTDGGFVLHSGGLTFSNDSFSDSDTLAVVQAPGAKGARINYGNST
IDRWGYGVTNALSPYHENRIALDINGLENDVELKSTSAITVPRQGSVVFAGFETVQGQSAIMNIKRTDGKNIPFAADIYD
ENGNIIGNVGQGGQAFVRGIEQQGNIRINWLDDGKPVTCLAHYQQSAAPEKIAQTIILNGISCQIQ
>Mature_865_residues
SRKIIKTHNNKLTYIASFCALLLSPCAISAEHVEYDNTFLMGQDAFNIDLSRYTEGNPTLPGVYDVSVYINDQPVINQSI
SFITLEGKKNAQACITLKNLLQFHINKPDINAENSILLQREGELGDCLDLANIIPQASVHYDVNDQRLDINVPQAWVMKN
YQNYVDSSLWENGINAAMLAYNVNAYHSEIPDRKNDSVYAAFNGGINLGAWRLRATGNYNWMTNVGSDYDFQNRYLQRDL
ASLRSQLIVGESYTTGETFDAVSIRGIRLYSDSRMLPPALASFAPIIHGVANTNAKVTITQGGYKIYETTVPPGAFVIDD
LSPSGYGSDLIITIEESDGIKRTFSQPFSSVIQMQRPGVGRWDISAGQVLKDDIQNEPNLFQASYYYGLNNYLTGYTGIQ
ITDNNYTAGLLGLGLNTAYGAFSVDVTHSDVQIPDDKTYRGQSYRISWNKLFEDTRTSLNIAAYRYSTQNYLGLNDALTL
IDEVKHPEQDLEPKNMRNYSRMKNQVTVSINQPLKFEKKDYGSFYLAGSWSDYWADGQNNTNYSIGYSNSASWGSYSISA
QRSWSQDGGNEDSIYLSFSIPIEKLLGSEHRDSGFQSIDTQLNSDFNGSNQLSISSSGYSTENHISYSVNTGYSMMKSSD
DLGYIGGYASYESPWGTLSSSVSASSDNSRQISFNTDGGFVLHSGGLTFSNDSFSDSDTLAVVQAPGAKGARINYGNSTI
DRWGYGVTNALSPYHENRIALDINGLENDVELKSTSAITVPRQGSVVFAGFETVQGQSAIMNIKRTDGKNIPFAADIYDE
NGNIIGNVGQGGQAFVRGIEQQGNIRINWLDDGKPVTCLAHYQQSAAPEKIAQTIILNGISCQIQ

Specific function: Probable porin-like protein necessary for the assembly of a pilin-type protein [H]

COG id: COG3188

COG function: function code NU; P pilus assembly protein, porin PapC

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI1786332, Length=856, Percent_Identity=84.4626168224299, Blast_Score=1521, Evalue=0.0,
Organism=Escherichia coli, GI1790772, Length=887, Percent_Identity=32.2435174746336, Blast_Score=395, Evalue=1e-111,
Organism=Escherichia coli, GI1788427, Length=843, Percent_Identity=31.6725978647687, Blast_Score=388, Evalue=1e-108,
Organism=Escherichia coli, GI1786744, Length=867, Percent_Identity=31.1418685121107, Blast_Score=380, Evalue=1e-106,
Organism=Escherichia coli, GI1787172, Length=864, Percent_Identity=31.712962962963, Blast_Score=364, Evalue=1e-101,
Organism=Escherichia coli, GI1789533, Length=783, Percent_Identity=32.5670498084291, Blast_Score=361, Evalue=1e-100,
Organism=Escherichia coli, GI87081778, Length=870, Percent_Identity=26.7816091954023, Blast_Score=249, Evalue=5e-67,
Organism=Escherichia coli, GI1789610, Length=844, Percent_Identity=24.7630331753554, Blast_Score=142, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 95578; Mature: 95446

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS01151 FIMBRIAL_USHER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRKIIKTHNNKLTYIASFCALLLSPCAISAEHVEYDNTFLMGQDAFNIDLSRYTEGNPT
CCCCEEEECCCCEEHHHHHHHHHHCCCCCCHHHEECCCEEEECCCCEEEEEEEECCCCCC
LPGVYDVSVYINDQPVINQSISFITLEGKKNAQACITLKNLLQFHINKPDINAENSILLQ
CCCEEEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEE
REGELGDCLDLANIIPQASVHYDVNDQRLDINVPQAWVMKNYQNYVDSSLWENGINAAML
ECCCCCHHHHHHHHCCCCEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEE
AYNVNAYHSEIPDRKNDSVYAAFNGGINLGAWRLRATGNYNWMTNVGSDYDFQNRYLQRD
EEECCHHHHCCCCCCCCCEEEEECCCCEECEEEEEECCCCCEEECCCCCCCHHHHHHHHH
LASLRSQLIVGESYTTGETFDAVSIRGIRLYSDSRMLPPALASFAPIIHGVANTNAKVTI
HHHHHHHEEECCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEE
TQGGYKIYETTVPPGAFVIDDLSPSGYGSDLIITIEESDGIKRTFSQPFSSVIQMQRPGV
EECCEEEEEEECCCCEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCC
GRWDISAGQVLKDDIQNEPNLFQASYYYGLNNYLTGYTGIQITDNNYTAGLLGLGLNTAY
CEEECCCCCHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCEEEEEECCCCCCC
GAFSVDVTHSDVQIPDDKTYRGQSYRISWNKLFEDTRTSLNIAAYRYSTQNYLGLNDALT
CEEEEEEECCCEECCCCCCCCCCEEEEEHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHH
LIDEVKHPEQDLEPKNMRNYSRMKNQVTVSINQPLKFEKKDYGSFYLAGSWSDYWADGQN
HHHHHCCCHHCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEECCCHHHCCCCCC
NTNYSIGYSNSASWGSYSISAQRSWSQDGGNEDSIYLSFSIPIEKLLGSEHRDSGFQSID
CCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCHHHHCCCCCCCCCHHHHH
TQLNSDFNGSNQLSISSSGYSTENHISYSVNTGYSMMKSSDDLGYIGGYASYESPWGTLS
HHHCCCCCCCCEEEEECCCCCCCCEEEEEECCCHHHHCCCCCCCEECCCCCCCCCCCCCC
SSVSASSDNSRQISFNTDGGFVLHSGGLTFSNDSFSDSDTLAVVQAPGAKGARINYGNST
CCCCCCCCCCEEEEEECCCCEEEECCCEEECCCCCCCCCCEEEEECCCCCCCEEECCCCC
IDRWGYGVTNALSPYHENRIALDINGLENDVELKSTSAITVPRQGSVVFAGFETVQGQSA
HHHCCCCCHHCCCCCCCCEEEEEECCCCCCEEEECCCEEEECCCCCEEEEECHHCCCCEE
IMNIKRTDGKNIPFAADIYDENGNIIGNVGQGGQAFVRGIEQQGNIRINWLDDGKPVTCL
EEEEECCCCCCCCEEEEEEECCCCEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCEEEE
AHYQQSAAPEKIAQTIILNGISCQIQ
EECHHCCCHHHHHHHHEECCEEEEEC
>Mature Secondary Structure 
SRKIIKTHNNKLTYIASFCALLLSPCAISAEHVEYDNTFLMGQDAFNIDLSRYTEGNPT
CCCEEEECCCCEEHHHHHHHHHHCCCCCCHHHEECCCEEEECCCCEEEEEEEECCCCCC
LPGVYDVSVYINDQPVINQSISFITLEGKKNAQACITLKNLLQFHINKPDINAENSILLQ
CCCEEEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEE
REGELGDCLDLANIIPQASVHYDVNDQRLDINVPQAWVMKNYQNYVDSSLWENGINAAML
ECCCCCHHHHHHHHCCCCEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEE
AYNVNAYHSEIPDRKNDSVYAAFNGGINLGAWRLRATGNYNWMTNVGSDYDFQNRYLQRD
EEECCHHHHCCCCCCCCCEEEEECCCCEECEEEEEECCCCCEEECCCCCCCHHHHHHHHH
LASLRSQLIVGESYTTGETFDAVSIRGIRLYSDSRMLPPALASFAPIIHGVANTNAKVTI
HHHHHHHEEECCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEE
TQGGYKIYETTVPPGAFVIDDLSPSGYGSDLIITIEESDGIKRTFSQPFSSVIQMQRPGV
EECCEEEEEEECCCCEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCC
GRWDISAGQVLKDDIQNEPNLFQASYYYGLNNYLTGYTGIQITDNNYTAGLLGLGLNTAY
CEEECCCCCHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCEEEEEECCCCCCC
GAFSVDVTHSDVQIPDDKTYRGQSYRISWNKLFEDTRTSLNIAAYRYSTQNYLGLNDALT
CEEEEEEECCCEECCCCCCCCCCEEEEEHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHH
LIDEVKHPEQDLEPKNMRNYSRMKNQVTVSINQPLKFEKKDYGSFYLAGSWSDYWADGQN
HHHHHCCCHHCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEECCCHHHCCCCCC
NTNYSIGYSNSASWGSYSISAQRSWSQDGGNEDSIYLSFSIPIEKLLGSEHRDSGFQSID
CCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCHHHHCCCCCCCCCHHHHH
TQLNSDFNGSNQLSISSSGYSTENHISYSVNTGYSMMKSSDDLGYIGGYASYESPWGTLS
HHHCCCCCCCCEEEEECCCCCCCCEEEEEECCCHHHHCCCCCCCEECCCCCCCCCCCCCC
SSVSASSDNSRQISFNTDGGFVLHSGGLTFSNDSFSDSDTLAVVQAPGAKGARINYGNST
CCCCCCCCCCEEEEEECCCCEEEECCCEEECCCCCCCCCCEEEEECCCCCCCEEECCCCC
IDRWGYGVTNALSPYHENRIALDINGLENDVELKSTSAITVPRQGSVVFAGFETVQGQSA
HHHCCCCCHHCCCCCCCCEEEEEECCCCCCEEEECCCEEEECCCCCEEEEECHHCCCCEE
IMNIKRTDGKNIPFAADIYDENGNIIGNVGQGGQAFVRGIEQQGNIRINWLDDGKPVTCL
EEEEECCCCCCCCEEEEEEECCCCEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCEEEE
AHYQQSAAPEKIAQTIILNGISCQIQ
EECHHCCCHHHHHHHHEECCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8102362; 8202364; 9278503 [H]