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The map label for this gene is yadM [H]

Identifier: 170683790

GI number: 170683790

Start: 162644

End: 163210

Strand: Reverse

Name: yadM [H]

Synonym: EcSMS35_0149

Alternate gene names: 170683790

Gene position: 163210-162644 (Counterclockwise)

Preceding gene: 170679612

Following gene: 170681181

Centisome position: 3.22

GC content: 41.98

Gene sequence:

>567_bases
ATGAGAATAACACTGCATAAATTGGCAATACTGACTGGATTATTTTTATCATCCTCTGTACTTGCAACAGACATTAATGT
TGATTTTACAGCAACCGTAAAAGCATCAACTTGTAACATTACGTTATCAGGCGACAATGTCACCCCTGATGGGAGTGACA
CCTACACATTAACTTTCCCAGGAACTATTGGTCTGGACAAAATTGCAAATAAAACGACTCAAGCACAGGCGAATTTTAAT
CTGGTTGCCAGCGGTTGTACCACAGGCGTCAGCAAAATCAATACCAGGCTCAGTGGGAATGCTTCCGGAACTACTCCCGC
ATTAATTGTTCCACTCTCTTCTGACACTACATCAACAACTAATTATATTGGTATGGGTATAAAAGCACTTGGTGAAGATG
ATTCGACATTCTTAATCCCAAACAGTGCGCCGAGTTTTATTCCATGGGAAATTAGTGATACAGACAAAACTCTTGAACTG
ACCGTTGCACTGCGCGAAACCACGGCTGGCAGTGGTGTTCCTGGCGATTTCCGCGCCCAGGCAACTTTCAATTTCATTTA
TGAATAA

Upstream 100 bases:

>100_bases
GCTCATTACCAGCAGAGCGCAGCACCAGAAAAAATAGCGCAAACTATTATTCTGAATGGAATTAGTTGTCAGATTCAGTA
ACAACAGGGAATTTCACATA

Downstream 100 bases:

>100_bases
CAGGGATGATAATAATGAAATCTAAAACATTATGTTATGGACTGCCCGCTGGTGTTTTTTTTGCGGCATCCCTATTCACC
AGCCAATTGTTTGCAGCTAC

Product: fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MRITLHKLAILTGLFLSSSVLATDINVDFTATVKASTCNITLSGDNVTPDGSDTYTLTFPGTIGLDKIANKTTQAQANFN
LVASGCTTGVSKINTRLSGNASGTTPALIVPLSSDTTSTTNYIGMGIKALGEDDSTFLIPNSAPSFIPWEISDTDKTLEL
TVALRETTAGSGVPGDFRAQATFNFIYE

Sequences:

>Translated_188_residues
MRITLHKLAILTGLFLSSSVLATDINVDFTATVKASTCNITLSGDNVTPDGSDTYTLTFPGTIGLDKIANKTTQAQANFN
LVASGCTTGVSKINTRLSGNASGTTPALIVPLSSDTTSTTNYIGMGIKALGEDDSTFLIPNSAPSFIPWEISDTDKTLEL
TVALRETTAGSGVPGDFRAQATFNFIYE
>Mature_188_residues
MRITLHKLAILTGLFLSSSVLATDINVDFTATVKASTCNITLSGDNVTPDGSDTYTLTFPGTIGLDKIANKTTQAQANFN
LVASGCTTGVSKINTRLSGNASGTTPALIVPLSSDTTSTTNYIGMGIKALGEDDSTFLIPNSAPSFIPWEISDTDKTLEL
TVALRETTAGSGVPGDFRAQATFNFIYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081690, Length=190, Percent_Identity=62.6315789473684, Blast_Score=216, Evalue=1e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19696; Mature: 19696

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRITLHKLAILTGLFLSSSVLATDINVDFTATVKASTCNITLSGDNVTPDGSDTYTLTFP
CEEEHHHHHHHHHHHHCCCEEEEECCCEEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEC
GTIGLDKIANKTTQAQANFNLVASGCTTGVSKINTRLSGNASGTTPALIVPLSSDTTSTT
CCCCHHHHCCCCCCCCCCEEEEECCCCCCHHHHEEEECCCCCCCCCEEEEEECCCCCCCC
NYIGMGIKALGEDDSTFLIPNSAPSFIPWEISDTDKTLELTVALRETTAGSGVPGDFRAQ
EEEECCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCCCCEEEE
ATFNFIYE
EEEEEEEC
>Mature Secondary Structure
MRITLHKLAILTGLFLSSSVLATDINVDFTATVKASTCNITLSGDNVTPDGSDTYTLTFP
CEEEHHHHHHHHHHHHCCCEEEEECCCEEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEC
GTIGLDKIANKTTQAQANFNLVASGCTTGVSKINTRLSGNASGTTPALIVPLSSDTTSTT
CCCCHHHHCCCCCCCCCCEEEEECCCCCCHHHHEEEECCCCCCCCCEEEEEECCCCCCCC
NYIGMGIKALGEDDSTFLIPNSAPSFIPWEISDTDKTLELTVALRETTAGSGVPGDFRAQ
EEEECCEEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCCCCEEEE
ATFNFIYE
EEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]