Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170079209

Identifier: 170079209

GI number: 170079209

Start: 2744836

End: 2745918

Strand: Direct

Name: 170079209

Synonym: SYNPCC7002_A2615

Alternate gene names: NA

Gene position: 2744836-2745918 (Clockwise)

Preceding gene: 170079208

Following gene: 170079210

Centisome position: 91.25

GC content: 47.18

Gene sequence:

>1083_bases
ATGAAAAATTATTTAAGGCTGACTTTTCTCAAACTAATAACCTTAGGATTGTGCTGTATTTCTCCTATGCAGTCTAGTCT
TGCCCACAGTCCGACTAATTTGCAAAATGACCCGGCCTCTGCCAAAACATCTGGGCTTGAATTTCTCGTCGGCGAGTCAG
ATCTAATCATTTTCGGCGAAGTTATTGACATTCAATATCGCAACTCCCAACCCACACGGGAACAACCCCAAGGATTACCC
CATACTTTTGTAACTTACAAAATTCGTGAAACCTTACGGGGCAGAACGCCAGGGGAAACGATTACCTTGCGAGTGCCCGG
TGGCGCCGATGGCAGTGGTGGCATCTACATGGAGACGACTGCACCGATATTTGCTCGCAACCAGGCAGATATTTTATTTC
TAACCGGAGACGCCGTAATGGGATGTCCCTTGGTAAATTGCGTTGATGGCCGCTTTAGGGTCGTAGACAATCGTGTGTTT
AATGGTTGGGGAATTCCCGTAGTTGAAGCGACAGAAAGACTAAGGATTGGGGGGAAACCCCGTTTTGATCTCAATGTGAT
CGAATTACCAAGGCCTTCTTTTGAGCTGTTATTGAAACAACCAGAAACCCAAAGAATTATTCAGCAAGAAAGCCAGAGAA
CGGGTCAAAGCATTGCCGAGCTACAACGACGCTACGAAACAGAAGCACCTGCTGCTTATCGGGTGGGTTATGGTTTTCAG
GCGGCAGTGACAGCTGGTGATAATTTCGATTCTCCTGAAGCAGTTCCCATAGAAACCTTTGGACCGCCCCTCAGTTTGTC
TGCGTTTTTTGAAGCTGTACGCCAGTGGAACAACCGGGTACAACCCCCCCAGTCTTCAATCCCATCGGCTGATCCGAACA
AACCATTCAATGTGGCGGATCCAAGGTTAGAAGAAGTCAGAGCTGTCACAGTTCCGGATCAGATTACCGAAGAAGAAAAG
AATGATGTTCAGGCCCAGGAAGGAGAAGGACAAATTCGTGATCTTTCGCCTAATTTGAGAGACCTTTCACCGCAACCCAT
TTCACCTGAGCTAAGACCCGACTTAAGACGGATAAACCCCTAA

Upstream 100 bases:

>100_bases
GAAAATTTTAATGTATTAAATCCAAGTAAGCAATGACTTTTTGATTGATTTCAAAATCTGATTCTACGCCATTAAATTTA
TTGGAGGTCTGTTGAAATAC

Downstream 100 bases:

>100_bases
TTTAACCAGAATCACAACCAATTATTACAGGGACTTTTGCTATGAAGTTCAACTTGTTTAATCCCTATCTACTTGCGGCC
TCAGCCATTATCTCTGCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MKNYLRLTFLKLITLGLCCISPMQSSLAHSPTNLQNDPASAKTSGLEFLVGESDLIIFGEVIDIQYRNSQPTREQPQGLP
HTFVTYKIRETLRGRTPGETITLRVPGGADGSGGIYMETTAPIFARNQADILFLTGDAVMGCPLVNCVDGRFRVVDNRVF
NGWGIPVVEATERLRIGGKPRFDLNVIELPRPSFELLLKQPETQRIIQQESQRTGQSIAELQRRYETEAPAAYRVGYGFQ
AAVTAGDNFDSPEAVPIETFGPPLSLSAFFEAVRQWNNRVQPPQSSIPSADPNKPFNVADPRLEEVRAVTVPDQITEEEK
NDVQAQEGEGQIRDLSPNLRDLSPQPISPELRPDLRRINP

Sequences:

>Translated_360_residues
MKNYLRLTFLKLITLGLCCISPMQSSLAHSPTNLQNDPASAKTSGLEFLVGESDLIIFGEVIDIQYRNSQPTREQPQGLP
HTFVTYKIRETLRGRTPGETITLRVPGGADGSGGIYMETTAPIFARNQADILFLTGDAVMGCPLVNCVDGRFRVVDNRVF
NGWGIPVVEATERLRIGGKPRFDLNVIELPRPSFELLLKQPETQRIIQQESQRTGQSIAELQRRYETEAPAAYRVGYGFQ
AAVTAGDNFDSPEAVPIETFGPPLSLSAFFEAVRQWNNRVQPPQSSIPSADPNKPFNVADPRLEEVRAVTVPDQITEEEK
NDVQAQEGEGQIRDLSPNLRDLSPQPISPELRPDLRRINP
>Mature_360_residues
MKNYLRLTFLKLITLGLCCISPMQSSLAHSPTNLQNDPASAKTSGLEFLVGESDLIIFGEVIDIQYRNSQPTREQPQGLP
HTFVTYKIRETLRGRTPGETITLRVPGGADGSGGIYMETTAPIFARNQADILFLTGDAVMGCPLVNCVDGRFRVVDNRVF
NGWGIPVVEATERLRIGGKPRFDLNVIELPRPSFELLLKQPETQRIIQQESQRTGQSIAELQRRYETEAPAAYRVGYGFQ
AAVTAGDNFDSPEAVPIETFGPPLSLSAFFEAVRQWNNRVQPPQSSIPSADPNKPFNVADPRLEEVRAVTVPDQITEEEK
NDVQAQEGEGQIRDLSPNLRDLSPQPISPELRPDLRRINP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39979; Mature: 39979

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNYLRLTFLKLITLGLCCISPMQSSLAHSPTNLQNDPASAKTSGLEFLVGESDLIIFGE
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEE
VIDIQYRNSQPTREQPQGLPHTFVTYKIRETLRGRTPGETITLRVPGGADGSGGIYMETT
EEEEEECCCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEC
APIFARNQADILFLTGDAVMGCPLVNCVDGRFRVVDNRVFNGWGIPVVEATERLRIGGKP
CCEEECCCCCEEEEECCCCCCCCCEEECCCEEEEEECEEECCCCCCHHHHHHHHCCCCCC
RFDLNVIELPRPSFELLLKQPETQRIIQQESQRTGQSIAELQRRYETEAPAAYRVGYGFQ
CCCEEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEE
AAVTAGDNFDSPEAVPIETFGPPLSLSAFFEAVRQWNNRVQPPQSSIPSADPNKPFNVAD
EEEECCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PRLEEVRAVTVPDQITEEEKNDVQAQEGEGQIRDLSPNLRDLSPQPISPELRPDLRRINP
CCHHHEEEEECCHHHHHHHHHCCCCCCCCCCEEECCCCHHCCCCCCCCCCCCCHHHCCCC
>Mature Secondary Structure
MKNYLRLTFLKLITLGLCCISPMQSSLAHSPTNLQNDPASAKTSGLEFLVGESDLIIFGE
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEE
VIDIQYRNSQPTREQPQGLPHTFVTYKIRETLRGRTPGETITLRVPGGADGSGGIYMETT
EEEEEECCCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEC
APIFARNQADILFLTGDAVMGCPLVNCVDGRFRVVDNRVFNGWGIPVVEATERLRIGGKP
CCEEECCCCCEEEEECCCCCCCCCEEECCCEEEEEECEEECCCCCCHHHHHHHHCCCCCC
RFDLNVIELPRPSFELLLKQPETQRIIQQESQRTGQSIAELQRRYETEAPAAYRVGYGFQ
CCCEEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEE
AAVTAGDNFDSPEAVPIETFGPPLSLSAFFEAVRQWNNRVQPPQSSIPSADPNKPFNVAD
EEEECCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PRLEEVRAVTVPDQITEEEKNDVQAQEGEGQIRDLSPNLRDLSPQPISPELRPDLRRINP
CCHHHEEEEECCHHHHHHHHHCCCCCCCCCCEEECCCCHHCCCCCCCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA