| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079210
Identifier: 170079210
GI number: 170079210
Start: 2745960
End: 2747081
Strand: Direct
Name: 170079210
Synonym: SYNPCC7002_A2616
Alternate gene names: NA
Gene position: 2745960-2747081 (Clockwise)
Preceding gene: 170079209
Following gene: 170079212
Centisome position: 91.29
GC content: 47.77
Gene sequence:
>1122_bases ATGAAGTTCAACTTGTTTAATCCCTATCTACTTGCGGCCTCAGCCATTATCTCTGCTTGTTTTATCCTGCCAAAACCCAC CCAGGCAGCTTCCTGGCTAGAGTGTAATGGTGATAGCGGTAAGAAATTACGGTGGAGTGGCAATTCGACAACAGCCCGTA TCAATACCATTAGTTTTCCGCCCGGTAGTTTACTGCAATCGGTGGAGCGGGGCATTAACGCGACCAATACCAACCCCTCT CCCTTTGTGATCAACACAACGACGGAAACAGGGGGGGTTGGTAGCGGCAATGGCCAAAATGAGATTTACGCAAATAGTAT TTCACCGCCTGGGGTTGCCCAGATGCGGTACCACTGCTACTGGTTATTTGGTTGGCACTATGGTTTAGATGAAGTGGATA TTGTCCTTGATTCATCGGGCCGTTCTTGGACGACTTCCCAGAGTAAGAGCTCTAATACGGTCTATACAGGGTCTCGTTTA CCGATCGACGCAGTGATTAACCACGAAGCTGGGCATTACCTTGGCTTGATGCACGTCAACTGGGAATACAACGTAATGGG GGACTCTTGGCGACATCACCATACCAATGGTTCTACGGCACGCACTTATTTTGGGGAAGATGCTTCCCATGGTTCCCGTG TACTTTATGGCAGTCAAAATTCTACATTTAATGATGTTTCTGCGTCCCACTGGCGCAGAACGGGTGCGAGTGGTGAGTAT TCAAGTCATGGGAGGGTACGGATTCGCAATGCGGCGAATACAGCTACCTTAAGTGGGATTACGATTGCGGGGGAGCCGGG CTATCGCGTCAACCGTGGCAGTACAGTTCGTCCTGAATTTACGATTGAGAATAATGGTAAGCAGACCCATAATAATGTTT CCTATGGGATCTACATTTCAAGCAATGACTATATCAGTTATAGTGATACCCGCATTGGCGGTGGGTTATTTGGGTCGATC CATCCGGCGGACGTTTATACGACGACAATTCCAGTTACGATTCCGAATAATCTGAATCCTGGTCAAAATTACTGGCTTGG GATCATTGTGGATGAGAACAACACCATCTCTGAGGTCAGTGGTTCTAATAACCGAGCTTACATTCCAATTCGCGTGGACT AA
Upstream 100 bases:
>100_bases TTTCACCGCAACCCATTTCACCTGAGCTAAGACCCGACTTAAGACGGATAAACCCCTAATTTAACCAGAATCACAACCAA TTATTACAGGGACTTTTGCT
Downstream 100 bases:
>100_bases ACAAGCGTTATTGACCTTCTTCTAGGCGTCGTTCCCAATCTTTGGCGAGGTCATCACGCCCTTGCAGTTGTTGATCCAGG AGGTCTTGGTCGGTGCCATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MKFNLFNPYLLAASAIISACFILPKPTQAASWLECNGDSGKKLRWSGNSTTARINTISFPPGSLLQSVERGINATNTNPS PFVINTTTETGGVGSGNGQNEIYANSISPPGVAQMRYHCYWLFGWHYGLDEVDIVLDSSGRSWTTSQSKSSNTVYTGSRL PIDAVINHEAGHYLGLMHVNWEYNVMGDSWRHHHTNGSTARTYFGEDASHGSRVLYGSQNSTFNDVSASHWRRTGASGEY SSHGRVRIRNAANTATLSGITIAGEPGYRVNRGSTVRPEFTIENNGKQTHNNVSYGIYISSNDYISYSDTRIGGGLFGSI HPADVYTTTIPVTIPNNLNPGQNYWLGIIVDENNTISEVSGSNNRAYIPIRVD
Sequences:
>Translated_373_residues MKFNLFNPYLLAASAIISACFILPKPTQAASWLECNGDSGKKLRWSGNSTTARINTISFPPGSLLQSVERGINATNTNPS PFVINTTTETGGVGSGNGQNEIYANSISPPGVAQMRYHCYWLFGWHYGLDEVDIVLDSSGRSWTTSQSKSSNTVYTGSRL PIDAVINHEAGHYLGLMHVNWEYNVMGDSWRHHHTNGSTARTYFGEDASHGSRVLYGSQNSTFNDVSASHWRRTGASGEY SSHGRVRIRNAANTATLSGITIAGEPGYRVNRGSTVRPEFTIENNGKQTHNNVSYGIYISSNDYISYSDTRIGGGLFGSI HPADVYTTTIPVTIPNNLNPGQNYWLGIIVDENNTISEVSGSNNRAYIPIRVD >Mature_373_residues MKFNLFNPYLLAASAIISACFILPKPTQAASWLECNGDSGKKLRWSGNSTTARINTISFPPGSLLQSVERGINATNTNPS PFVINTTTETGGVGSGNGQNEIYANSISPPGVAQMRYHCYWLFGWHYGLDEVDIVLDSSGRSWTTSQSKSSNTVYTGSRL PIDAVINHEAGHYLGLMHVNWEYNVMGDSWRHHHTNGSTARTYFGEDASHGSRVLYGSQNSTFNDVSASHWRRTGASGEY SSHGRVRIRNAANTATLSGITIAGEPGYRVNRGSTVRPEFTIENNGKQTHNNVSYGIYISSNDYISYSDTRIGGGLFGSI HPADVYTTTIPVTIPNNLNPGQNYWLGIIVDENNTISEVSGSNNRAYIPIRVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40760; Mature: 40760
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFNLFNPYLLAASAIISACFILPKPTQAASWLECNGDSGKKLRWSGNSTTARINTISFP CEECCCCHHHHHHHHHHHHEEECCCCCCCCCEEEECCCCCCEEEECCCCCEEEEEEEECC PGSLLQSVERGINATNTNPSPFVINTTTETGGVGSGNGQNEIYANSISPPGVAQMRYHCY CHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEE WLFGWHYGLDEVDIVLDSSGRSWTTSQSKSSNTVYTGSRLPIDAVINHEAGHYLGLMHVN EEEEEECCCCEEEEEEECCCCEEECCCCCCCCEEEECCCCCEEEEEECCCCCEEEEEEEE WEYNVMGDSWRHHHTNGSTARTYFGEDASHGSRVLYGSQNSTFNDVSASHWRRTGASGEY EEEEECCCCCEEECCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCC SSHGRVRIRNAANTATLSGITIAGEPGYRVNRGSTVRPEFTIENNGKQTHNNVSYGIYIS CCCCCEEEECCCCEEEEEEEEEECCCCCEECCCCEECCEEEECCCCCCCCCCEEEEEEEC SNDYISYSDTRIGGGLFGSIHPADVYTTTIPVTIPNNLNPGQNYWLGIIVDENNTISEVS CCCEEEECCCEECCEEECCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEECCCCCEEECC GSNNRAYIPIRVD CCCCEEEEEEEEC >Mature Secondary Structure MKFNLFNPYLLAASAIISACFILPKPTQAASWLECNGDSGKKLRWSGNSTTARINTISFP CEECCCCHHHHHHHHHHHHEEECCCCCCCCCEEEECCCCCCEEEECCCCCEEEEEEEECC PGSLLQSVERGINATNTNPSPFVINTTTETGGVGSGNGQNEIYANSISPPGVAQMRYHCY CHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEE WLFGWHYGLDEVDIVLDSSGRSWTTSQSKSSNTVYTGSRLPIDAVINHEAGHYLGLMHVN EEEEEECCCCEEEEEEECCCCEEECCCCCCCCEEEECCCCCEEEEEECCCCCEEEEEEEE WEYNVMGDSWRHHHTNGSTARTYFGEDASHGSRVLYGSQNSTFNDVSASHWRRTGASGEY EEEEECCCCCEEECCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCC SSHGRVRIRNAANTATLSGITIAGEPGYRVNRGSTVRPEFTIENNGKQTHNNVSYGIYIS CCCCCEEEECCCCEEEEEEEEEECCCCCEECCCCEECCEEEECCCCCCCCCCEEEEEEEC SNDYISYSDTRIGGGLFGSIHPADVYTTTIPVTIPNNLNPGQNYWLGIIVDENNTISEVS CCCEEEECCCEECCEEECCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEECCCCCEEECC GSNNRAYIPIRVD CCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA