| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079138
Identifier: 170079138
GI number: 170079138
Start: 2650090
End: 2650479
Strand: Direct
Name: 170079138
Synonym: SYNPCC7002_A2544
Alternate gene names: NA
Gene position: 2650090-2650479 (Clockwise)
Preceding gene: 170079137
Following gene: 170079141
Centisome position: 88.1
GC content: 42.56
Gene sequence:
>390_bases ATGGAAGAATATTATTACTATTACATTCCCCAGCCGCCGTTTTTGTTGGTAGGCCTTGGCTTGTTTATTGCCCTAACTAG CGGCTTTGCGTTCCAGAGTACCCTGAAGCTCAAAGCACGGGGGATTGTTGCCAATAACGACGATATTCACAAACAGTTAT CCACCATTGATTTACAACTGCCTCTCTTTGGCATTGGTATGGGCATGAGTATTTTTCTCGCCAGTGGTTTAGAAGTCTTT TTTATCCCCGCTTGGTTTGCCTACAGCTTGTCTTTACCTTTAACTATCGGCACTGTGGGTCTTTTATGGAAACAATTGGA GCGAGTCTTTGCCATTCTCCGGGAAGGTGGATCAAAAGCCTTAGAAGTTGATTCTTTCAATATTTTTTAA
Upstream 100 bases:
>100_bases TCCGCCAATTTTCCGGTGAGCGTTTAACGGCTGTTTTGCCGAGTTTCGCCCAATCTCGGTCATAATGAAGGCTAGTTAAT AAAGTTTTGTTAAAAAATCC
Downstream 100 bases:
>100_bases GGCCAATTTAGCCGCCCAACACAACCGAATTATCGCGCAATCGCCTCCTTTAGTCCGGGAAAAAATGCACCAGGTTAAAT CCTGAGGCCCGTCCCAGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MEEYYYYYIPQPPFLLVGLGLFIALTSGFAFQSTLKLKARGIVANNDDIHKQLSTIDLQLPLFGIGMGMSIFLASGLEVF FIPAWFAYSLSLPLTIGTVGLLWKQLERVFAILREGGSKALEVDSFNIF
Sequences:
>Translated_129_residues MEEYYYYYIPQPPFLLVGLGLFIALTSGFAFQSTLKLKARGIVANNDDIHKQLSTIDLQLPLFGIGMGMSIFLASGLEVF FIPAWFAYSLSLPLTIGTVGLLWKQLERVFAILREGGSKALEVDSFNIF >Mature_129_residues MEEYYYYYIPQPPFLLVGLGLFIALTSGFAFQSTLKLKARGIVANNDDIHKQLSTIDLQLPLFGIGMGMSIFLASGLEVF FIPAWFAYSLSLPLTIGTVGLLWKQLERVFAILREGGSKALEVDSFNIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14406; Mature: 14406
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEYYYYYIPQPPFLLVGLGLFIALTSGFAFQSTLKLKARGIVANNDDIHKQLSTIDLQL CCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHEEEEEEEEEEECCHHHHHHHHHEEEEC PLFGIGMGMSIFLASGLEVFFIPAWFAYSLSLPLTIGTVGLLWKQLERVFAILREGGSKA CCEECCCHHHHHHHCCCEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE LEVDSFNIF EEECCEECC >Mature Secondary Structure MEEYYYYYIPQPPFLLVGLGLFIALTSGFAFQSTLKLKARGIVANNDDIHKQLSTIDLQL CCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHEEEEEEEEEEECCHHHHHHHHHEEEEC PLFGIGMGMSIFLASGLEVFFIPAWFAYSLSLPLTIGTVGLLWKQLERVFAILREGGSKA CCEECCCHHHHHHHCCCEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE LEVDSFNIF EEECCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA