Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170079035

Identifier: 170079035

GI number: 170079035

Start: 2533646

End: 2534542

Strand: Direct

Name: 170079035

Synonym: SYNPCC7002_A2440

Alternate gene names: NA

Gene position: 2533646-2534542 (Clockwise)

Preceding gene: 170079034

Following gene: 170079036

Centisome position: 84.23

GC content: 51.73

Gene sequence:

>897_bases
ATGTCTGTCTTTAAAGAAGCCTGTGCCTATCTGGGTATGTCCTCTCTCCTGATTGTCCAAGGGGCGATCGCCCCGGCCCA
AGCCCAACAAAACTATCCTCTGACCTGTCGAGGTGGCGGGAATTTAAGCATTACCAATACCAGCGGTAACAATGTAAAAA
TTGTCTTCCGGCCAGCAACGGGCAGTGCTCCCCAAGGCCTGCAACCAGGGGAATGTAGTTGGCAAGATCGTGCCTTTCGC
TCCGGAGAACCCAATGTGATTTGTGATACTGGTGTCCGTGCTGCCCAGTATCTCCCCAAGCTCATGCAAAGTAGCGAATC
TACGACACTCCGAGTGTTTAACGATAATACTCAAGGCTGTATGCAAGTCGTTGGCTTAGGCGCGGCTCCGGTACCCCCTA
CCACCAGCAACACTAATGATCGACCCCGTAATCCTGGCACGCCAAACACAAACCCAGCGACGCAGAATAGGAATAACAAT
AACAACTCGTCTAACACCGGAAATCCTGGGAATACTGGGAATGCTGGGAATACCGGAAATGGCCCAGTTACCGGCGGAAA
TCCTTCTGGTTCTGGGCAATTCCGGCCTGCTTTAAGGGGAATTTGGGATACTACTTACAGCTATACCGATGGGGAACTGC
AGGGCTATATCGATTGGGGATTGTCGACGGTTGGGGGGCCGGATGGCACTGATTTCATGACTATCACCACAGAGGGTTGG
GACGCAAATCAAAATGCCTATGTAATCAAAGGAACTGTTCAACTAGGACTCCTGGGTGCCCCTTTGGGTGGCCCTGTGAG
AGATTTTGAGATGACCTTTACGACGCCTTGTCAGTTTGAAGGGGTCTATGGCAACTCCCTAAACCGACCAATACCCTGGT
CTGGCACTTGCCCCTGA

Upstream 100 bases:

>100_bases
CAGGGGGAATTGAAATAGGCTTCAAGCTTCTCCTCTGCATCGCTTTTTGTTTTTTTTGTCCATGTCATTATCTTGAGCAT
TATTTTGGAGACTGAAATCA

Downstream 100 bases:

>100_bases
TCACGAGATTTTTTGACGGTGCAGAGAAATTTCCTTTAGGATAAAACCAGTTTTTCTGCACTGTATCTAGGTTGCGCCAT
GGTAGGCCGAAAGCTTGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MSVFKEACAYLGMSSLLIVQGAIAPAQAQQNYPLTCRGGGNLSITNTSGNNVKIVFRPATGSAPQGLQPGECSWQDRAFR
SGEPNVICDTGVRAAQYLPKLMQSSESTTLRVFNDNTQGCMQVVGLGAAPVPPTTSNTNDRPRNPGTPNTNPATQNRNNN
NNSSNTGNPGNTGNAGNTGNGPVTGGNPSGSGQFRPALRGIWDTTYSYTDGELQGYIDWGLSTVGGPDGTDFMTITTEGW
DANQNAYVIKGTVQLGLLGAPLGGPVRDFEMTFTTPCQFEGVYGNSLNRPIPWSGTCP

Sequences:

>Translated_298_residues
MSVFKEACAYLGMSSLLIVQGAIAPAQAQQNYPLTCRGGGNLSITNTSGNNVKIVFRPATGSAPQGLQPGECSWQDRAFR
SGEPNVICDTGVRAAQYLPKLMQSSESTTLRVFNDNTQGCMQVVGLGAAPVPPTTSNTNDRPRNPGTPNTNPATQNRNNN
NNSSNTGNPGNTGNAGNTGNGPVTGGNPSGSGQFRPALRGIWDTTYSYTDGELQGYIDWGLSTVGGPDGTDFMTITTEGW
DANQNAYVIKGTVQLGLLGAPLGGPVRDFEMTFTTPCQFEGVYGNSLNRPIPWSGTCP
>Mature_297_residues
SVFKEACAYLGMSSLLIVQGAIAPAQAQQNYPLTCRGGGNLSITNTSGNNVKIVFRPATGSAPQGLQPGECSWQDRAFRS
GEPNVICDTGVRAAQYLPKLMQSSESTTLRVFNDNTQGCMQVVGLGAAPVPPTTSNTNDRPRNPGTPNTNPATQNRNNNN
NSSNTGNPGNTGNAGNTGNGPVTGGNPSGSGQFRPALRGIWDTTYSYTDGELQGYIDWGLSTVGGPDGTDFMTITTEGWD
ANQNAYVIKGTVQLGLLGAPLGGPVRDFEMTFTTPCQFEGVYGNSLNRPIPWSGTCP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31280; Mature: 31149

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVFKEACAYLGMSSLLIVQGAIAPAQAQQNYPLTCRGGGNLSITNTSGNNVKIVFRPAT
CCHHHHHHHHHCHHHEEEEECCCCHHHHCCCCCEEEECCCEEEEEECCCCEEEEEEECCC
GSAPQGLQPGECSWQDRAFRSGEPNVICDTGVRAAQYLPKLMQSSESTTLRVFNDNTQGC
CCCCCCCCCCCCCCHHHHHCCCCCCEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCHHH
MQVVGLGAAPVPPTTSNTNDRPRNPGTPNTNPATQNRNNNNNSSNTGNPGNTGNAGNTGN
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GPVTGGNPSGSGQFRPALRGIWDTTYSYTDGELQGYIDWGLSTVGGPDGTDFMTITTEGW
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCC
DANQNAYVIKGTVQLGLLGAPLGGPVRDFEMTFTTPCQFEGVYGNSLNRPIPWSGTCP
CCCCCCEEEEEEEEEEEEECCCCCCCEEEEEEEECCCEECCEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
SVFKEACAYLGMSSLLIVQGAIAPAQAQQNYPLTCRGGGNLSITNTSGNNVKIVFRPAT
CHHHHHHHHHCHHHEEEEECCCCHHHHCCCCCEEEECCCEEEEEECCCCEEEEEEECCC
GSAPQGLQPGECSWQDRAFRSGEPNVICDTGVRAAQYLPKLMQSSESTTLRVFNDNTQGC
CCCCCCCCCCCCCCHHHHHCCCCCCEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCHHH
MQVVGLGAAPVPPTTSNTNDRPRNPGTPNTNPATQNRNNNNNSSNTGNPGNTGNAGNTGN
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GPVTGGNPSGSGQFRPALRGIWDTTYSYTDGELQGYIDWGLSTVGGPDGTDFMTITTEGW
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCC
DANQNAYVIKGTVQLGLLGAPLGGPVRDFEMTFTTPCQFEGVYGNSLNRPIPWSGTCP
CCCCCCEEEEEEEEEEEEECCCCCCCEEEEEEEECCCEECCEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA