| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079034
Identifier: 170079034
GI number: 170079034
Start: 2532804
End: 2533508
Strand: Direct
Name: 170079034
Synonym: SYNPCC7002_A2439
Alternate gene names: NA
Gene position: 2532804-2533508 (Clockwise)
Preceding gene: 170079033
Following gene: 170079035
Centisome position: 84.2
GC content: 50.78
Gene sequence:
>705_bases ATGGCTTTCTACAAACAAATATCTGCTTTTTGCAGTGCCACTTCTTTGTTGACAATTCCCCTGGCGATCGCCCCGGCCCA AGCCCAACAAAGTTACCCCCTCGTCTGTCGGGGTGGTGGTGGCTTAAGCATCGTCAATACGGGCAACAATAACGTCAGAA TTAATTTCCGGGCCGCTGCTGGTAGTGCTCCCCAAGGTCTGCAACCAGGGGAATGCAGTTGGCAGGATCGCGCCTTTCGC TCCGGAGAGCCGACCGTCATTTGTGATACCAGTGCCCGGGCAGTGCAATATGTCAGCAAACTTGTCCAAAGCAATGAATA TGCAACCCTCCAAGTTTTTAATAACAACCAGGGCTGTATGCAAGCTAATGCACCGATCCTTAACAACCCCCCTGTGCTCA ATGTTCCCCCTGGGATTCCAGCGGCAGTACAATTTCGCCCTAACTTAAACCAGATTTGGCAGTCTAACTATGGCAATATC CACTGGCAAGAAGGTTGGTATCGCAACCAAACCCAGACCATTGCTATCACTTCCCAAGGTTGGGACAGTAATCGTAATGC CTATGTTGTCGAAGGGCGTTGGGGTCGCACAAATAGTAATGATGCCGGGCCATTTGAAATGATATTTAGCTCCGCTTGCG AGTTTTCCGGTAGCTGGAGTCGCCCTAACGGCACAAGTGGCGGCTGGACTGGTTCCTGTCAATAA
Upstream 100 bases:
>100_bases TTACTGCAATGAGTTAGAAAACGAGATATTTGCATCTGTTTAGGGGAACTACAACTAAAGTAATCTCGTCCCTTAGTTAT CCTCCTGGAATCCCTAAACC
Downstream 100 bases:
>100_bases AATGGTTGTGGCCTAATCGCTGCTTGGCTGAAAGATGCAGGGGGAATTGAAATAGGCTTCAAGCTTCTCCTCTGCATCGC TTTTTGTTTTTTTTGTCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MAFYKQISAFCSATSLLTIPLAIAPAQAQQSYPLVCRGGGGLSIVNTGNNNVRINFRAAAGSAPQGLQPGECSWQDRAFR SGEPTVICDTSARAVQYVSKLVQSNEYATLQVFNNNQGCMQANAPILNNPPVLNVPPGIPAAVQFRPNLNQIWQSNYGNI HWQEGWYRNQTQTIAITSQGWDSNRNAYVVEGRWGRTNSNDAGPFEMIFSSACEFSGSWSRPNGTSGGWTGSCQ
Sequences:
>Translated_234_residues MAFYKQISAFCSATSLLTIPLAIAPAQAQQSYPLVCRGGGGLSIVNTGNNNVRINFRAAAGSAPQGLQPGECSWQDRAFR SGEPTVICDTSARAVQYVSKLVQSNEYATLQVFNNNQGCMQANAPILNNPPVLNVPPGIPAAVQFRPNLNQIWQSNYGNI HWQEGWYRNQTQTIAITSQGWDSNRNAYVVEGRWGRTNSNDAGPFEMIFSSACEFSGSWSRPNGTSGGWTGSCQ >Mature_233_residues AFYKQISAFCSATSLLTIPLAIAPAQAQQSYPLVCRGGGGLSIVNTGNNNVRINFRAAAGSAPQGLQPGECSWQDRAFRS GEPTVICDTSARAVQYVSKLVQSNEYATLQVFNNNQGCMQANAPILNNPPVLNVPPGIPAAVQFRPNLNQIWQSNYGNIH WQEGWYRNQTQTIAITSQGWDSNRNAYVVEGRWGRTNSNDAGPFEMIFSSACEFSGSWSRPNGTSGGWTGSCQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25389; Mature: 25258
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFYKQISAFCSATSLLTIPLAIAPAQAQQSYPLVCRGGGGLSIVNTGNNNVRINFRAAA CCHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCEEEECCCCEEEEECCCCEEEEEEEECC GSAPQGLQPGECSWQDRAFRSGEPTVICDTSARAVQYVSKLVQSNEYATLQVFNNNQGCM CCCCCCCCCCCCCCHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEEEECCCCCE QANAPILNNPPVLNVPPGIPAAVQFRPNLNQIWQSNYGNIHWQEGWYRNQTQTIAITSQG EECCCCCCCCCEEECCCCCCEEEEECCCHHHHHHCCCCEEEECCCEECCCCEEEEEEECC WDSNRNAYVVEGRWGRTNSNDAGPFEMIFSSACEFSGSWSRPNGTSGGWTGSCQ CCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AFYKQISAFCSATSLLTIPLAIAPAQAQQSYPLVCRGGGGLSIVNTGNNNVRINFRAAA CHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCEEEECCCCEEEEECCCCEEEEEEEECC GSAPQGLQPGECSWQDRAFRSGEPTVICDTSARAVQYVSKLVQSNEYATLQVFNNNQGCM CCCCCCCCCCCCCCHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEEEECCCCCE QANAPILNNPPVLNVPPGIPAAVQFRPNLNQIWQSNYGNIHWQEGWYRNQTQTIAITSQG EECCCCCCCCCEEECCCCCCEEEEECCCHHHHHHCCCCEEEECCCEECCCCEEEEEEECC WDSNRNAYVVEGRWGRTNSNDAGPFEMIFSSACEFSGSWSRPNGTSGGWTGSCQ CCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA