Click here to switch to the map view.

The map label for this gene is yezE [H]

Identifier: 170079036

GI number: 170079036

Start: 2534621

End: 2535208

Strand: Direct

Name: yezE [H]

Synonym: SYNPCC7002_A2441

Alternate gene names: 170079036

Gene position: 2534621-2535208 (Clockwise)

Preceding gene: 170079035

Following gene: 170079038

Centisome position: 84.26

GC content: 51.02

Gene sequence:

>588_bases
ATGGTAGGCCGAAAGCTTGCTTTTAACCGTAATGCTGCCCTTGAAAAGGCGATGGAATTGTTTTGGGAAAAGGGTTACAG
CGCTACAAGCCTTGCGGAACTTTTGGACTACATGGGGATCCAGCGGCAAAGTCTGTACAACACCTTTGGCAATAAACATG
ATTTGTTCCTGGAGGCGATCGCCTACTACGGCAAAATCGCAGTGCGCCAGCTAGAAGAGCGGCTCAACTATTCCGCTTCC
CCCCTCGAAAATCTCCGAAATTTGTTTTATCAAACCGCCGACAATGCCAAGCTCCTCGGTTGTCGGGGCTGTTTTGTCGT
CAATGCAATGATTGAACTCGCGCCCCACGATCCCCAGGTGGCCGCCCTCGTGGAAGATATTGCCACCAATGTCGAGCAAA
TTTTTACGGGTACCCTCAATCAGGCGATCGCCAAAGGAGAACTGCCCCCCGCTTTTGACAGCCCGAAAACTGCCCGTTAT
CTCTACCATGTCCTTCTAGGATTAAATACCCGCATTAAAGGCTTGCCTAACCCCGAACACCTTAGAGAAACCCTCGATCT
CGCCCTGATGGTGCTGCAACCCCAATAA

Upstream 100 bases:

>100_bases
CTGGTCTGGCACTTGCCCCTGATCACGAGATTTTTTGACGGTGCAGAGAAATTTCCTTTAGGATAAAACCAGTTTTTCTG
CACTGTATCTAGGTTGCGCC

Downstream 100 bases:

>100_bases
AAAAGCCCCCTGGCCGATGAACCAGAGAGCCCATTCTCCCCTGGGGGAGATGTCGAAGACATTGGGGGTTAGTCGCGGCT
ATTGATGGCAATCAACAAGC

Product: transcriptional regulator, TetR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MVGRKLAFNRNAALEKAMELFWEKGYSATSLAELLDYMGIQRQSLYNTFGNKHDLFLEAIAYYGKIAVRQLEERLNYSAS
PLENLRNLFYQTADNAKLLGCRGCFVVNAMIELAPHDPQVAALVEDIATNVEQIFTGTLNQAIAKGELPPAFDSPKTARY
LYHVLLGLNTRIKGLPNPEHLRETLDLALMVLQPQ

Sequences:

>Translated_195_residues
MVGRKLAFNRNAALEKAMELFWEKGYSATSLAELLDYMGIQRQSLYNTFGNKHDLFLEAIAYYGKIAVRQLEERLNYSAS
PLENLRNLFYQTADNAKLLGCRGCFVVNAMIELAPHDPQVAALVEDIATNVEQIFTGTLNQAIAKGELPPAFDSPKTARY
LYHVLLGLNTRIKGLPNPEHLRETLDLALMVLQPQ
>Mature_195_residues
MVGRKLAFNRNAALEKAMELFWEKGYSATSLAELLDYMGIQRQSLYNTFGNKHDLFLEAIAYYGKIAVRQLEERLNYSAS
PLENLRNLFYQTADNAKLLGCRGCFVVNAMIELAPHDPQVAALVEDIATNVEQIFTGTLNQAIAKGELPPAFDSPKTARY
LYHVLLGLNTRIKGLPNPEHLRETLDLALMVLQPQ

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081833, Length=174, Percent_Identity=31.0344827586207, Blast_Score=87, Evalue=9e-19,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 21917; Mature: 21917

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGRKLAFNRNAALEKAMELFWEKGYSATSLAELLDYMGIQRQSLYNTFGNKHDLFLEAI
CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHH
AYYGKIAVRQLEERLNYSASPLENLRNLFYQTADNAKLLGCRGCFVVNAMIELAPHDPQV
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHCCCCCHH
AALVEDIATNVEQIFTGTLNQAIAKGELPPAFDSPKTARYLYHVLLGLNTRIKGLPNPEH
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHH
LRETLDLALMVLQPQ
HHHHHHHHHHHCCCC
>Mature Secondary Structure
MVGRKLAFNRNAALEKAMELFWEKGYSATSLAELLDYMGIQRQSLYNTFGNKHDLFLEAI
CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHH
AYYGKIAVRQLEERLNYSASPLENLRNLFYQTADNAKLLGCRGCFVVNAMIELAPHDPQV
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHCCCCCHH
AALVEDIATNVEQIFTGTLNQAIAKGELPPAFDSPKTARYLYHVLLGLNTRIKGLPNPEH
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHH
LRETLDLALMVLQPQ
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]