Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170078817

Identifier: 170078817

GI number: 170078817

Start: 2307835

End: 2308287

Strand: Reverse

Name: 170078817

Synonym: SYNPCC7002_A2219

Alternate gene names: NA

Gene position: 2308287-2307835 (Counterclockwise)

Preceding gene: 170078819

Following gene: 170078816

Centisome position: 76.74

GC content: 52.98

Gene sequence:

>453_bases
ATGTGTCCCGTCGATTTGGCCCGCACCATCGAGGAGGATGCCCACCAATTTGTTGTGGGTCGGGGCATTTTACAGAATTA
TCGTCTGGCGTTTAATCGTCTTTCTCCTAAACGCAAAAGCTGTGGTGTTTTGGATGTGGTGCCCCACGCAGGCAGTCATG
TGGAAGGCGTTCTCTACCATTTGCCCTGGCGAGTCAGTGAAAAGCTCGATCTGCGGGAGGAAGTCCCCACCAATGGTTAT
CGCCAAACCCAGGTGACTGTTGAATGCCAAGGCCAGCGGTTCCCCTCGGTGCGTACCTACGTCGTCGTCAATAAAACGCC
CCAGGAAGTTCCCCCAGACGATTGGTATTTTTATATTGTGATGCGGGGGGCAATGACCGCTGGCCTTTCCCGCGACTATT
CTTGGCGATTGTTTAACCACATGAAACGTCTCCAACGGGGTCAGACCCTTTAA

Upstream 100 bases:

>100_bases
TGACCCTTCTGCGCCCCCTTTCCAAACCCACACAGCGTCCCAACCCCGCACCATCACCCACACAGACAGGGCTTTCTATT
ATTTCGCCTATGGGTCTTGT

Downstream 100 bases:

>100_bases
AATTTTTGATGCTGTGTGCTTAGGAAGAAGGATTGATATTTTATGGTTGCCCCTAAACAAGAAGAACTCCCCACAACGGC
GATCGCCCGTTCCCCGGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MCPVDLARTIEEDAHQFVVGRGILQNYRLAFNRLSPKRKSCGVLDVVPHAGSHVEGVLYHLPWRVSEKLDLREEVPTNGY
RQTQVTVECQGQRFPSVRTYVVVNKTPQEVPPDDWYFYIVMRGAMTAGLSRDYSWRLFNHMKRLQRGQTL

Sequences:

>Translated_150_residues
MCPVDLARTIEEDAHQFVVGRGILQNYRLAFNRLSPKRKSCGVLDVVPHAGSHVEGVLYHLPWRVSEKLDLREEVPTNGY
RQTQVTVECQGQRFPSVRTYVVVNKTPQEVPPDDWYFYIVMRGAMTAGLSRDYSWRLFNHMKRLQRGQTL
>Mature_150_residues
MCPVDLARTIEEDAHQFVVGRGILQNYRLAFNRLSPKRKSCGVLDVVPHAGSHVEGVLYHLPWRVSEKLDLREEVPTNGY
RQTQVTVECQGQRFPSVRTYVVVNKTPQEVPPDDWYFYIVMRGAMTAGLSRDYSWRLFNHMKRLQRGQTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17405; Mature: 17405

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCPVDLARTIEEDAHQFVVGRGILQNYRLAFNRLSPKRKSCGVLDVVPHAGSHVEGVLYH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCEEEEE
LPWRVSEKLDLREEVPTNGYRQTQVTVECQGQRFPSVRTYVVVNKTPQEVPPDDWYFYIV
CCCCCCCCCCCHHCCCCCCCEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCEEEEEE
MRGAMTAGLSRDYSWRLFNHMKRLQRGQTL
EECHHHHCCCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MCPVDLARTIEEDAHQFVVGRGILQNYRLAFNRLSPKRKSCGVLDVVPHAGSHVEGVLYH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCEEEEE
LPWRVSEKLDLREEVPTNGYRQTQVTVECQGQRFPSVRTYVVVNKTPQEVPPDDWYFYIV
CCCCCCCCCCCHHCCCCCCCEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCEEEEEE
MRGAMTAGLSRDYSWRLFNHMKRLQRGQTL
EECHHHHCCCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA