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The map label for this gene is ybgC [C]

Identifier: 170078816

GI number: 170078816

Start: 2307304

End: 2307792

Strand: Reverse

Name: ybgC [C]

Synonym: SYNPCC7002_A2218

Alternate gene names: 170078816

Gene position: 2307792-2307304 (Counterclockwise)

Preceding gene: 170078817

Following gene: 170078815

Centisome position: 76.72

GC content: 51.74

Gene sequence:

>489_bases
ATGGTTGCCCCTAAACAAGAAGAACTCCCCACAACGGCGATCGCCCGTTCCCCGGCCTTACATGCCACCAGTGAACCCTG
GTTTGACTATCCAATTACGGTTTATCCCCATCACACCGATTATGCTGGCGTCGTTTGGCACGGCACTTACATTAAATGGC
TAGAGGAAGCCCGGATCGCCTGTCTCCAATCCATTGGCCTTGACTACGCCGATCTGGTTCAACTGGGTTGCGAATTACCC
GTGATCGCCCTATCAACCCGCTACCATAGTTTTCTGAAGATGGGGATGACCGCGATTATCAAAACCCGCATGCAAGAAAT
GAAAGGCGTCCGCATGGAGTGGGACTACCGCATTGAATCCCCAGACGGGCAAGAACTGTACTTCACCGGTCAAGTGACCC
TGGTTAGCGTTGACCGAGAAAAAGGCAAAATCATGCGCCAATTGCCACCCGCCGTGGAAGAAGTCTTCAAGAAAATTCGT
GGGATTTAA

Upstream 100 bases:

>100_bases
CTATTCTTGGCGATTGTTTAACCACATGAAACGTCTCCAACGGGGTCAGACCCTTTAAAATTTTTGATGCTGTGTGCTTA
GGAAGAAGGATTGATATTTT

Downstream 100 bases:

>100_bases
GGCCATTTCTGCCGATAATAGACAGTCTATGCTGGACTAACAGACAAAATTTTGACGTTTATCGAAAATCACTATGAGTA
ATATTATTCGCGTAGGTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MVAPKQEELPTTAIARSPALHATSEPWFDYPITVYPHHTDYAGVVWHGTYIKWLEEARIACLQSIGLDYADLVQLGCELP
VIALSTRYHSFLKMGMTAIIKTRMQEMKGVRMEWDYRIESPDGQELYFTGQVTLVSVDREKGKIMRQLPPAVEEVFKKIR
GI

Sequences:

>Translated_162_residues
MVAPKQEELPTTAIARSPALHATSEPWFDYPITVYPHHTDYAGVVWHGTYIKWLEEARIACLQSIGLDYADLVQLGCELP
VIALSTRYHSFLKMGMTAIIKTRMQEMKGVRMEWDYRIESPDGQELYFTGQVTLVSVDREKGKIMRQLPPAVEEVFKKIR
GI
>Mature_162_residues
MVAPKQEELPTTAIARSPALHATSEPWFDYPITVYPHHTDYAGVVWHGTYIKWLEEARIACLQSIGLDYADLVQLGCELP
VIALSTRYHSFLKMGMTAIIKTRMQEMKGVRMEWDYRIESPDGQELYFTGQVTLVSVDREKGKIMRQLPPAVEEVFKKIR
GI

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 18543; Mature: 18543

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAPKQEELPTTAIARSPALHATSEPWFDYPITVYPHHTDYAGVVWHGTYIKWLEEARIA
CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEECHHHHHHHHHHHH
CLQSIGLDYADLVQLGCELPVIALSTRYHSFLKMGMTAIIKTRMQEMKGVRMEWDYRIES
HHHHHCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC
PDGQELYFTGQVTLVSVDREKGKIMRQLPPAVEEVFKKIRGI
CCCCEEEEECCEEEEEECCHHHHHHHHCCHHHHHHHHHHCCC
>Mature Secondary Structure
MVAPKQEELPTTAIARSPALHATSEPWFDYPITVYPHHTDYAGVVWHGTYIKWLEEARIA
CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEECHHHHHHHHHHHH
CLQSIGLDYADLVQLGCELPVIALSTRYHSFLKMGMTAIIKTRMQEMKGVRMEWDYRIES
HHHHHCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC
PDGQELYFTGQVTLVSVDREKGKIMRQLPPAVEEVFKKIRGI
CCCCEEEEECCEEEEEECCHHHHHHHHCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]