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The map label for this gene is ycfF [C]

Identifier: 170078819

GI number: 170078819

Start: 2308445

End: 2308786

Strand: Reverse

Name: ycfF [C]

Synonym: SYNPCC7002_A2221

Alternate gene names: 170078819

Gene position: 2308786-2308445 (Counterclockwise)

Preceding gene: 170078825

Following gene: 170078817

Centisome position: 76.75

GC content: 50.0

Gene sequence:

>342_bases
ATGAGCGATACGATTTTTGGCAAAATTATTCGGCGAGAGATTCCGGCGGATATTGTCTATGAGGACGATCTAGCCCTGGC
TTTCCGTGATGTCAACCCCCAAGCCCCTGTGCATATCTTGGTGATTCCCAAAAAGCCAATTCCCATGCTGACAGCGGCCG
ATGATACAGATCAAGCGCTTTTGGGTCATTTATTATTGACCGTTAAAAAGATTGCCCGCCAGGAAAACCTCGATAAAGGC
TACCGTGTCGTGATTAATACCGGTGAAGATGGGGGCCAAACGGTGTTCCATCTCCATCTGCATCTCCTCGGAGATCGCCC
CCTAGCTTGGCCTCCTGGCTAA

Upstream 100 bases:

>100_bases
GCGGTAGCGGGGATTTGCTTCACTGAACTTAATACTCAAGCGCCCCAGGCGAGCAACCCGATAAAATAACTCCCCAGAGA
CTTTCACAAGGCGATAGCCT

Downstream 100 bases:

>100_bases
ATCCTTGTAGCGTAAACCCCAGGCTTTTATTCCCTTGAGGTAGCGGCCCATGTCCTTTGACCCTTCTGCGCCCCCTTTCC
AAACCCACACAGCGTCCCAA

Product: histidine triad protein

Products: NA

Alternate protein names: ORF 1 [H]

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MSDTIFGKIIRREIPADIVYEDDLALAFRDVNPQAPVHILVIPKKPIPMLTAADDTDQALLGHLLLTVKKIARQENLDKG
YRVVINTGEDGGQTVFHLHLHLLGDRPLAWPPG

Sequences:

>Translated_113_residues
MSDTIFGKIIRREIPADIVYEDDLALAFRDVNPQAPVHILVIPKKPIPMLTAADDTDQALLGHLLLTVKKIARQENLDKG
YRVVINTGEDGGQTVFHLHLHLLGDRPLAWPPG
>Mature_112_residues
SDTIFGKIIRREIPADIVYEDDLALAFRDVNPQAPVHILVIPKKPIPMLTAADDTDQALLGHLLLTVKKIARQENLDKGY
RVVINTGEDGGQTVFHLHLHLLGDRPLAWPPG

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI4885413, Length=112, Percent_Identity=60.7142857142857, Blast_Score=154, Evalue=2e-38,
Organism=Homo sapiens, GI14211923, Length=110, Percent_Identity=60.9090909090909, Blast_Score=147, Evalue=2e-36,
Organism=Escherichia coli, GI1787346, Length=109, Percent_Identity=53.2110091743119, Blast_Score=111, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17506713, Length=112, Percent_Identity=63.3928571428571, Blast_Score=157, Evalue=1e-39,
Organism=Drosophila melanogaster, GI28574010, Length=111, Percent_Identity=59.4594594594595, Blast_Score=149, Evalue=5e-37,
Organism=Drosophila melanogaster, GI24581222, Length=112, Percent_Identity=58.9285714285714, Blast_Score=147, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 12550; Mature: 12419

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTIFGKIIRREIPADIVYEDDLALAFRDVNPQAPVHILVIPKKPIPMLTAADDTDQAL
CCCHHHHHHHHHHCCCCEEEECCEEEEEECCCCCCCEEEEEECCCCCCEEEECCCCHHHH
LGHLLLTVKKIARQENLDKGYRVVINTGEDGGQTVFHLHLHLLGDRPLAWPPG
HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
SDTIFGKIIRREIPADIVYEDDLALAFRDVNPQAPVHILVIPKKPIPMLTAADDTDQAL
CCHHHHHHHHHHCCCCEEEECCEEEEEECCCCCCCEEEEEECCCCCCEEEECCCCHHHH
LGHLLLTVKKIARQENLDKGYRVVINTGEDGGQTVFHLHLHLLGDRPLAWPPG
HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2108129; 1472710 [H]