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The map label for this gene is cpcE

Identifier: 170078811

GI number: 170078811

Start: 2303268

End: 2304074

Strand: Direct

Name: cpcE

Synonym: SYNPCC7002_A2213

Alternate gene names: 170078811

Gene position: 2303268-2304074 (Clockwise)

Preceding gene: 170078810

Following gene: 170078812

Centisome position: 76.57

GC content: 52.29

Gene sequence:

>807_bases
ATGTCGGACTGGCAGATGGCTGAGGCCTGGACCCTAGAGGAGGCGATCGCCAATATCCAACAAACGGAAGATACAGGTAA
ACGCTATTATGCGGCTTGGTGGTTTGGCAAGTTCCGGGTGCAGGATGAGCGGGCCGTAAATGCGTTGCTAGCAGCGTTAA
AAGATGAGACGGATCGGTCGCCGGATGGAGGTTATCCTCTACGTCGAAACGCAGCAAAGGCGTTGGGCAAGCTGGGCAAT
CTGGCAGCGGTGCAACCGTTAATTGAGAGTTTAGAAAGTCCTGATTATTATGTGCGGGAGTCGGCGGCCCAATCGTTGGA
GATGTTGGGAGATCGGCAGGCAATTCCTGCGTTACAAGCGCTACTTGCAGGAGGGGTTGCAGCGGCAGTCAAGGCTGAGG
GCAAACCCCATTTAGTGCAGCCCTATGAAGCGGTGATTGAGGCGTTAGGGACGATTGGTGCCACGGCGGCGATCGCCGAG
ATTGAGCCATTTTTAGATCATGAATTCGCAAAAATTCGCTACGCAGCACTACGGGCCTTATATCAACTGACCCAAGAAGC
CCATTACGCTGAACAGTTAATGGAAGCCTTGAATGGTAACCAGCTACAGTTACGACGGTCTGCGCTGTTAGATTTGGGTG
CTATCGGCTATGTTCCGGCGGGTCAGGCGATCGCCAAAGCCTATGCCGAAAATAGCTTAAAGTTAATTTCCCTCAAGGGC
ATTCTCGAATCCCATTTACAACGGACCGCCGAAACCCTCGATGCGGACGGTTTACAATTGCTCGAATTAATGGATAGTCT
GCTCTAG

Upstream 100 bases:

>100_bases
AACATTGTTGTTTTGAATATTTTTTCTAGACGGGGTAGCAGTGCTTTGGTTTTAGTGCTGTTGCTCCGACTTGTTGTGGG
GGCTATTTAAAGGAGAATTT

Downstream 100 bases:

>100_bases
GAACCTCATAAACCAAATCCCTACATTTTTTGCGATCGCTAATTTCTGAACCCATGACCGTCGACGTTTTAATTCGTGCC
GTTAACAACCCCACTTCAGC

Product: phycocyanin alpha subunit phycocyanobilin lyase, CpcE

Products: NA

Alternate protein names: Phycocyanin operon protein CpcE

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MSDWQMAEAWTLEEAIANIQQTEDTGKRYYAAWWFGKFRVQDERAVNALLAALKDETDRSPDGGYPLRRNAAKALGKLGN
LAAVQPLIESLESPDYYVRESAAQSLEMLGDRQAIPALQALLAGGVAAAVKAEGKPHLVQPYEAVIEALGTIGATAAIAE
IEPFLDHEFAKIRYAALRALYQLTQEAHYAEQLMEALNGNQLQLRRSALLDLGAIGYVPAGQAIAKAYAENSLKLISLKG
ILESHLQRTAETLDADGLQLLELMDSLL

Sequences:

>Translated_268_residues
MSDWQMAEAWTLEEAIANIQQTEDTGKRYYAAWWFGKFRVQDERAVNALLAALKDETDRSPDGGYPLRRNAAKALGKLGN
LAAVQPLIESLESPDYYVRESAAQSLEMLGDRQAIPALQALLAGGVAAAVKAEGKPHLVQPYEAVIEALGTIGATAAIAE
IEPFLDHEFAKIRYAALRALYQLTQEAHYAEQLMEALNGNQLQLRRSALLDLGAIGYVPAGQAIAKAYAENSLKLISLKG
ILESHLQRTAETLDADGLQLLELMDSLL
>Mature_267_residues
SDWQMAEAWTLEEAIANIQQTEDTGKRYYAAWWFGKFRVQDERAVNALLAALKDETDRSPDGGYPLRRNAAKALGKLGNL
AAVQPLIESLESPDYYVRESAAQSLEMLGDRQAIPALQALLAGGVAAAVKAEGKPHLVQPYEAVIEALGTIGATAAIAEI
EPFLDHEFAKIRYAALRALYQLTQEAHYAEQLMEALNGNQLQLRRSALLDLGAIGYVPAGQAIAKAYAENSLKLISLKGI
LESHLQRTAETLDADGLQLLELMDSLL

Specific function: Required for the chromophorylation of the cpcA gene product

COG id: COG1413

COG function: function code C; FOG: HEAT repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpcE/RpcE/PecE family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CPCE_SYNP2 (P31967)

Other databases:

- EMBL:   M93569
- EMBL:   CP000951
- RefSeq:   YP_001735449.1
- ProteinModelPortal:   P31967
- SMR:   P31967
- GeneID:   6055870
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A2213
- HOGENOM:   HBG554776
- OMA:   AARAMYQ
- ProtClustDB:   CLSK892932
- GO:   GO:0030089
- GO:   GO:0005488
- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR004155
- Gene3D:   G3DSA:1.25.10.10
- SMART:   SM00567

Pfam domain/function: PF03130 HEAT_PBS; SSF48371 ARM-type_fold

EC number: 4.-.-.-

Molecular weight: Translated: 29234; Mature: 29102

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDWQMAEAWTLEEAIANIQQTEDTGKRYYAAWWFGKFRVQDERAVNALLAALKDETDRS
CCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEHEEECHHHHHHHHHHHHHHHCCCC
PDGGYPLRRNAAKALGKLGNLAAVQPLIESLESPDYYVRESAAQSLEMLGDRQAIPALQA
CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
LLAGGVAAAVKAEGKPHLVQPYEAVIEALGTIGATAAIAEIEPFLDHEFAKIRYAALRAL
HHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQLTQEAHYAEQLMEALNGNQLQLRRSALLDLGAIGYVPAGQAIAKAYAENSLKLISLKG
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEHHHH
ILESHLQRTAETLDADGLQLLELMDSLL
HHHHHHHHHHHHHCCCHHHHHHHHHHHC
>Mature Secondary Structure 
SDWQMAEAWTLEEAIANIQQTEDTGKRYYAAWWFGKFRVQDERAVNALLAALKDETDRS
CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEHEEECHHHHHHHHHHHHHHHCCCC
PDGGYPLRRNAAKALGKLGNLAAVQPLIESLESPDYYVRESAAQSLEMLGDRQAIPALQA
CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
LLAGGVAAAVKAEGKPHLVQPYEAVIEALGTIGATAAIAEIEPFLDHEFAKIRYAALRAL
HHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQLTQEAHYAEQLMEALNGNQLQLRRSALLDLGAIGYVPAGQAIAKAYAENSLKLISLKG
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEHHHH
ILESHLQRTAETLDADGLQLLELMDSLL
HHHHHHHHHHHHHCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1644801