Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078716

Identifier: 170078716

GI number: 170078716

Start: 2199058

End: 2200155

Strand: Reverse

Name: 170078716

Synonym: SYNPCC7002_A2117

Alternate gene names: NA

Gene position: 2200155-2199058 (Counterclockwise)

Preceding gene: 170078722

Following gene: 170078714

Centisome position: 73.14

GC content: 38.98

Gene sequence:

>1098_bases
TTGTCTATCTTCACTATGTTACTGAATATTGACAGCAATACCACCCCGATTGAAGCACCAATCCACAGGGAAGAACGAGA
GATAAAAAAGGTTTGGTATCTAGCGGCACCGCAAAATTTAAACCCTAGTTTACGAGAAACATCTACATCCTCTGAAGATG
TAACGGAAGGTTTACAGACTATTCCTGAGACTTCTTCTACAGACAATGAAGAACAACAAACAAAAAATTCAACATCTTTT
TGGGATCCGGAATCAGTCACCATAGATTTTCGCTACTTTACCACCAATTTTGAGCAGGATAATCTTTTAATTCAACCCAG
CATTACTGGTACTTTACCTAATGGCGATCGCCTGAGTTTGACAAGCGGCTTTAATCGATTCCAGCAACCAGAGATTGATT
CGATCCAAAATATTCCTTTACAGTTTGATTGGGAAGGAAAAATTGCTGGTTTAGAGAGTGATATTGGGACTGGAATTGAT
TGGTTTGATCGCGTTACGCCAGCTCTTAGTTTTCGGGCCAATAGCCGTGTGAATATCGGTGAACGAGCCAGTTTGTCTTT
TTTTGTCGAACATGCTCCCTATAAATTTAATGCAAAAACCGTTGAAAATGAAATCACAAATTGGCGTTATGGCCCCAATC
TATTCTGGCAAATTTCTCCAGATACAAGCTTTTTTAGTTTGGTTCGTTGGGGTCGTTACAGTGATGGCAATCATGAACAA
CAATCCTTTAGTCGATTAGAACATACTAGCGGTGAATTTCAGCTAGCAGCGAATCTTTTTAACTGGCGTTATCGCGAAGA
TAAAGAAATAGAAAGTGGCTATTTTTCACCAGAAGATTTTCTTGTTATCAATGGTGAATTGATTTGGAATAAAAATATTT
TTTCCTGGTTGGATTGTAATTTGTCCACATCTGTTGGCCGGCAACGCCTCCAAGGACAATGGGATTTTGTATATGGCTAT
GGTGGTCGCTGTACCACAACAATTGCTGAAGATATTTTCTGGGATCTAGATTATCGTTTTAGTAATGTTTTAGGAGACAA
CAGTAACAGTCGATATAACAGCGAAACATGGAGAATAATATTGCGGGTACAGCTTTGA

Upstream 100 bases:

>100_bases
CCTATGGCTTTCCTTAGACAAGTCACACTCAAATTGAGTCTATATTACATCCAAAAAAACAGTTTATAATCTCTGTTAAG
AAAAATATTTATAAATCATT

Downstream 100 bases:

>100_bases
TTTTTTAACTAATGATTTCTGAGATTTCGAGATACGAAAAAAAAATTCTACTTAATAAATAGAAATAAACGTGAGACGTT
TGTAGTTAATTATTTACATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 365; Mature: 364

Protein sequence:

>365_residues
MSIFTMLLNIDSNTTPIEAPIHREEREIKKVWYLAAPQNLNPSLRETSTSSEDVTEGLQTIPETSSTDNEEQQTKNSTSF
WDPESVTIDFRYFTTNFEQDNLLIQPSITGTLPNGDRLSLTSGFNRFQQPEIDSIQNIPLQFDWEGKIAGLESDIGTGID
WFDRVTPALSFRANSRVNIGERASLSFFVEHAPYKFNAKTVENEITNWRYGPNLFWQISPDTSFFSLVRWGRYSDGNHEQ
QSFSRLEHTSGEFQLAANLFNWRYREDKEIESGYFSPEDFLVINGELIWNKNIFSWLDCNLSTSVGRQRLQGQWDFVYGY
GGRCTTTIAEDIFWDLDYRFSNVLGDNSNSRYNSETWRIILRVQL

Sequences:

>Translated_365_residues
MSIFTMLLNIDSNTTPIEAPIHREEREIKKVWYLAAPQNLNPSLRETSTSSEDVTEGLQTIPETSSTDNEEQQTKNSTSF
WDPESVTIDFRYFTTNFEQDNLLIQPSITGTLPNGDRLSLTSGFNRFQQPEIDSIQNIPLQFDWEGKIAGLESDIGTGID
WFDRVTPALSFRANSRVNIGERASLSFFVEHAPYKFNAKTVENEITNWRYGPNLFWQISPDTSFFSLVRWGRYSDGNHEQ
QSFSRLEHTSGEFQLAANLFNWRYREDKEIESGYFSPEDFLVINGELIWNKNIFSWLDCNLSTSVGRQRLQGQWDFVYGY
GGRCTTTIAEDIFWDLDYRFSNVLGDNSNSRYNSETWRIILRVQL
>Mature_364_residues
SIFTMLLNIDSNTTPIEAPIHREEREIKKVWYLAAPQNLNPSLRETSTSSEDVTEGLQTIPETSSTDNEEQQTKNSTSFW
DPESVTIDFRYFTTNFEQDNLLIQPSITGTLPNGDRLSLTSGFNRFQQPEIDSIQNIPLQFDWEGKIAGLESDIGTGIDW
FDRVTPALSFRANSRVNIGERASLSFFVEHAPYKFNAKTVENEITNWRYGPNLFWQISPDTSFFSLVRWGRYSDGNHEQQ
SFSRLEHTSGEFQLAANLFNWRYREDKEIESGYFSPEDFLVINGELIWNKNIFSWLDCNLSTSVGRQRLQGQWDFVYGYG
GRCTTTIAEDIFWDLDYRFSNVLGDNSNSRYNSETWRIILRVQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42312; Mature: 42181

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIFTMLLNIDSNTTPIEAPIHREEREIKKVWYLAAPQNLNPSLRETSTSSEDVTEGLQT
CCEEEEEEECCCCCCCCCCCCCHHHHHHEEEEEEECCCCCCCCHHHCCCCHHHHHHHHHH
IPETSSTDNEEQQTKNSTSFWDPESVTIDFRYFTTNFEQDNLLIQPSITGTLPNGDRLSL
CCCCCCCCCHHHHHCCCCCCCCCCEEEEEEEEEEECCCCCCEEECCCCEEECCCCCEEEE
TSGFNRFQQPEIDSIQNIPLQFDWEGKIAGLESDIGTGIDWFDRVTPALSFRANSRVNIG
HHCCHHCCCCCCCHHHCCCEEEECCCCEECCCCCCCCCCHHHHHHCHHEEECCCCCCCCC
ERASLSFFVEHAPYKFNAKTVENEITNWRYGPNLFWQISPDTSFFSLVRWGRYSDGNHEQ
CCCCEEEEEECCCEEECCHHHHHHHCCCEECCCEEEEECCCCHHHHHHHCCCCCCCCHHH
QSFSRLEHTSGEFQLAANLFNWRYREDKEIESGYFSPEDFLVINGELIWNKNIFSWLDCN
HHHHHHHCCCCCEEEEEEHHCCCCCCCCCHHCCCCCCCCEEEECCEEEECCCCCEEEECC
LSTSVGRQRLQGQWDFVYGYGGRCTTTIAEDIFWDLDYRFSNVLGDNSNSRYNSETWRII
CCHHHHHHHHCCCEEEEEECCCEEHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCEEEEE
LRVQL
EEEEC
>Mature Secondary Structure 
SIFTMLLNIDSNTTPIEAPIHREEREIKKVWYLAAPQNLNPSLRETSTSSEDVTEGLQT
CEEEEEEECCCCCCCCCCCCCHHHHHHEEEEEEECCCCCCCCHHHCCCCHHHHHHHHHH
IPETSSTDNEEQQTKNSTSFWDPESVTIDFRYFTTNFEQDNLLIQPSITGTLPNGDRLSL
CCCCCCCCCHHHHHCCCCCCCCCCEEEEEEEEEEECCCCCCEEECCCCEEECCCCCEEEE
TSGFNRFQQPEIDSIQNIPLQFDWEGKIAGLESDIGTGIDWFDRVTPALSFRANSRVNIG
HHCCHHCCCCCCCHHHCCCEEEECCCCEECCCCCCCCCCHHHHHHCHHEEECCCCCCCCC
ERASLSFFVEHAPYKFNAKTVENEITNWRYGPNLFWQISPDTSFFSLVRWGRYSDGNHEQ
CCCCEEEEEECCCEEECCHHHHHHHCCCEECCCEEEEECCCCHHHHHHHCCCCCCCCHHH
QSFSRLEHTSGEFQLAANLFNWRYREDKEIESGYFSPEDFLVINGELIWNKNIFSWLDCN
HHHHHHHCCCCCEEEEEEHHCCCCCCCCCHHCCCCCCCCEEEECCEEEECCCCCEEEECC
LSTSVGRQRLQGQWDFVYGYGGRCTTTIAEDIFWDLDYRFSNVLGDNSNSRYNSETWRII
CCHHHHHHHHCCCEEEEEECCCEEHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCEEEEE
LRVQL
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA