Click here to switch to the map view.

The map label for this gene is resD [H]

Identifier: 170078714

GI number: 170078714

Start: 2193624

End: 2195699

Strand: Reverse

Name: resD [H]

Synonym: SYNPCC7002_A2115

Alternate gene names: 170078714

Gene position: 2195699-2193624 (Counterclockwise)

Preceding gene: 170078716

Following gene: 170078712

Centisome position: 72.99

GC content: 34.59

Gene sequence:

>2076_bases
GTGTTATCTACTAAGTCCTGTCAAACAAAAATGAAACCAGCCGCCGAAATCCTTCTCATTGATGATGATGCCCTATCCAG
AAAGCTAGTTAAACATATTTTAATCAAAGCGAATTATCGAGTGATTGAAGCGGAAAATGGAGAGCAAGGGATCTCACTCT
TTCAAGAGCGATCGCCAGCTTTGATTTTAGTAGATGCTTTGATGCCCGAACTTGACGGCTTTGATTTTTGTCAGATTATT
AGAGAGTTTCCACAGGGCAAAGATACTCCCATAATGATGTTAACTTCCCTTGGAGATAATCAATCTATCGATAAAGCATT
TCAAATAGGTGTCAGTGATTTTATTACAAAACCCATTCGCACTTCAGTCTTGCTTGGACGGATTCAACATATGTTAAAAC
TTGTTGATACAATACAAGCACTACGCGACAGTAAAAAAGTATATCAAACACTTGTAAGCAGTCTTCAAGAAGTTTTATTT
CACCTTACTCCAGAGGGATATATTACTTTTGTGAATCCGGCTTGGTATCAAATCATGGGCTATCAGCCAGATGAAACAAT
TGGTCAAAATTTTCTCGATTTTCTTCATCCCAAAGAGAAAAATCATAATCAAACAAAGCTGCAAAAAGTACTAGGAAATA
GCAAGATAAGGGCCTATAAAACTCGTTTTATTACGAAACTAGAAGAAGTTCGTTGGGTAAATATTCAAATTTCCGGAAAA
ATCGATAAAAAATCACTAGAATCATCCGGAATCGCTGGCAGACTATACGATATTACTAAAGATTTTTATAATGAAAAATA
TCGTCGATTAGAACATATAATTAACAAAATTATTTCCCGCTCCGACAGTACCAATCTAACCATTCAATACATATTACAAG
CAATTAGCGGAAATTTAGGGTTTTCCCTTGCAGAATTCTGGCTATTAGATCCCCAAAAACAAGAATTAAAAAAAACTGTT
CATTGGCATTTAAAAAAATATGAAATCAAAAGTTCAAACAATGTACCTGACTCTTTTTATCTAGAAGATTGGATGGAAAG
TATTTATGATATTACATCTCACATCAGTGAAATCCAGTCTCAACAAGAAATCCTTGAGGTCGAAAGTACGCATCAATCTT
CCCAGATCATTTCATTTAAATATGCTCAAAACTGCATCCTTAATCATAGCAAAGAAACGCTAGGCTTAATGGTATTTTTT
GATACAAAACAACAAAAAAGAAATGATATTCTCTCAAGGGGTTTAGAGGTTTTAGGAAAACAAATTGGACAGTACCTCAA
AAGAAAACAAATTGAAAAAGAACTACAACAAAAAAATGATCTGCTGCAATTTGAACTTGATCAGGCGGCACATTATGTAG
AGTCACTATTGCCGCATGAAACCCTTTCTAAGACGCACTCCTCAGTACAAATTGAAACACTTTTTAAGCCCTCCAATGCT
CTCGGTGGAGATATCTTTGATTATGTATGGCTTGATCCAGAGAACCTGATGTTCTATGTTTTAGATGTCGCAGGCCATGG
CATCAAATCTTCGCTGCTTTCAGTATCAATTTTAAACATCCTACGTCAACAGGATTATACAAAAATGAATTTGTATGAGC
CTGAAATTGTTTTAGGGAATCTAAATCGATTGTTTCAAATTAATGAGAGTGGTGAAGATTATTTCACTATCTGGTATGGT
GTTTTAAATAAAAAATCTAATATCTTGAAATATGCTTCAGCGGGTCATCCTGAGGCTTTTCTTCTGACTCCAAATAAACA
AAAAGCAGATTATGAAGTTCAAGGTCTAAATTCAGGCAATATTGCTGTAGGGTTATTTTCTAACTTTCCTTTTATATCGG
CTGAAATTGAAGTAACAAAAGAAAGTCGACTTTTCCTTTTTAGCGATGGCACCTATGAATTTTTTATCAATGAAAACAAA
AACATATTTGGGCTACAAAACTGGCGTCAGTTAATCTTGTCCTATGCTCGATCACATTCATCACCCGATTTGCAATTTCT
TTTTCAACAAATCAACCATCTCAATTATGACTACGAGTTGGAGGATGATTGTTCAATCATGGAAATAATATTTTAA

Upstream 100 bases:

>100_bases
ACAAAGTCTGATACTAATATTAATCCTGAGTTTTAAACAAAACAAATAACTACTTTAGCCTGCCTGGATTACTCCAGCGC
AATATACACATATCTTTTTT

Downstream 100 bases:

>100_bases
TCAAAAATATCTCATGTATTTAGGTCACGTCATTTTAAAACTAAATTTCTCGAAGAAATAGCTTTCAAAAAAACAAACTC
AAAAACTCCAATGACGTAAA

Product: two-component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 691; Mature: 691

Protein sequence:

>691_residues
MLSTKSCQTKMKPAAEILLIDDDALSRKLVKHILIKANYRVIEAENGEQGISLFQERSPALILVDALMPELDGFDFCQII
REFPQGKDTPIMMLTSLGDNQSIDKAFQIGVSDFITKPIRTSVLLGRIQHMLKLVDTIQALRDSKKVYQTLVSSLQEVLF
HLTPEGYITFVNPAWYQIMGYQPDETIGQNFLDFLHPKEKNHNQTKLQKVLGNSKIRAYKTRFITKLEEVRWVNIQISGK
IDKKSLESSGIAGRLYDITKDFYNEKYRRLEHIINKIISRSDSTNLTIQYILQAISGNLGFSLAEFWLLDPQKQELKKTV
HWHLKKYEIKSSNNVPDSFYLEDWMESIYDITSHISEIQSQQEILEVESTHQSSQIISFKYAQNCILNHSKETLGLMVFF
DTKQQKRNDILSRGLEVLGKQIGQYLKRKQIEKELQQKNDLLQFELDQAAHYVESLLPHETLSKTHSSVQIETLFKPSNA
LGGDIFDYVWLDPENLMFYVLDVAGHGIKSSLLSVSILNILRQQDYTKMNLYEPEIVLGNLNRLFQINESGEDYFTIWYG
VLNKKSNILKYASAGHPEAFLLTPNKQKADYEVQGLNSGNIAVGLFSNFPFISAEIEVTKESRLFLFSDGTYEFFINENK
NIFGLQNWRQLILSYARSHSSPDLQFLFQQINHLNYDYELEDDCSIMEIIF

Sequences:

>Translated_691_residues
MLSTKSCQTKMKPAAEILLIDDDALSRKLVKHILIKANYRVIEAENGEQGISLFQERSPALILVDALMPELDGFDFCQII
REFPQGKDTPIMMLTSLGDNQSIDKAFQIGVSDFITKPIRTSVLLGRIQHMLKLVDTIQALRDSKKVYQTLVSSLQEVLF
HLTPEGYITFVNPAWYQIMGYQPDETIGQNFLDFLHPKEKNHNQTKLQKVLGNSKIRAYKTRFITKLEEVRWVNIQISGK
IDKKSLESSGIAGRLYDITKDFYNEKYRRLEHIINKIISRSDSTNLTIQYILQAISGNLGFSLAEFWLLDPQKQELKKTV
HWHLKKYEIKSSNNVPDSFYLEDWMESIYDITSHISEIQSQQEILEVESTHQSSQIISFKYAQNCILNHSKETLGLMVFF
DTKQQKRNDILSRGLEVLGKQIGQYLKRKQIEKELQQKNDLLQFELDQAAHYVESLLPHETLSKTHSSVQIETLFKPSNA
LGGDIFDYVWLDPENLMFYVLDVAGHGIKSSLLSVSILNILRQQDYTKMNLYEPEIVLGNLNRLFQINESGEDYFTIWYG
VLNKKSNILKYASAGHPEAFLLTPNKQKADYEVQGLNSGNIAVGLFSNFPFISAEIEVTKESRLFLFSDGTYEFFINENK
NIFGLQNWRQLILSYARSHSSPDLQFLFQQINHLNYDYELEDDCSIMEIIF
>Mature_691_residues
MLSTKSCQTKMKPAAEILLIDDDALSRKLVKHILIKANYRVIEAENGEQGISLFQERSPALILVDALMPELDGFDFCQII
REFPQGKDTPIMMLTSLGDNQSIDKAFQIGVSDFITKPIRTSVLLGRIQHMLKLVDTIQALRDSKKVYQTLVSSLQEVLF
HLTPEGYITFVNPAWYQIMGYQPDETIGQNFLDFLHPKEKNHNQTKLQKVLGNSKIRAYKTRFITKLEEVRWVNIQISGK
IDKKSLESSGIAGRLYDITKDFYNEKYRRLEHIINKIISRSDSTNLTIQYILQAISGNLGFSLAEFWLLDPQKQELKKTV
HWHLKKYEIKSSNNVPDSFYLEDWMESIYDITSHISEIQSQQEILEVESTHQSSQIISFKYAQNCILNHSKETLGLMVFF
DTKQQKRNDILSRGLEVLGKQIGQYLKRKQIEKELQQKNDLLQFELDQAAHYVESLLPHETLSKTHSSVQIETLFKPSNA
LGGDIFDYVWLDPENLMFYVLDVAGHGIKSSLLSVSILNILRQQDYTKMNLYEPEIVLGNLNRLFQINESGEDYFTIWYG
VLNKKSNILKYASAGHPEAFLLTPNKQKADYEVQGLNSGNIAVGLFSNFPFISAEIEVTKESRLFLFSDGTYEFFINENK
NIFGLQNWRQLILSYARSHSSPDLQFLFQQINHLNYDYELEDDCSIMEIIF

Specific function: Member of the two-component regulatory system ResD/ResE. Required for the expression of resA, ctaA, qcrABC and fnr; activation role in global regulation of aerobic and anaerobic respiration [H]

COG id: COG2208

COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=122, Percent_Identity=28.6885245901639, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1789809, Length=118, Percent_Identity=32.2033898305085, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1786784, Length=118, Percent_Identity=27.9661016949153, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 79799; Mature: 79799

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: PS50112 PAS ; PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSTKSCQTKMKPAAEILLIDDDALSRKLVKHILIKANYRVIEAENGEQGISLFQERSPA
CCCCCCHHHCCCCCEEEEEECCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHCCCCC
LILVDALMPELDGFDFCQIIREFPQGKDTPIMMLTSLGDNQSIDKAFQIGVSDFITKPIR
EEEEEHHCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHCHHHHHCCHHH
TSVLLGRIQHMLKLVDTIQALRDSKKVYQTLVSSLQEVLFHLTPEGYITFVNPAWYQIMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEC
YQPDETIGQNFLDFLHPKEKNHNQTKLQKVLGNSKIRAYKTRFITKLEEVRWVNIQISGK
CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEEEEECC
IDKKSLESSGIAGRLYDITKDFYNEKYRRLEHIINKIISRSDSTNLTIQYILQAISGNLG
CCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC
FSLAEFWLLDPQKQELKKTVHWHLKKYEIKSSNNVPDSFYLEDWMESIYDITSHISEIQS
CHHHHHHCCCCCHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QQEILEVESTHQSSQIISFKYAQNCILNHSKETLGLMVFFDTKQQKRNDILSRGLEVLGK
HHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHH
QIGQYLKRKQIEKELQQKNDLLQFELDQAAHYVESLLPHETLSKTHSSVQIETLFKPSNA
HHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCHHHHHHCCCCEEEEEEECCCCC
LGGDIFDYVWLDPENLMFYVLDVAGHGIKSSLLSVSILNILRQQDYTKMNLYEPEIVLGN
CCCCHHEEEEECCCCEEEEEEEHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEC
LNRLFQINESGEDYFTIWYGVLNKKSNILKYASAGHPEAFLLTPNKQKADYEVQGLNSGN
CCCEEEECCCCCCEEEEEEEHHCCCCCHHHHHCCCCCCEEEECCCCCCCCEEEECCCCCC
IAVGLFSNFPFISAEIEVTKESRLFLFSDGTYEFFINENKNIFGLQNWRQLILSYARSHS
EEEEEECCCCEEEEEEEEECCCEEEEEECCEEEEEEECCCCEECHHHHHHHHHHHHHCCC
SPDLQFLFQQINHLNYDYELEDDCSIMEIIF
CCHHHHHHHHHHHCCCCCCCCCCCCHHHHCC
>Mature Secondary Structure
MLSTKSCQTKMKPAAEILLIDDDALSRKLVKHILIKANYRVIEAENGEQGISLFQERSPA
CCCCCCHHHCCCCCEEEEEECCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHCCCCC
LILVDALMPELDGFDFCQIIREFPQGKDTPIMMLTSLGDNQSIDKAFQIGVSDFITKPIR
EEEEEHHCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHCHHHHHCCHHH
TSVLLGRIQHMLKLVDTIQALRDSKKVYQTLVSSLQEVLFHLTPEGYITFVNPAWYQIMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEC
YQPDETIGQNFLDFLHPKEKNHNQTKLQKVLGNSKIRAYKTRFITKLEEVRWVNIQISGK
CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEEEEECC
IDKKSLESSGIAGRLYDITKDFYNEKYRRLEHIINKIISRSDSTNLTIQYILQAISGNLG
CCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC
FSLAEFWLLDPQKQELKKTVHWHLKKYEIKSSNNVPDSFYLEDWMESIYDITSHISEIQS
CHHHHHHCCCCCHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QQEILEVESTHQSSQIISFKYAQNCILNHSKETLGLMVFFDTKQQKRNDILSRGLEVLGK
HHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHH
QIGQYLKRKQIEKELQQKNDLLQFELDQAAHYVESLLPHETLSKTHSSVQIETLFKPSNA
HHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCHHHHHHCCCCEEEEEEECCCCC
LGGDIFDYVWLDPENLMFYVLDVAGHGIKSSLLSVSILNILRQQDYTKMNLYEPEIVLGN
CCCCHHEEEEECCCCEEEEEEEHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEC
LNRLFQINESGEDYFTIWYGVLNKKSNILKYASAGHPEAFLLTPNKQKADYEVQGLNSGN
CCCEEEECCCCCCEEEEEEEHHCCCCCHHHHHCCCCCCEEEECCCCCCCCEEEECCCCCC
IAVGLFSNFPFISAEIEVTKESRLFLFSDGTYEFFINENKNIFGLQNWRQLILSYARSHS
EEEEEECCCCEEEEEEEEECCCEEEEEECCEEEEEEECCCCEECHHHHHHHHHHHHHCCC
SPDLQFLFQQINHLNYDYELEDDCSIMEIIF
CCHHHHHHHHHHHCCCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934829; 9384377; 8631715; 8682783 [H]