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The map label for this gene is ureD

Identifier: 170078722

GI number: 170078722

Start: 2207331

End: 2208188

Strand: Reverse

Name: ureD

Synonym: SYNPCC7002_A2123

Alternate gene names: 170078722

Gene position: 2208188-2207331 (Counterclockwise)

Preceding gene: 170078727

Following gene: 170078716

Centisome position: 73.41

GC content: 55.24

Gene sequence:

>858_bases
ATGCAAGATCAACAACAGGTGATTCACAAAGCGCAGCCCTGGCACGGCAAGGTGGGCTTAATTTACGGGCAACGCCAGGG
CAAGACGGAAATGCAACGCTGTTTTACCCAAGCGCCGTTTCGCATCCAGCGGCCTTTTTATCCGGAAGGAAATCGAGTTT
GTCACACGGTCTTGCTCCACACGGCAGGGGGCATTGTCGGCGGCGATCGCCTATCTCTGGATCTCGAACTGAAGCCAGAA
AGTCATGTTTTCCTCACAACGGCAGCAGCCAACAAAATTTATCGTACTAACGGGGAAACGGCGCAACAGGACGGCATTAT
TCACCAGGCACCGGGCAGCATTTTGGAATACTTTCCCCAGGAAATGATTATTTTCGATGGGGCGGAATATCACCAGAGCC
TGCGGGTCAATCTGGCTCCCGGTGCGGTGTGGTGTGGCTGGGAAGTTCTTCGGTTTGGGCGCACGGCCCGGGGCGAAAAA
TTCATCTCTGGTAACTGGCGGGGGCTGACAGAAATTTGGCAAGATGATGAACTGCTCTGGGGCGATCGCCAATGGCTACC
GGGACATCCAGAAGTCTTCGCCGCCTGGAATGGTCTGAATAATCAGCCGGTGGTGGGAAGTCTGGCCTTGGTGGGGCTAG
AGATTAGCGAGGCTCAAATGGCGGAGTTGCGACAAACCATGGCCACCATTCAGCAGGGCTTGGGCGGGATCACACAATTA
CCCAAAGGCGTGCTCTGTCGCTACCGGGGCCCCTCCAGCACGGAAGTAAAACGCTGGTTTATCTCCCTTTGGCAAAATTG
GCGATCGCTCTATTCCCCGCAACCACCAACCCTGTCCCGCGTCTGGCAGACCTATTAA

Upstream 100 bases:

>100_bases
TCTGCCCGGATCAGTGGGATGATCGAAAAAATAGACTGCTGCTGGGGGCTGTTTTGGCAGTAATTTTTAGTCCCCCTAAT
CCCATCAATTTCAGACAAAA

Downstream 100 bases:

>100_bases
CCCATCCCTAGCTCCCCAAAACATTCTCCCCTTTAAGGCTACTGTGTACACACAAGTGTGGATTGAGCGAGCTTCCATCC
ATGGAAGATAGATTCAAACT

Product: urease accessory protein, UreD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MQDQQQVIHKAQPWHGKVGLIYGQRQGKTEMQRCFTQAPFRIQRPFYPEGNRVCHTVLLHTAGGIVGGDRLSLDLELKPE
SHVFLTTAAANKIYRTNGETAQQDGIIHQAPGSILEYFPQEMIIFDGAEYHQSLRVNLAPGAVWCGWEVLRFGRTARGEK
FISGNWRGLTEIWQDDELLWGDRQWLPGHPEVFAAWNGLNNQPVVGSLALVGLEISEAQMAELRQTMATIQQGLGGITQL
PKGVLCRYRGPSSTEVKRWFISLWQNWRSLYSPQPPTLSRVWQTY

Sequences:

>Translated_285_residues
MQDQQQVIHKAQPWHGKVGLIYGQRQGKTEMQRCFTQAPFRIQRPFYPEGNRVCHTVLLHTAGGIVGGDRLSLDLELKPE
SHVFLTTAAANKIYRTNGETAQQDGIIHQAPGSILEYFPQEMIIFDGAEYHQSLRVNLAPGAVWCGWEVLRFGRTARGEK
FISGNWRGLTEIWQDDELLWGDRQWLPGHPEVFAAWNGLNNQPVVGSLALVGLEISEAQMAELRQTMATIQQGLGGITQL
PKGVLCRYRGPSSTEVKRWFISLWQNWRSLYSPQPPTLSRVWQTY
>Mature_285_residues
MQDQQQVIHKAQPWHGKVGLIYGQRQGKTEMQRCFTQAPFRIQRPFYPEGNRVCHTVLLHTAGGIVGGDRLSLDLELKPE
SHVFLTTAAANKIYRTNGETAQQDGIIHQAPGSILEYFPQEMIIFDGAEYHQSLRVNLAPGAVWCGWEVLRFGRTARGEK
FISGNWRGLTEIWQDDELLWGDRQWLPGHPEVFAAWNGLNNQPVVGSLALVGLEISEAQMAELRQTMATIQQGLGGITQL
PKGVLCRYRGPSSTEVKRWFISLWQNWRSLYSPQPPTLSRVWQTY

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): URED_SYNP2 (B1XIC0)

Other databases:

- EMBL:   CP000951
- RefSeq:   YP_001735360.1
- GeneID:   6055332
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A2123
- HOGENOM:   HBG711156
- ProtClustDB:   CLSK896018
- GO:   GO:0005737
- HAMAP:   MF_01384
- InterPro:   IPR002669

Pfam domain/function: PF01774 UreD

EC number: NA

Molecular weight: Translated: 32352; Mature: 32352

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDQQQVIHKAQPWHGKVGLIYGQRQGKTEMQRCFTQAPFRIQRPFYPEGNRVCHTVLLH
CCCHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHH
TAGGIVGGDRLSLDLELKPESHVFLTTAAANKIYRTNGETAQQDGIIHQAPGSILEYFPQ
HCCCEECCCEEEEEEEECCCCCEEEEEECCCCEEECCCCCHHHCCCEECCCCHHHHHCCC
EMIIFDGAEYHQSLRVNLAPGAVWCGWEVLRFGRTARGEKFISGNWRGLTEIWQDDELLW
CEEEECCHHHHCEEEEEECCCCCHHHHHHHHCCCCCCCCEEECCCCCCHHHHHCCCCEEE
GDRQWLPGHPEVFAAWNGLNNQPVVGSLALVGLEISEAQMAELRQTMATIQQGLGGITQL
CCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCHHHC
PKGVLCRYRGPSSTEVKRWFISLWQNWRSLYSPQPPTLSRVWQTY
CCHHEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCC
>Mature Secondary Structure
MQDQQQVIHKAQPWHGKVGLIYGQRQGKTEMQRCFTQAPFRIQRPFYPEGNRVCHTVLLH
CCCHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHH
TAGGIVGGDRLSLDLELKPESHVFLTTAAANKIYRTNGETAQQDGIIHQAPGSILEYFPQ
HCCCEECCCEEEEEEEECCCCCEEEEEECCCCEEECCCCCHHHCCCEECCCCHHHHHCCC
EMIIFDGAEYHQSLRVNLAPGAVWCGWEVLRFGRTARGEKFISGNWRGLTEIWQDDELLW
CEEEECCHHHHCEEEEEECCCCCHHHHHHHHCCCCCCCCEEECCCCCCHHHHHCCCCEEE
GDRQWLPGHPEVFAAWNGLNNQPVVGSLALVGLEISEAQMAELRQTMATIQQGLGGITQL
CCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCHHHC
PKGVLCRYRGPSSTEVKRWFISLWQNWRSLYSPQPPTLSRVWQTY
CCHHEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA