| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078660
Identifier: 170078660
GI number: 170078660
Start: 2140394
End: 2141332
Strand: Direct
Name: 170078660
Synonym: SYNPCC7002_A2056
Alternate gene names: NA
Gene position: 2140394-2141332 (Clockwise)
Preceding gene: 170078657
Following gene: 170078673
Centisome position: 71.16
GC content: 52.5
Gene sequence:
>939_bases GTGCCGTTCTATCAAAGTTGCGATCGCCTCACGGAACTAGGACAGCAAATTTTACAGACGACCTGGCGCAAATTTCCCAG CCTGAGTCCCGAACAAATCGCCCTAACGTGGTTGGTCTATGACAATCCGGTGGTGGTCAATACCGATGGTGCCCTTTCGC CAGAAGCTTTTTGGGAGCACCCAGTCCGGGGGTTTCAATATCGGGGTGATGTGCGCCTTTATCCGGCGAGTGTGGTGAAA CTTTTTTATTTAGTAGCGATCCACGAATGGCTAGAGGGACGAATGCTCCAGAACAGCACCGAGCTAGAACGGGCAATCCA GGACATGATTGTTGAGTCGAGTAACGACGCCACGAGCTACATTGTCGATAGTCTCACCGGAACCACCAGCGGCCCGGAAC TCCCCCCAGAACCCCTGCAAACCTGGAGCCACCAGCGCAACATTATCAATCGCTATTATCAGTCCCTCGGTTGGGCGGAA CTCGCGCCGATCAATGTCAATCAAAAACCTTGGAGTAATGGCCCCTATGGTCGGGAGCGGCAGTTTTTGGGGGCAAACTA TGAAAATCGAAATATGCTCACCACCAATGCAATCGTCCGGTTATTTCACAGCATTATGGGCGGCGTTGCCGTCTCCCGTG AACGGTGCCAAAGCATGATTCATTTATTGAACCGCTCCCTTGATCCGGCGGATCTGCAGGAATTTGACGAGGAAAATCAA GTAACTGGCTTTTTGGGGGAAGTGCTCCCAGACGGTAGTCAACTGTGGTCGAAGGCGGGTTGGACGAGCCGCGCCCGCCA TGATGCTGCCTACATCGAAGTGCCGGGGCAGCAACCTTATTTATTGGTTGTGTTCACAGAAGGGGAAGCCAATGCGAAAA ATCGCGCCATTCTCCCTTTTATTTCCCAGGAAATCCTGGGGGCGATCGCCAATATTTAA
Upstream 100 bases:
>100_bases AAAATTTAAGACCGTTTGCCAGGGTTCCGCCATCGATAACCGTGCCTCCCACTGAAAATATGCCAGAATCTTACCATTAA TGTAAGCAAGGAGAGAGGGT
Downstream 100 bases:
>100_bases CGCACTTGAATGGTTGTCTCAAGGGAGACGGTGCCTGAAAGGGAATTCGTAATCAAACAATTGGCTTCTGCTTTATGGAG GAGGCGATCGCCTTTGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MPFYQSCDRLTELGQQILQTTWRKFPSLSPEQIALTWLVYDNPVVVNTDGALSPEAFWEHPVRGFQYRGDVRLYPASVVK LFYLVAIHEWLEGRMLQNSTELERAIQDMIVESSNDATSYIVDSLTGTTSGPELPPEPLQTWSHQRNIINRYYQSLGWAE LAPINVNQKPWSNGPYGRERQFLGANYENRNMLTTNAIVRLFHSIMGGVAVSRERCQSMIHLLNRSLDPADLQEFDEENQ VTGFLGEVLPDGSQLWSKAGWTSRARHDAAYIEVPGQQPYLLVVFTEGEANAKNRAILPFISQEILGAIANI
Sequences:
>Translated_312_residues MPFYQSCDRLTELGQQILQTTWRKFPSLSPEQIALTWLVYDNPVVVNTDGALSPEAFWEHPVRGFQYRGDVRLYPASVVK LFYLVAIHEWLEGRMLQNSTELERAIQDMIVESSNDATSYIVDSLTGTTSGPELPPEPLQTWSHQRNIINRYYQSLGWAE LAPINVNQKPWSNGPYGRERQFLGANYENRNMLTTNAIVRLFHSIMGGVAVSRERCQSMIHLLNRSLDPADLQEFDEENQ VTGFLGEVLPDGSQLWSKAGWTSRARHDAAYIEVPGQQPYLLVVFTEGEANAKNRAILPFISQEILGAIANI >Mature_311_residues PFYQSCDRLTELGQQILQTTWRKFPSLSPEQIALTWLVYDNPVVVNTDGALSPEAFWEHPVRGFQYRGDVRLYPASVVKL FYLVAIHEWLEGRMLQNSTELERAIQDMIVESSNDATSYIVDSLTGTTSGPELPPEPLQTWSHQRNIINRYYQSLGWAEL APINVNQKPWSNGPYGRERQFLGANYENRNMLTTNAIVRLFHSIMGGVAVSRERCQSMIHLLNRSLDPADLQEFDEENQV TGFLGEVLPDGSQLWSKAGWTSRARHDAAYIEVPGQQPYLLVVFTEGEANAKNRAILPFISQEILGAIANI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35387; Mature: 35256
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFYQSCDRLTELGQQILQTTWRKFPSLSPEQIALTWLVYDNPVVVNTDGALSPEAFWEH CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEEEECCCCCCHHHHHHC PVRGFQYRGDVRLYPASVVKLFYLVAIHEWLEGRMLQNSTELERAIQDMIVESSNDATSY CCCCCEECCCEEECHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHCCCCCHHHH IVDSLTGTTSGPELPPEPLQTWSHQRNIINRYYQSLGWAELAPINVNQKPWSNGPYGRER HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC QFLGANYENRNMLTTNAIVRLFHSIMGGVAVSRERCQSMIHLLNRSLDPADLQEFDEENQ HHCCCCCCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCH VTGFLGEVLPDGSQLWSKAGWTSRARHDAAYIEVPGQQPYLLVVFTEGEANAKNRAILPF HHHHHHHHCCCHHHHHHHCCCCCHHHCCCEEEECCCCCCEEEEEEECCCCCCCCCEEHHH ISQEILGAIANI HHHHHHHHHHCC >Mature Secondary Structure PFYQSCDRLTELGQQILQTTWRKFPSLSPEQIALTWLVYDNPVVVNTDGALSPEAFWEH CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEEEECCCCCCHHHHHHC PVRGFQYRGDVRLYPASVVKLFYLVAIHEWLEGRMLQNSTELERAIQDMIVESSNDATSY CCCCCEECCCEEECHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHCCCCCHHHH IVDSLTGTTSGPELPPEPLQTWSHQRNIINRYYQSLGWAELAPINVNQKPWSNGPYGRER HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC QFLGANYENRNMLTTNAIVRLFHSIMGGVAVSRERCQSMIHLLNRSLDPADLQEFDEENQ HHCCCCCCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCH VTGFLGEVLPDGSQLWSKAGWTSRARHDAAYIEVPGQQPYLLVVFTEGEANAKNRAILPF HHHHHHHHCCCHHHHHHHCCCCCHHHCCCEEEECCCCCCEEEEEEECCCCCCCCCEEHHH ISQEILGAIANI HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA