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The map label for this gene is sepF

Identifier: 170078523

GI number: 170078523

Start: 2001475

End: 2002068

Strand: Direct

Name: sepF

Synonym: SYNPCC7002_A1918

Alternate gene names: 170078523

Gene position: 2001475-2002068 (Clockwise)

Preceding gene: 170078522

Following gene: 170078524

Centisome position: 66.54

GC content: 51.85

Gene sequence:

>594_bases
ATGTTCAACAGCATACGTAACTTCCTAGGCTTCAACGAACCAGAAGAATACGAAGAATACTATGAAGGGGAAATTGATAA
CAACGATTATCATGCCCTCTATCCTGCTGAAATGCCCACCCCTTTGCCCGAAGAGAGTGCGCCTGCCCCCCGTCGTCTAC
CTGAAAACCCTACCGTTGCTTCTAACTTTGCCATGAACTCTAACACCACCCCCACTCGTAACAATGTCATCGGCCTCCCT
GGCGTCAGTAACTCCCCGGCTGAAGTGGTTGTTTGTGAGCCCCATTCCTTTGAGGAAATGCCTCAAATTATCCAAGCCCT
TAGGGATCGACGTTCCATTGTCCTCAATCTCAACATGATGGATCCCGACGAAGCACAGCGGGCAGTAGATTTTGTTGCGG
GTGGGACTTTTGCTATTGATGGCCACCAAGAACGGATTGGCGATAGCATTTTCCTCTTTACGCCGAACTGTGTACAAGTC
ACAAATAGCTTAAGCCGCGAAGAAACCCCTGCCACCCCGGCAGCCCCGGCTCGTCCTGCCGCCCCTGCTCCCGCTTGGAG
TGATGAGATGACACCGATGGCCCAGGCTCAATAA

Upstream 100 bases:

>100_bases
GGACAAACAATTTTTGGAGATGTTGCCCACCATCTACCAAGCCGACGAAGCATATCATCAATCAATATTGAAAACCCTAT
AACCAAGGATATTTAGCCCC

Downstream 100 bases:

>100_bases
GAATTGGCCCAACAAAAACGCTGTAAGGTCCAAGGCGATCGCCAAATTTTGGGGATAGATTTTCTGTCCCCTTTTTAGTG
CGCTGCATTTGCCTTCTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MFNSIRNFLGFNEPEEYEEYYEGEIDNNDYHALYPAEMPTPLPEESAPAPRRLPENPTVASNFAMNSNTTPTRNNVIGLP
GVSNSPAEVVVCEPHSFEEMPQIIQALRDRRSIVLNLNMMDPDEAQRAVDFVAGGTFAIDGHQERIGDSIFLFTPNCVQV
TNSLSREETPATPAAPARPAAPAPAWSDEMTPMAQAQ

Sequences:

>Translated_197_residues
MFNSIRNFLGFNEPEEYEEYYEGEIDNNDYHALYPAEMPTPLPEESAPAPRRLPENPTVASNFAMNSNTTPTRNNVIGLP
GVSNSPAEVVVCEPHSFEEMPQIIQALRDRRSIVLNLNMMDPDEAQRAVDFVAGGTFAIDGHQERIGDSIFLFTPNCVQV
TNSLSREETPATPAAPARPAAPAPAWSDEMTPMAQAQ
>Mature_197_residues
MFNSIRNFLGFNEPEEYEEYYEGEIDNNDYHALYPAEMPTPLPEESAPAPRRLPENPTVASNFAMNSNTTPTRNNVIGLP
GVSNSPAEVVVCEPHSFEEMPQIIQALRDRRSIVLNLNMMDPDEAQRAVDFVAGGTFAIDGHQERIGDSIFLFTPNCVQV
TNSLSREETPATPAAPARPAAPAPAWSDEMTPMAQAQ

Specific function: Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of ftsZ protofilaments. Its function overlaps with ftsA

COG id: COG1799

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm. Note=Localizes to the division site, in a ftsZ-dependent manner (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sepF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SEPF_SYNP2 (B1XQL0)

Other databases:

- EMBL:   CP000951
- RefSeq:   YP_001735161.1
- GeneID:   6055844
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A1918
- HOGENOM:   HBG732469
- OMA:   FNEPEEY
- GO:   GO:0005737
- HAMAP:   MF_01197
- InterPro:   IPR023052
- InterPro:   IPR007561

Pfam domain/function: PF04472 DUF552

EC number: NA

Molecular weight: Translated: 21722; Mature: 21722

Theoretical pI: Translated: 4.02; Mature: 4.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNSIRNFLGFNEPEEYEEYYEGEIDNNDYHALYPAEMPTPLPEESAPAPRRLPENPTVA
CCHHHHHHHCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
SNFAMNSNTTPTRNNVIGLPGVSNSPAEVVVCEPHSFEEMPQIIQALRDRRSIVLNLNMM
CEEEECCCCCCCCCCEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
DPDEAQRAVDFVAGGTFAIDGHQERIGDSIFLFTPNCVQVTNSLSREETPATPAAPARPA
CHHHHHHHHHHHCCCEEEECCCHHHHCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCC
APAPAWSDEMTPMAQAQ
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFNSIRNFLGFNEPEEYEEYYEGEIDNNDYHALYPAEMPTPLPEESAPAPRRLPENPTVA
CCHHHHHHHCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
SNFAMNSNTTPTRNNVIGLPGVSNSPAEVVVCEPHSFEEMPQIIQALRDRRSIVLNLNMM
CEEEECCCCCCCCCCEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
DPDEAQRAVDFVAGGTFAIDGHQERIGDSIFLFTPNCVQVTNSLSREETPATPAAPARPA
CHHHHHHHHHHHCCCEEEECCCHHHHCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCC
APAPAWSDEMTPMAQAQ
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA