| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078472
Identifier: 170078472
GI number: 170078472
Start: 1958435
End: 1959937
Strand: Reverse
Name: 170078472
Synonym: SYNPCC7002_A1866
Alternate gene names: NA
Gene position: 1959937-1958435 (Counterclockwise)
Preceding gene: 170078473
Following gene: 170078466
Centisome position: 65.16
GC content: 50.23
Gene sequence:
>1503_bases ATGGCTTTTGAGCTGGACATCGGCGATCTGATTAGCCGCCAAATTAGGGTAGAGGTCGCCCCAGAAGGCCGAGAGATTGG TGATCTTCTTGATGTTTTCGAGGATGACAGCGGGGGCTTCCTTGGGAGAATCTTCTCGTTTACCAAGCAATTAATCGGGT TTGCTTTAAAGGCAATCCCGGTAATTAGATTTCCTTTTTCTTCTCTGTTTGGCTGGGCTGTCCAAGCTTTTAACTTTATT CGCTTCTTTGATTGGAATGCCTCAGACGCCGAATTACAAGCCGGAATCAAACAGCGCAATTTAGCGGTGGCTGATGCCTG GGGCGCTTTCTTTGGGCAATTAGCCGGGACGCTGGTCGTGGGAGGCTTGGGGGCACTGGGGGCGCTATATATTCCCGCCA TTGGGGGCAAAATGTTGGCAATCTCAACCCTCGTCAAGCTGTTTAAAGAACGGGGGGATGAAGTTTTCGAGGAATTGCGC TTTGCTGTTCGACAATCAGCAGTCGTCTTTGGAGAGAAAAAATTTATTCAAGCCTATATTCGTATCCGTCGCCTAATCAA AAATCGTTTCCCTCAGTTAAAGAACTGGGGCGCTGACGATGGCGATCGCTGGACATTTGCTGAGAAATTTGAAGAGAAAA TCGACAGCATCGAAAATGATGGCCTCCGGACATTTTTAGAATCCTTCTTTGATGAATTTGAGGAAGCCTTTATCGAAGGG GGCTATGTGATTGCGGGCTATTGGGACAACCTTATGGCCCAAACCAATGAGAATCGCCTAGAAATCCTAGGGGAAGACAA GGCCGGAACCATTCAGCTCAGGGCTGGGGGAGAAGATACGCCATTCTTGCGTTACATCCAGCTCCCCTCTAATTTGGCGA TCTCCGGTCTCCAGCACCAAATGAATACCTACCGGTCTTTCCAAGGATTAAGAATTGGGGAGTATGGTGGAGAGCCGACC GAGCCGGATAATACCCTACGCCCCTACCTCCGCACCGCCAAAATTATCATGCGGTCTGGGAGTGAAAAGCCACCATTCAC GAATCCCGACGGCACCATTAGCAGCCGCCATCAGATCACCCTGAAATCCCTAAAGCCAGATTTACGTTGGCGAGATTTTA AGCGGGTGTTCCGTCGCCACACCTGGGGGCCATGGAAAATCGAAGTAGTCCTCCAGAGCCGCGCCTCGATTTGGCTCTAT GCTGACAGTCGAGAAAATGGGGTGCTATTTGCGCGGGAAATTGTGGACGAGCTGATCGAGGAAGATGCAATTCGGATCGC CGCCACGATTGAGGAAGTTGACCCAAGGGTGACCCAACGGCCCAAAGTAATTTATCCCCAGGAGGTCTATATCACCCTCA AGCGGGCGATCGCCTCTGGGAGGATTATAGATTTGTCGGGGAAACGCTGGGAGCAACAAAAGTTTACTTATGATCTGTGG CCGGACGATGAGCCATTCGGGACGCCACAATTTATTACAAATTTTCCGGTCGATCCGACCTAA
Upstream 100 bases:
>100_bases ATAAATTCCAGGAAATTGTCAACAATCCCGATTCTGAATACAACATCGATCAAGACGTGAAATTCAAAATTACTGACCGC GATGTGGAGATTGATGAATA
Downstream 100 bases:
>100_bases TCAAAAGGTGATTTTAGGCAAAATTTAGGCAAGAATTAAAAAGAAGTCCTCAAATCCTTTCCTAGTGGCCTTTCTGGAAT AACAATGGGTGTCTGCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 500; Mature: 499
Protein sequence:
>500_residues MAFELDIGDLISRQIRVEVAPEGREIGDLLDVFEDDSGGFLGRIFSFTKQLIGFALKAIPVIRFPFSSLFGWAVQAFNFI RFFDWNASDAELQAGIKQRNLAVADAWGAFFGQLAGTLVVGGLGALGALYIPAIGGKMLAISTLVKLFKERGDEVFEELR FAVRQSAVVFGEKKFIQAYIRIRRLIKNRFPQLKNWGADDGDRWTFAEKFEEKIDSIENDGLRTFLESFFDEFEEAFIEG GYVIAGYWDNLMAQTNENRLEILGEDKAGTIQLRAGGEDTPFLRYIQLPSNLAISGLQHQMNTYRSFQGLRIGEYGGEPT EPDNTLRPYLRTAKIIMRSGSEKPPFTNPDGTISSRHQITLKSLKPDLRWRDFKRVFRRHTWGPWKIEVVLQSRASIWLY ADSRENGVLFAREIVDELIEEDAIRIAATIEEVDPRVTQRPKVIYPQEVYITLKRAIASGRIIDLSGKRWEQQKFTYDLW PDDEPFGTPQFITNFPVDPT
Sequences:
>Translated_500_residues MAFELDIGDLISRQIRVEVAPEGREIGDLLDVFEDDSGGFLGRIFSFTKQLIGFALKAIPVIRFPFSSLFGWAVQAFNFI RFFDWNASDAELQAGIKQRNLAVADAWGAFFGQLAGTLVVGGLGALGALYIPAIGGKMLAISTLVKLFKERGDEVFEELR FAVRQSAVVFGEKKFIQAYIRIRRLIKNRFPQLKNWGADDGDRWTFAEKFEEKIDSIENDGLRTFLESFFDEFEEAFIEG GYVIAGYWDNLMAQTNENRLEILGEDKAGTIQLRAGGEDTPFLRYIQLPSNLAISGLQHQMNTYRSFQGLRIGEYGGEPT EPDNTLRPYLRTAKIIMRSGSEKPPFTNPDGTISSRHQITLKSLKPDLRWRDFKRVFRRHTWGPWKIEVVLQSRASIWLY ADSRENGVLFAREIVDELIEEDAIRIAATIEEVDPRVTQRPKVIYPQEVYITLKRAIASGRIIDLSGKRWEQQKFTYDLW PDDEPFGTPQFITNFPVDPT >Mature_499_residues AFELDIGDLISRQIRVEVAPEGREIGDLLDVFEDDSGGFLGRIFSFTKQLIGFALKAIPVIRFPFSSLFGWAVQAFNFIR FFDWNASDAELQAGIKQRNLAVADAWGAFFGQLAGTLVVGGLGALGALYIPAIGGKMLAISTLVKLFKERGDEVFEELRF AVRQSAVVFGEKKFIQAYIRIRRLIKNRFPQLKNWGADDGDRWTFAEKFEEKIDSIENDGLRTFLESFFDEFEEAFIEGG YVIAGYWDNLMAQTNENRLEILGEDKAGTIQLRAGGEDTPFLRYIQLPSNLAISGLQHQMNTYRSFQGLRIGEYGGEPTE PDNTLRPYLRTAKIIMRSGSEKPPFTNPDGTISSRHQITLKSLKPDLRWRDFKRVFRRHTWGPWKIEVVLQSRASIWLYA DSRENGVLFAREIVDELIEEDAIRIAATIEEVDPRVTQRPKVIYPQEVYITLKRAIASGRIIDLSGKRWEQQKFTYDLWP DDEPFGTPQFITNFPVDPT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57043; Mature: 56911
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFELDIGDLISRQIRVEVAPEGREIGDLLDVFEDDSGGFLGRIFSFTKQLIGFALKAIP CEEECCHHHHHCCEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH VIRFPFSSLFGWAVQAFNFIRFFDWNASDAELQAGIKQRNLAVADAWGAFFGQLAGTLVV HHCCCHHHHHHHHHHHHHHHHEECCCCCCHHHHHCHHHCCEEEHHHHHHHHHHHHHHHHH GGLGALGALYIPAIGGKMLAISTLVKLFKERGDEVFEELRFAVRQSAVVFGEKKFIQAYI HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIRRLIKNRFPQLKNWGADDGDRWTFAEKFEEKIDSIENDGLRTFLESFFDEFEEAFIEG HHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC GYVIAGYWDNLMAQTNENRLEILGEDKAGTIQLRAGGEDTPFLRYIQLPSNLAISGLQHQ CEEEEEEHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHH MNTYRSFQGLRIGEYGGEPTEPDNTLRPYLRTAKIIMRSGSEKPPFTNPDGTISSRHQIT HHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEE LKSLKPDLRWRDFKRVFRRHTWGPWKIEVVLQSRASIWLYADSRENGVLFAREIVDELIE HHHCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEECCCCCCEEEHHHHHHHHHH EDAIRIAATIEEVDPRVTQRPKVIYPQEVYITLKRAIASGRIIDLSGKRWEQQKFTYDLW HHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEECC PDDEPFGTPQFITNFPVDPT CCCCCCCCCHHHCCCCCCCC >Mature Secondary Structure AFELDIGDLISRQIRVEVAPEGREIGDLLDVFEDDSGGFLGRIFSFTKQLIGFALKAIP EEECCHHHHHCCEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH VIRFPFSSLFGWAVQAFNFIRFFDWNASDAELQAGIKQRNLAVADAWGAFFGQLAGTLVV HHCCCHHHHHHHHHHHHHHHHEECCCCCCHHHHHCHHHCCEEEHHHHHHHHHHHHHHHHH GGLGALGALYIPAIGGKMLAISTLVKLFKERGDEVFEELRFAVRQSAVVFGEKKFIQAYI HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIRRLIKNRFPQLKNWGADDGDRWTFAEKFEEKIDSIENDGLRTFLESFFDEFEEAFIEG HHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC GYVIAGYWDNLMAQTNENRLEILGEDKAGTIQLRAGGEDTPFLRYIQLPSNLAISGLQHQ CEEEEEEHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHH MNTYRSFQGLRIGEYGGEPTEPDNTLRPYLRTAKIIMRSGSEKPPFTNPDGTISSRHQIT HHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEE LKSLKPDLRWRDFKRVFRRHTWGPWKIEVVLQSRASIWLYADSRENGVLFAREIVDELIE HHHCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEECCCCCCEEEHHHHHHHHHH EDAIRIAATIEEVDPRVTQRPKVIYPQEVYITLKRAIASGRIIDLSGKRWEQQKFTYDLW HHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEECC PDDEPFGTPQFITNFPVDPT CCCCCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA