Click here to switch to the map view.

The map label for this gene is 170078466

Identifier: 170078466

GI number: 170078466

Start: 1949292

End: 1950734

Strand: Reverse

Name: 170078466

Synonym: SYNPCC7002_A1860

Alternate gene names: NA

Gene position: 1950734-1949292 (Counterclockwise)

Preceding gene: 170078472

Following gene: 170078465

Centisome position: 64.85

GC content: 49.69

Gene sequence:

>1443_bases
ATGCAGCAATTGCGGTCTTTGCAAAATGCCTGTTGGCAGCACCAATTACCCGTAACGGTCGTCCTCGAAGGCTGGGCGGC
GGCTGGCAAGGGCGCTTTAGTCAAAAAAATGACCAACTACATGGATCCCCGTGGGTTTTCGGTATTACCGATCTTTGAAC
CCTCAGCCCGTGAGAAGCAATATCCATTTCTTTGGCGCTTTTGGCATAAGCTCCCGGCGAAGGGCAGTATCGCTTTTTTC
TACCACAGTTGGTACACCCACGTCCTCGAAGACCGTCTGTTTGAGCGGCTGGACCCGGTGGAAGTGCCCCTGGTGACGCG
GGAAATTAATGCTTTTGAGCGGCAGCTAGTAGACGATGGCATGGCGATCGCCAAATTTTGGATTCATCTGTCCCAAAAAG
AATTAAAAAAACGCCTCAAAAGTGCCGAAGCCGATGAATTAGAAGCCTGGCGAGTGCGTCCGGAAGATTGGCAACAGGCG
AAAAACTACAAAGAATATCGGCACCTCGCGGAGGAAATGTTGATCTACTCCAGCACCGGTGCCGCTCCCTGGATTCTCGT
CGAGGGCAACGATTACCGGTGGTCGGAAATCAAGGTGCTCTCCCAATTGGTAGCGACCATTGTCGAAGCCCTGGATCGCT
GCAAAATCACTATTCCTGAAGCGGTTCATATTCGTCCCCAGTCCCAACTCTTGCCCACGGAACCAGACTTTCTTGCCAAG
GTGGATTTAAGCCTAGAACTAGAGGACAAAGACTACAAAAAACGTCTCCGGGCGGCCCAAATTAAATTACGGCAACTGCA
ACTCAAGATTCACCAAGAAAAATTACCAGTTCTTCTGTTGTTTGAAGGCTGGGATGCTGCGGGCAAAGGGGGAGCCATTA
AACGCTTAACTGATGTCCTCGATCCCCGTAGCTATAAAGTGGATGCCTTTGGTGCGCCTACCGAAGAAGAAAACCGTTAC
CATTACCTCTGGCGTTTTTCTCGCCATTTACCCGGTATGGGGACGATTGGTATTTTTGACCGCAGTTGGTACGGGCGCGT
TTTAGTTGAACGGGTCGAAGGCTTTGCGACGGAAGCCGAATGGAAGCGGGCCTATCGCGAAATCAATGAGTTTGAAGCCC
AGCTAATTCATAAGGGTTATGTGCTTGTAAAATTTTGGCTCCACATTGACCCGGATGAACAACTAAAACGCTTTGAGCAA
CGACAGGACAATATTTTCAAAAAATATAAGCTGACCGACGAAGATTGGCGCAATCGAGAAAAATGGGATCAATATGCAGT
AGCCATTAATCAGGCGATCGCCCGCACCAGTACCCCCGCCGCCCCCTGGACGATTGTGCCGGCCAATGACAAACTTTATG
CCCGTGTTTTTGTGATTGAGACCGTTATCGAAGCGATCGAGTACAAACTCAAACGTCTAAAAAATGGTGAAGCCATTGCC
TAA

Upstream 100 bases:

>100_bases
TAGTGAAGCACTCTTGGAATGCAAAAGGCGCGTGTTAAATACCCTTGATCTAAAGCGAACCCTAGCAAAGGACACCTACA
AAGAACAATTAGAGGAGTTG

Downstream 100 bases:

>100_bases
GCCAACTAACAAATCACTTAAAAGTCTCTCTTATCCTTCAATCTCAAGAGATCTCCAGAACGACAAAAATATATTATTTA
TTACTGCTTGGACACCCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: URF2 [H]

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MQQLRSLQNACWQHQLPVTVVLEGWAAAGKGALVKKMTNYMDPRGFSVLPIFEPSAREKQYPFLWRFWHKLPAKGSIAFF
YHSWYTHVLEDRLFERLDPVEVPLVTREINAFERQLVDDGMAIAKFWIHLSQKELKKRLKSAEADELEAWRVRPEDWQQA
KNYKEYRHLAEEMLIYSSTGAAPWILVEGNDYRWSEIKVLSQLVATIVEALDRCKITIPEAVHIRPQSQLLPTEPDFLAK
VDLSLELEDKDYKKRLRAAQIKLRQLQLKIHQEKLPVLLLFEGWDAAGKGGAIKRLTDVLDPRSYKVDAFGAPTEEENRY
HYLWRFSRHLPGMGTIGIFDRSWYGRVLVERVEGFATEAEWKRAYREINEFEAQLIHKGYVLVKFWLHIDPDEQLKRFEQ
RQDNIFKKYKLTDEDWRNREKWDQYAVAINQAIARTSTPAAPWTIVPANDKLYARVFVIETVIEAIEYKLKRLKNGEAIA

Sequences:

>Translated_480_residues
MQQLRSLQNACWQHQLPVTVVLEGWAAAGKGALVKKMTNYMDPRGFSVLPIFEPSAREKQYPFLWRFWHKLPAKGSIAFF
YHSWYTHVLEDRLFERLDPVEVPLVTREINAFERQLVDDGMAIAKFWIHLSQKELKKRLKSAEADELEAWRVRPEDWQQA
KNYKEYRHLAEEMLIYSSTGAAPWILVEGNDYRWSEIKVLSQLVATIVEALDRCKITIPEAVHIRPQSQLLPTEPDFLAK
VDLSLELEDKDYKKRLRAAQIKLRQLQLKIHQEKLPVLLLFEGWDAAGKGGAIKRLTDVLDPRSYKVDAFGAPTEEENRY
HYLWRFSRHLPGMGTIGIFDRSWYGRVLVERVEGFATEAEWKRAYREINEFEAQLIHKGYVLVKFWLHIDPDEQLKRFEQ
RQDNIFKKYKLTDEDWRNREKWDQYAVAINQAIARTSTPAAPWTIVPANDKLYARVFVIETVIEAIEYKLKRLKNGEAIA
>Mature_480_residues
MQQLRSLQNACWQHQLPVTVVLEGWAAAGKGALVKKMTNYMDPRGFSVLPIFEPSAREKQYPFLWRFWHKLPAKGSIAFF
YHSWYTHVLEDRLFERLDPVEVPLVTREINAFERQLVDDGMAIAKFWIHLSQKELKKRLKSAEADELEAWRVRPEDWQQA
KNYKEYRHLAEEMLIYSSTGAAPWILVEGNDYRWSEIKVLSQLVATIVEALDRCKITIPEAVHIRPQSQLLPTEPDFLAK
VDLSLELEDKDYKKRLRAAQIKLRQLQLKIHQEKLPVLLLFEGWDAAGKGGAIKRLTDVLDPRSYKVDAFGAPTEEENRY
HYLWRFSRHLPGMGTIGIFDRSWYGRVLVERVEGFATEAEWKRAYREINEFEAQLIHKGYVLVKFWLHIDPDEQLKRFEQ
RQDNIFKKYKLTDEDWRNREKWDQYAVAINQAIARTSTPAAPWTIVPANDKLYARVFVIETVIEAIEYKLKRLKNGEAIA

Specific function: Unknown

COG id: COG2326

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011993
- InterPro:   IPR022488 [H]

Pfam domain/function: PF03976 PPK2 [H]

EC number: NA

Molecular weight: Translated: 56412; Mature: 56412

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQLRSLQNACWQHQLPVTVVLEGWAAAGKGALVKKMTNYMDPRGFSVLPIFEPSAREKQ
CHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCC
YPFLWRFWHKLPAKGSIAFFYHSWYTHVLEDRLFERLDPVEVPLVTREINAFERQLVDDG
CCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
MAIAKFWIHLSQKELKKRLKSAEADELEAWRVRPEDWQQAKNYKEYRHLAEEMLIYSSTG
HHHHHHHHHCCHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCC
AAPWILVEGNDYRWSEIKVLSQLVATIVEALDRCKITIPEAVHIRPQSQLLPTEPDFLAK
CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCEEECCCEEEECCCCCCCCCCCCCEEE
VDLSLELEDKDYKKRLRAAQIKLRQLQLKIHQEKLPVLLLFEGWDAAGKGGAIKRLTDVL
EEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHH
DPRSYKVDAFGAPTEEENRYHYLWRFSRHLPGMGTIGIFDRSWYGRVLVERVEGFATEAE
CCCCEEEECCCCCCCCCCCEEEEEEEHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCHHH
WKRAYREINEFEAQLIHKGYVLVKFWLHIDPDEQLKRFEQRQDNIFKKYKLTDEDWRNRE
HHHHHHHHHHHHHHHHHCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHCCHH
KWDQYAVAINQAIARTSTPAAPWTIVPANDKLYARVFVIETVIEAIEYKLKRLKNGEAIA
HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQQLRSLQNACWQHQLPVTVVLEGWAAAGKGALVKKMTNYMDPRGFSVLPIFEPSAREKQ
CHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCC
YPFLWRFWHKLPAKGSIAFFYHSWYTHVLEDRLFERLDPVEVPLVTREINAFERQLVDDG
CCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
MAIAKFWIHLSQKELKKRLKSAEADELEAWRVRPEDWQQAKNYKEYRHLAEEMLIYSSTG
HHHHHHHHHCCHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCC
AAPWILVEGNDYRWSEIKVLSQLVATIVEALDRCKITIPEAVHIRPQSQLLPTEPDFLAK
CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCEEECCCEEEECCCCCCCCCCCCCEEE
VDLSLELEDKDYKKRLRAAQIKLRQLQLKIHQEKLPVLLLFEGWDAAGKGGAIKRLTDVL
EEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHH
DPRSYKVDAFGAPTEEENRYHYLWRFSRHLPGMGTIGIFDRSWYGRVLVERVEGFATEAE
CCCCEEEECCCCCCCCCCCEEEEEEEHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCHHH
WKRAYREINEFEAQLIHKGYVLVKFWLHIDPDEQLKRFEQRQDNIFKKYKLTDEDWRNRE
HHHHHHHHHHHHHHHHHCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHCCHH
KWDQYAVAINQAIARTSTPAAPWTIVPANDKLYARVFVIETVIEAIEYKLKRLKNGEAIA
HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8199775 [H]