| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078473
Identifier: 170078473
GI number: 170078473
Start: 1959937
End: 1961850
Strand: Reverse
Name: 170078473
Synonym: SYNPCC7002_A1867
Alternate gene names: NA
Gene position: 1961850-1959937 (Counterclockwise)
Preceding gene: 170078474
Following gene: 170078472
Centisome position: 65.22
GC content: 47.39
Gene sequence:
>1914_bases ATGTCTTGTCCAAATCTGGCGACAAAATCGGATATATCGGCCCTTGAGGGGAGAATTTTAGAGGCGCTTTCGGGGCTGGC AACCAAAGGTGATATCTCTGACCTGGAATCGAAAATTGATAGCTTTAGATCCACTATTGAAGATCGTTTAAGCAGCTTAA ATAGTCGAATTAGTGGCCTTGATTCAAAATTGGATGATGCGTTGGCGGCATTGGGGCGGATCGAGGATTTGCTAGAGGGC ACAAACGGGCGAATCAGCAGTATTTGGGATGCAATTTCCAATATTGTGGAATCTTTGGTTAGCCTAATCCGCGATCCAAT TGTGGCGGCGATCAATGCCCAACGGGCTTTAGTTGAGGGGCTTTTTGATTCGCTCCAAGAATTTATCAGGGGGTATTTTG ATGGAATTCAGGCCTTTATAGATGGGGCGTTTGCTTCTCAAAAGGCTTTTATTGATGGTTTTTTTGGGAGTATCCAAACC CTGATCCAGGAATATTTTGGCCTGGTGCGGGATTTGGTTCGCCGAACGAATGAAGAAATAGGGGAGGTTTTAGCTCTAGT TAGAGGATTGGGGGACGATGTGGCGAGTCTCCGAAGTTTGGCCGCCGAAATTCGGCAAGCAGTAAGCGAGAATGGGTCAA CATTACGGGTAATTTCCTCGACTCAACTCCCACAATTGGTTAGCTTATGCCGGGATATTGGGGAGGGAGTAGCAGCCCTG CGAGGGGTGGCGACAGAAATCCGGCAAGCAGTAAGCGAGAATGGGTCAACATTACGGGTAATTTCCTCGACTCAACTCCC ACAATTGGTTAGCTTATGCCGGGATATTGGGGAGGGAGTAGCAGCCCTGCGAGGGGTGGCGACAGAAATCCGGCAATCAG TAGCTGAAAATGGGTCAACATTACGGGTAATCTCCTCGACCCAGCTCCCACAATTGGTTAGCTTATGCCGGGATATTGGG GAGGGAGTAGAGGCTTTACCTGGGGATGTTTGGGGTTATGGCCTGAGCTGCGGCCCTGCTGGGAGTGCGGTTTGTCGATC CCTGTCTGCTGCGGAAGATCCAGAGAAAAACTTTAGTGATGATGACCGCCAGAAGCTTGACGATATTAAGGATGACCTGG ACAACTTGGGGAATGATTTGGAGGCGATCGCCAAAGTGACAGGCGTCCCAGATTTCCCTGGAAAGCTGCCTAAATCGTTA CTAGGAGATGACAACCTCAAGGGAGAAACTGAAGTAGAAAGCATCCCCCAGTTCATCCTGTGGCTAACAAAACAGCTTGA TGCTTTAGTGGGAGAATTTCCGGTGAGTATCGAAGTCACAGACAATGATTTGACTCAATCAGGGAACCAAAAACAAACCA TTCAGCTCCGGAATATCGCCGAAGCCTTTGCCGAGCTGTACGGGCAGGGAGTCTTAACCACAACCCATCAATCAGTGCAA ACAAATGGCCTTGTCCGGGTGGGAACAGAATTAACATCATTAAAAGTGATGGTGGCCGTAGCCCAGGATTTAATCATGGC CACGACTGAATTCCTTGGGTTCAAAACCAAGCAAAAAAGAAGGGATATCGATACATCTTTTACCCTCAAAAAATCAGGCG ATAACAATTACACTCTGGCTAATTTTCTTGACTCCGACAAAATTTCCTACAAAGGCTATGAATTTGATGACGATGACATC CTGATCGAATATTTGCCCCAGTTGATGTATGGCGTCTCCCTCATTAAAGCGGCCACCCTCCGAGGTGAAGATGATGTGAA CGAAATTGAGGATCGCGTCAAGGAAGTCTTGGAGGATGGGGCTTCCGCTTGGGATAAATTCCAGGAAATTGTCAACAATC CCGATTCTGAATACAACATCGATCAAGACGTGAAATTCAAAATTACTGACCGCGATGTGGAGATTGATGAATAA
Upstream 100 bases:
>100_bases TTTAAGGGGTGTTATGGGCTGTTTGAATGTGGGCTGCTTTACGGTGTTTGTGATTTTTGTGATTATTTCACTGCTGATTT TGTCGGGGGTCATCCTTTAA
Downstream 100 bases:
>100_bases TGGCTTTTGAGCTGGACATCGGCGATCTGATTAGCCGCCAAATTAGGGTAGAGGTCGCCCCAGAAGGCCGAGAGATTGGT GATCTTCTTGATGTTTTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 637; Mature: 636
Protein sequence:
>637_residues MSCPNLATKSDISALEGRILEALSGLATKGDISDLESKIDSFRSTIEDRLSSLNSRISGLDSKLDDALAALGRIEDLLEG TNGRISSIWDAISNIVESLVSLIRDPIVAAINAQRALVEGLFDSLQEFIRGYFDGIQAFIDGAFASQKAFIDGFFGSIQT LIQEYFGLVRDLVRRTNEEIGEVLALVRGLGDDVASLRSLAAEIRQAVSENGSTLRVISSTQLPQLVSLCRDIGEGVAAL RGVATEIRQAVSENGSTLRVISSTQLPQLVSLCRDIGEGVAALRGVATEIRQSVAENGSTLRVISSTQLPQLVSLCRDIG EGVEALPGDVWGYGLSCGPAGSAVCRSLSAAEDPEKNFSDDDRQKLDDIKDDLDNLGNDLEAIAKVTGVPDFPGKLPKSL LGDDNLKGETEVESIPQFILWLTKQLDALVGEFPVSIEVTDNDLTQSGNQKQTIQLRNIAEAFAELYGQGVLTTTHQSVQ TNGLVRVGTELTSLKVMVAVAQDLIMATTEFLGFKTKQKRRDIDTSFTLKKSGDNNYTLANFLDSDKISYKGYEFDDDDI LIEYLPQLMYGVSLIKAATLRGEDDVNEIEDRVKEVLEDGASAWDKFQEIVNNPDSEYNIDQDVKFKITDRDVEIDE
Sequences:
>Translated_637_residues MSCPNLATKSDISALEGRILEALSGLATKGDISDLESKIDSFRSTIEDRLSSLNSRISGLDSKLDDALAALGRIEDLLEG TNGRISSIWDAISNIVESLVSLIRDPIVAAINAQRALVEGLFDSLQEFIRGYFDGIQAFIDGAFASQKAFIDGFFGSIQT LIQEYFGLVRDLVRRTNEEIGEVLALVRGLGDDVASLRSLAAEIRQAVSENGSTLRVISSTQLPQLVSLCRDIGEGVAAL RGVATEIRQAVSENGSTLRVISSTQLPQLVSLCRDIGEGVAALRGVATEIRQSVAENGSTLRVISSTQLPQLVSLCRDIG EGVEALPGDVWGYGLSCGPAGSAVCRSLSAAEDPEKNFSDDDRQKLDDIKDDLDNLGNDLEAIAKVTGVPDFPGKLPKSL LGDDNLKGETEVESIPQFILWLTKQLDALVGEFPVSIEVTDNDLTQSGNQKQTIQLRNIAEAFAELYGQGVLTTTHQSVQ TNGLVRVGTELTSLKVMVAVAQDLIMATTEFLGFKTKQKRRDIDTSFTLKKSGDNNYTLANFLDSDKISYKGYEFDDDDI LIEYLPQLMYGVSLIKAATLRGEDDVNEIEDRVKEVLEDGASAWDKFQEIVNNPDSEYNIDQDVKFKITDRDVEIDE >Mature_636_residues SCPNLATKSDISALEGRILEALSGLATKGDISDLESKIDSFRSTIEDRLSSLNSRISGLDSKLDDALAALGRIEDLLEGT NGRISSIWDAISNIVESLVSLIRDPIVAAINAQRALVEGLFDSLQEFIRGYFDGIQAFIDGAFASQKAFIDGFFGSIQTL IQEYFGLVRDLVRRTNEEIGEVLALVRGLGDDVASLRSLAAEIRQAVSENGSTLRVISSTQLPQLVSLCRDIGEGVAALR GVATEIRQAVSENGSTLRVISSTQLPQLVSLCRDIGEGVAALRGVATEIRQSVAENGSTLRVISSTQLPQLVSLCRDIGE GVEALPGDVWGYGLSCGPAGSAVCRSLSAAEDPEKNFSDDDRQKLDDIKDDLDNLGNDLEAIAKVTGVPDFPGKLPKSLL GDDNLKGETEVESIPQFILWLTKQLDALVGEFPVSIEVTDNDLTQSGNQKQTIQLRNIAEAFAELYGQGVLTTTHQSVQT NGLVRVGTELTSLKVMVAVAQDLIMATTEFLGFKTKQKRRDIDTSFTLKKSGDNNYTLANFLDSDKISYKGYEFDDDDIL IEYLPQLMYGVSLIKAATLRGEDDVNEIEDRVKEVLEDGASAWDKFQEIVNNPDSEYNIDQDVKFKITDRDVEIDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69298; Mature: 69167
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCPNLATKSDISALEGRILEALSGLATKGDISDLESKIDSFRSTIEDRLSSLNSRISGL CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSKLDDALAALGRIEDLLEGTNGRISSIWDAISNIVESLVSLIRDPIVAAINAQRALVEG HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFDSLQEFIRGYFDGIQAFIDGAFASQKAFIDGFFGSIQTLIQEYFGLVRDLVRRTNEEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GEVLALVRGLGDDVASLRSLAAEIRQAVSENGSTLRVISSTQLPQLVSLCRDIGEGVAAL HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH RGVATEIRQAVSENGSTLRVISSTQLPQLVSLCRDIGEGVAALRGVATEIRQSVAENGST HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE LRVISSTQLPQLVSLCRDIGEGVEALPGDVWGYGLSCGPAGSAVCRSLSAAEDPEKNFSD EEEECCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCC DDRQKLDDIKDDLDNLGNDLEAIAKVTGVPDFPGKLPKSLLGDDNLKGETEVESIPQFIL HHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHH WLTKQLDALVGEFPVSIEVTDNDLTQSGNQKQTIQLRNIAEAFAELYGQGVLTTTHQSVQ HHHHHHHHHHCCCCCEEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEECHHHHH TNGLVRVGTELTSLKVMVAVAQDLIMATTEFLGFKTKQKRRDIDTSFTLKKSGDNNYTLA CCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCEEEH NFLDSDKISYKGYEFDDDDILIEYLPQLMYGVSLIKAATLRGEDDVNEIEDRVKEVLEDG HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH ASAWDKFQEIVNNPDSEYNIDQDVKFKITDRDVEIDE HHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCC >Mature Secondary Structure SCPNLATKSDISALEGRILEALSGLATKGDISDLESKIDSFRSTIEDRLSSLNSRISGL CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSKLDDALAALGRIEDLLEGTNGRISSIWDAISNIVESLVSLIRDPIVAAINAQRALVEG HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFDSLQEFIRGYFDGIQAFIDGAFASQKAFIDGFFGSIQTLIQEYFGLVRDLVRRTNEEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GEVLALVRGLGDDVASLRSLAAEIRQAVSENGSTLRVISSTQLPQLVSLCRDIGEGVAAL HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH RGVATEIRQAVSENGSTLRVISSTQLPQLVSLCRDIGEGVAALRGVATEIRQSVAENGST HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE LRVISSTQLPQLVSLCRDIGEGVEALPGDVWGYGLSCGPAGSAVCRSLSAAEDPEKNFSD EEEECCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCC DDRQKLDDIKDDLDNLGNDLEAIAKVTGVPDFPGKLPKSLLGDDNLKGETEVESIPQFIL HHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHH WLTKQLDALVGEFPVSIEVTDNDLTQSGNQKQTIQLRNIAEAFAELYGQGVLTTTHQSVQ HHHHHHHHHHCCCCCEEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEECHHHHH TNGLVRVGTELTSLKVMVAVAQDLIMATTEFLGFKTKQKRRDIDTSFTLKKSGDNNYTLA CCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCEEEH NFLDSDKISYKGYEFDDDDILIEYLPQLMYGVSLIKAATLRGEDDVNEIEDRVKEVLEDG HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH ASAWDKFQEIVNNPDSEYNIDQDVKFKITDRDVEIDE HHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA