Click here to switch to the map view.

The map label for this gene is ccmM [H]

Identifier: 170078406

GI number: 170078406

Start: 1885447

End: 1887432

Strand: Reverse

Name: ccmM [H]

Synonym: SYNPCC7002_A1800

Alternate gene names: 170078406

Gene position: 1887432-1885447 (Counterclockwise)

Preceding gene: 170078407

Following gene: 170078405

Centisome position: 62.75

GC content: 52.67

Gene sequence:

>1986_bases
ATGGTAGTCCGCAGTACCGCGGCTCCCCCAACACCTTGGTCTAAGGACTTAGCTGAACCAAAGATTCACGAAAGTGCCTA
TGTGCATTCTTTCTCGAATTTAATTGGTGATGTCACAGTTTGCGAACATGTGCTCATTTCTCCGGGAACGTCTATTCGGG
CAGATGAGGGCGCACCTTTCCATATCGGGGCAGCAACCAATATCCAAGATGGCGTTGTGATCCATGGTTTGGAGCAGGGC
CGTGTCGTTGGGGCAGATGGCCATGACTATTCTGTCTGGATTGGCGATCGCAGCTGTATTACCCACATGGCCCTTGTCCA
TGGTCCCGCCTACATTGGCAACGATTGCTTTGTTGGTTTTCGTTCCACAGTGTTTAATGCCCGCATCGGTGATGGTTGTG
TCATCATGATGCACGCCCTCGTTCAAGATGTGGACATTCCCCCCGGCAAGTATGTGCCTTCGGGAGCTGTGATTACGAAC
CAGCAGCAGGTGGAGCGCCTCTCCAATGTGACCGAGGCCGATCGCGCCTTTGCCAAACAGGTGGTGGAAATCAATGAAGC
ATTACGGGAGGTCTCCCCAGGGGCCACTAATAATGGTTCACGAATTGCTGCCAACCAGCAACCAACCCCCTCTTCTTCTA
CAAATACAAGCGGTACTAGCGAACATCAATCGGTGGGAAATATGAGTTTAAACGGAGATCTTTACAATCAGGTGCGTGGC
CTTGCCGCCCAAGGGTGCACCTTCACCGCAGAATATGCCAACAAGCGGCGCTTCAAAACCAAATCTTGGTTGAGTGCTGG
TTTTGTCGAAGGTCATTCTGCCGATCAAATTATTGGTAACTTGAACCGGGTGCTGGCTGATCATGCCGGGGAATATGTCC
AGTTAATCGCTGTGGCTCCCAATAGCAAATCAAGGGCGGCAGAAATTGTTGTGCAACGTCCAGGCGATAGTGCCCCAGTC
CAAACATCGACAACGGCTAGTTACAGCAATAACGGCAACCGCAGCAACGGCACCAGTGCGGGAAGTCAAGCGGCAGCGGT
TGGGGGCGATTTAACGTCTCAGATCCATGCTTTAGCGTCCCAGGGCTGTAGCTTTACCGCTGAACATGCCAATACCCGTC
GTTTTAAGACGCAATCTTGGTTGAGCGCCGGTTTTGTCGAAGGTCATTCTGCGGAACAAATCATTACCAACGTTAATGGC
TTGTTGGGTCAATATCCCAATGAGTATGTGCAAGTCATTGCCGTTGACCCCCACAGCAAATTTCGGGTAGCGGAATTAAT
CGTCCAGCGTCCTGGGGAAACGGGGACTCTATCTACTAAGGCAACAGCCTCCGCCCGTCGCAGCGGCAACAAGGTGGTTA
ACACGGCCTCGGGTGGTGATGTGGCAGGGCAAATCGCGGCTCTGGCTTCCCAGGGTTGTAGCTTTACGGCAGAACACGCC
AGCACTCGCCGTTTTAAAACCCAGTCTTGGCTAGGGGCAGGCTTTGTGGAGGGTCATTCTGCTAATCAGATTTTGGCAAA
TATCCAGGCGATCGCCGCCCAGTTCCCCAACGAATATGTCCAGTTAATCGCCGTTGACCCCAACTCCAAAACACGGGCCG
CAGAGATCATCATCCAACGCCCTGGCAACAATGCGCCTGTCCAGACAGCAACCGCAACCAGTAGTTTTTCGGGAGGCACG
AAAGCAGCCCCAAGCAGCAATGGTTTCGGGGGTCACAGTAGCGGGAGTCTCAGTGGGGATGTGGTTTCTAAAGTCCGTTC
GCTTTTGATGCAAGGCTACAAGATTGGAACAGAACACGCCGATAAGCGCCGTTTCCGTGTTAAGTCCTGGAGTAGTTGTG
GCACCATTGACAGCACCCAAGAGGCAGAAGTTTTACGTCACCTCGAAGGTTGTCTCCAGGAGCACAGTGGCGAATATGTC
CGCATGATTGGTGTCGATGAAGCGGCTAAACGACGGGTGCTTGAGGAAATTATCCAACGCCCCTAG

Upstream 100 bases:

>100_bases
GTCAATGCGTGGCTCGTTTGGTAATCTCAAGCAATTTATGGCGGATGGTTAAAAGCTAGCGAGAGAAGCAATCAATGACA
TTGATAGGAGGGATTGATTC

Downstream 100 bases:

>100_bases
GTTGTGTAACGCGACCACTTCGTTATGGGGGAGAAAACGAATGTCTATCCCCCAACCCTTACCCCACCTGTGATTAATTG
AATCACCGTTGACAGAATCA

Product: carbon dioxide concentrating mechanism protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 661; Mature: 661

Protein sequence:

>661_residues
MVVRSTAAPPTPWSKDLAEPKIHESAYVHSFSNLIGDVTVCEHVLISPGTSIRADEGAPFHIGAATNIQDGVVIHGLEQG
RVVGADGHDYSVWIGDRSCITHMALVHGPAYIGNDCFVGFRSTVFNARIGDGCVIMMHALVQDVDIPPGKYVPSGAVITN
QQQVERLSNVTEADRAFAKQVVEINEALREVSPGATNNGSRIAANQQPTPSSSTNTSGTSEHQSVGNMSLNGDLYNQVRG
LAAQGCTFTAEYANKRRFKTKSWLSAGFVEGHSADQIIGNLNRVLADHAGEYVQLIAVAPNSKSRAAEIVVQRPGDSAPV
QTSTTASYSNNGNRSNGTSAGSQAAAVGGDLTSQIHALASQGCSFTAEHANTRRFKTQSWLSAGFVEGHSAEQIITNVNG
LLGQYPNEYVQVIAVDPHSKFRVAELIVQRPGETGTLSTKATASARRSGNKVVNTASGGDVAGQIAALASQGCSFTAEHA
STRRFKTQSWLGAGFVEGHSANQILANIQAIAAQFPNEYVQLIAVDPNSKTRAAEIIIQRPGNNAPVQTATATSSFSGGT
KAAPSSNGFGGHSSGSLSGDVVSKVRSLLMQGYKIGTEHADKRRFRVKSWSSCGTIDSTQEAEVLRHLEGCLQEHSGEYV
RMIGVDEAAKRRVLEEIIQRP

Sequences:

>Translated_661_residues
MVVRSTAAPPTPWSKDLAEPKIHESAYVHSFSNLIGDVTVCEHVLISPGTSIRADEGAPFHIGAATNIQDGVVIHGLEQG
RVVGADGHDYSVWIGDRSCITHMALVHGPAYIGNDCFVGFRSTVFNARIGDGCVIMMHALVQDVDIPPGKYVPSGAVITN
QQQVERLSNVTEADRAFAKQVVEINEALREVSPGATNNGSRIAANQQPTPSSSTNTSGTSEHQSVGNMSLNGDLYNQVRG
LAAQGCTFTAEYANKRRFKTKSWLSAGFVEGHSADQIIGNLNRVLADHAGEYVQLIAVAPNSKSRAAEIVVQRPGDSAPV
QTSTTASYSNNGNRSNGTSAGSQAAAVGGDLTSQIHALASQGCSFTAEHANTRRFKTQSWLSAGFVEGHSAEQIITNVNG
LLGQYPNEYVQVIAVDPHSKFRVAELIVQRPGETGTLSTKATASARRSGNKVVNTASGGDVAGQIAALASQGCSFTAEHA
STRRFKTQSWLGAGFVEGHSANQILANIQAIAAQFPNEYVQLIAVDPNSKTRAAEIIIQRPGNNAPVQTATATSSFSGGT
KAAPSSNGFGGHSSGSLSGDVVSKVRSLLMQGYKIGTEHADKRRFRVKSWSSCGTIDSTQEAEVLRHLEGCLQEHSGEYV
RMIGVDEAAKRRVLEEIIQRP
>Mature_661_residues
MVVRSTAAPPTPWSKDLAEPKIHESAYVHSFSNLIGDVTVCEHVLISPGTSIRADEGAPFHIGAATNIQDGVVIHGLEQG
RVVGADGHDYSVWIGDRSCITHMALVHGPAYIGNDCFVGFRSTVFNARIGDGCVIMMHALVQDVDIPPGKYVPSGAVITN
QQQVERLSNVTEADRAFAKQVVEINEALREVSPGATNNGSRIAANQQPTPSSSTNTSGTSEHQSVGNMSLNGDLYNQVRG
LAAQGCTFTAEYANKRRFKTKSWLSAGFVEGHSADQIIGNLNRVLADHAGEYVQLIAVAPNSKSRAAEIVVQRPGDSAPV
QTSTTASYSNNGNRSNGTSAGSQAAAVGGDLTSQIHALASQGCSFTAEHANTRRFKTQSWLSAGFVEGHSAEQIITNVNG
LLGQYPNEYVQVIAVDPHSKFRVAELIVQRPGETGTLSTKATASARRSGNKVVNTASGGDVAGQIAALASQGCSFTAEHA
STRRFKTQSWLGAGFVEGHSANQILANIQAIAAQFPNEYVQLIAVDPNSKTRAAEIIIQRPGNNAPVQTATATSSFSGGT
KAAPSSNGFGGHSSGSLSGDVVSKVRSLLMQGYKIGTEHADKRRFRVKSWSSCGTIDSTQEAEVLRHLEGCLQEHSGEYV
RMIGVDEAAKRRVLEEIIQRP

Specific function: The presence of two potential DNA-binding regions suggests this protein may be a transcriptional regulator [H]

COG id: COG4451

COG function: function code C; Ribulose bisphosphate carboxylase small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI1787667, Length=192, Percent_Identity=30.7291666666667, Blast_Score=67, Evalue=5e-12,
Organism=Escherichia coli, GI87081681, Length=125, Percent_Identity=36, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017156
- InterPro:   IPR000894
- InterPro:   IPR011004 [H]

Pfam domain/function: PF00101 RuBisCO_small [H]

EC number: NA

Molecular weight: Translated: 70070; Mature: 70070

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVRSTAAPPTPWSKDLAEPKIHESAYVHSFSNLIGDVTVCEHVLISPGTSIRADEGAPF
CCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCE
HIGAATNIQDGVVIHGLEQGRVVGADGHDYSVWIGDRSCITHMALVHGPAYIGNDCFVGF
EEECCCCCCCCEEEEECCCCEEECCCCCEEEEEECCHHHHHHHHHHHCCCEECCCEEEEH
RSTVFNARIGDGCVIMMHALVQDVDIPPGKYVPSGAVITNQQQVERLSNVTEADRAFAKQ
HHHHEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHH
VVEINEALREVSPGATNNGSRIAANQQPTPSSSTNTSGTSEHQSVGNMSLNGDLYNQVRG
HHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHCCCEEECCHHHHHHHH
LAAQGCTFTAEYANKRRFKTKSWLSAGFVEGHSADQIIGNLNRVLADHAGEYVQLIAVAP
HHHCCCEEEHHHHCCHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECC
NSKSRAAEIVVQRPGDSAPVQTSTTASYSNNGNRSNGTSAGSQAAAVGGDLTSQIHALAS
CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHH
QGCSFTAEHANTRRFKTQSWLSAGFVEGHSAEQIITNVNGLLGQYPNEYVQVIAVDPHSK
CCCCEEHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCH
FRVAELIVQRPGETGTLSTKATASARRSGNKVVNTASGGDVAGQIAALASQGCSFTAEHA
HHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCEEHHHH
STRRFKTQSWLGAGFVEGHSANQILANIQAIAAQFPNEYVQLIAVDPNSKTRAAEIIIQR
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEEC
PGNNAPVQTATATSSFSGGTKAAPSSNGFGGHSSGSLSGDVVSKVRSLLMQGYKIGTEHA
CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
DKRRFRVKSWSSCGTIDSTQEAEVLRHLEGCLQEHSGEYVRMIGVDEAAKRRVLEEIIQR
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCC
P
C
>Mature Secondary Structure
MVVRSTAAPPTPWSKDLAEPKIHESAYVHSFSNLIGDVTVCEHVLISPGTSIRADEGAPF
CCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCE
HIGAATNIQDGVVIHGLEQGRVVGADGHDYSVWIGDRSCITHMALVHGPAYIGNDCFVGF
EEECCCCCCCCEEEEECCCCEEECCCCCEEEEEECCHHHHHHHHHHHCCCEECCCEEEEH
RSTVFNARIGDGCVIMMHALVQDVDIPPGKYVPSGAVITNQQQVERLSNVTEADRAFAKQ
HHHHEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHH
VVEINEALREVSPGATNNGSRIAANQQPTPSSSTNTSGTSEHQSVGNMSLNGDLYNQVRG
HHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHCCCEEECCHHHHHHHH
LAAQGCTFTAEYANKRRFKTKSWLSAGFVEGHSADQIIGNLNRVLADHAGEYVQLIAVAP
HHHCCCEEEHHHHCCHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECC
NSKSRAAEIVVQRPGDSAPVQTSTTASYSNNGNRSNGTSAGSQAAAVGGDLTSQIHALAS
CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHH
QGCSFTAEHANTRRFKTQSWLSAGFVEGHSAEQIITNVNGLLGQYPNEYVQVIAVDPHSK
CCCCEEHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCH
FRVAELIVQRPGETGTLSTKATASARRSGNKVVNTASGGDVAGQIAALASQGCSFTAEHA
HHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCEEHHHH
STRRFKTQSWLGAGFVEGHSANQILANIQAIAAQFPNEYVQLIAVDPNSKTRAAEIIIQR
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEEC
PGNNAPVQTATATSSFSGGTKAAPSSNGFGGHSSGSLSGDVVSKVRSLLMQGYKIGTEHA
CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
DKRRFRVKSWSSCGTIDSTQEAEVLRHLEGCLQEHSGEYVRMIGVDEAAKRRVLEEIIQR
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8491708 [H]