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The map label for this gene is ccmL [H]

Identifier: 170078407

GI number: 170078407

Start: 1887567

End: 1887866

Strand: Reverse

Name: ccmL [H]

Synonym: SYNPCC7002_A1801

Alternate gene names: 170078407

Gene position: 1887866-1887567 (Counterclockwise)

Preceding gene: 170078408

Following gene: 170078406

Centisome position: 62.76

GC content: 49.0

Gene sequence:

>300_bases
ATGCAAATTGCCAAAGTACGTGGCACTGTCGTCAGCACCTACAAAGCAGAAAGCCTCCGGGGGATTAAATTTTTGCTCGT
TCAATTTATAGATGAACAGGGTCAGCCCCTTCCTAAATATGAAGTGGCAGGAGATCTCGTAGGCGCTGGCGTCAATGAAT
GGGTTTTGGTCAGTCGTGGTGGTGCTGCCCGTACCGAAACGGGAATGGAGGGAAGACCCCTAGATGCGATGGTCATTGGC
ATCATTGATACGGTCAACGTCGATAATCGTTCCCTTTACAGCAAGAAAGATGCAGGCTAA

Upstream 100 bases:

>100_bases
GGTACACCGAAGCCGTAGAACAGTTTCGTGAAAGCGTGAATCCCCAACCTCTGAGAAGAGTGTAATTTTTTAATAAAAAA
ATTTTTAGTTATAAATTTTC

Downstream 100 bases:

>100_bases
ATGGTCTGAATCCTTTCCAGCCGGACTACCCAAAGTCAATGCGTGGCTCGTTTGGTAATCTCAAGCAATTTATGGCGGAT
GGTTAAAAGCTAGCGAGAGA

Product: carbon dioxide concentrating mechanism protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MQIAKVRGTVVSTYKAESLRGIKFLLVQFIDEQGQPLPKYEVAGDLVGAGVNEWVLVSRGGAARTETGMEGRPLDAMVIG
IIDTVNVDNRSLYSKKDAG

Sequences:

>Translated_99_residues
MQIAKVRGTVVSTYKAESLRGIKFLLVQFIDEQGQPLPKYEVAGDLVGAGVNEWVLVSRGGAARTETGMEGRPLDAMVIG
IIDTVNVDNRSLYSKKDAG
>Mature_99_residues
MQIAKVRGTVVSTYKAESLRGIKFLLVQFIDEQGQPLPKYEVAGDLVGAGVNEWVLVSRGGAARTETGMEGRPLDAMVIG
IIDTVNVDNRSLYSKKDAG

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4576

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli and S.typhimurium CchB [H]

Homologues:

Organism=Escherichia coli, GI1788798, Length=95, Percent_Identity=40, Blast_Score=71, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004992
- ProDom:   PD012510 [H]

Pfam domain/function: PF03319 EutN_CcmL [H]

EC number: NA

Molecular weight: Translated: 10667; Mature: 10667

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIAKVRGTVVSTYKAESLRGIKFLLVQFIDEQGQPLPKYEVAGDLVGAGVNEWVLVSRG
CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHCCCHHHCCCCCCEEEEECC
GAARTETGMEGRPLDAMVIGIIDTVNVDNRSLYSKKDAG
CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MQIAKVRGTVVSTYKAESLRGIKFLLVQFIDEQGQPLPKYEVAGDLVGAGVNEWVLVSRG
CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHCCCHHHCCCCCCEEEEECC
GAARTETGMEGRPLDAMVIGIIDTVNVDNRSLYSKKDAG
CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]