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The map label for this gene is ccmN [C]

Identifier: 170078405

GI number: 170078405

Start: 1884637

End: 1885344

Strand: Reverse

Name: ccmN [C]

Synonym: SYNPCC7002_A1799

Alternate gene names: 170078405

Gene position: 1885344-1884637 (Counterclockwise)

Preceding gene: 170078406

Following gene: 170078404

Centisome position: 62.68

GC content: 52.97

Gene sequence:

>708_bases
GTGACTTTCCAGGCAATTACCCATCCAGATATTCAAATTAGTGGCGATGTAAGGATTCATCCCCGTGCGGTTATTGCCCC
CGGTGTTATTCTGCAAGCAACCGAAGGCAATTATGTGGCGATCGCCACTGGTGCTTGTATTGGTGCAGGTGCGATTATCC
AGGCCCACGGCGGCAACATCGAGATCCATGCCGGCGCGATTATCGGGGCAGGCTGCCTGATCATTGGCCAATGCTCAGTG
GGAGAAAATGCCTGCTTAGGTTATGGCTCTACCCTATTTCAAGCGGCGATCGCCGCCGCCGCAATTCTCCCGCCCCAAAG
CCTCATCGGCGATCCGTCCCGCCAAGAAACCACCGCTTCTTACCAGACTCAACCGCCAAAACCCGCGAATCAATCGACAA
CCCAACCCCTCGATCCTTGGCAGGCAGAAGATACAACTAACCAGACTGCCACAACCTTTTCGCCACCAGGGCGATCGCCC
ACTAGCAGCAGCAATCGTCCCAATGTCCAGCCCCCACCAGAAGCAGGATCCCCTCCAACTGAAACACCAAACACCGAAGT
GATGCCGACGGTTCCAGAATCAAAGGAATCCCTAGAATCGGGCGAAAAAACACCAGTTGTCGGGCAAGTTTATATCAATC
AACTATTAATGACCCTATTCCCTCACCAAAATTCTCTCAATACCCCAAATCAACCAGATGAGCCTTAG

Upstream 100 bases:

>100_bases
TGTGTAACGCGACCACTTCGTTATGGGGGAGAAAACGAATGTCTATCCCCCAACCCTTACCCCACCTGTGATTAATTGAA
TCACCGTTGACAGAATCATT

Downstream 100 bases:

>100_bases
CCCCACAAAACTTTCATGATTGCTTGAGTGAAAATTAAATGTTTAAAGTTCTTAAAGGAGATTGTTGAGAAACATAAATA
CTTAATTCATCTCATTTGAA

Product: carbon dioxide concentrating mechanism protein

Products: cofactor [C]

Alternate protein names: ORF I [H]

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MTFQAITHPDIQISGDVRIHPRAVIAPGVILQATEGNYVAIATGACIGAGAIIQAHGGNIEIHAGAIIGAGCLIIGQCSV
GENACLGYGSTLFQAAIAAAAILPPQSLIGDPSRQETTASYQTQPPKPANQSTTQPLDPWQAEDTTNQTATTFSPPGRSP
TSSSNRPNVQPPPEAGSPPTETPNTEVMPTVPESKESLESGEKTPVVGQVYINQLLMTLFPHQNSLNTPNQPDEP

Sequences:

>Translated_235_residues
MTFQAITHPDIQISGDVRIHPRAVIAPGVILQATEGNYVAIATGACIGAGAIIQAHGGNIEIHAGAIIGAGCLIIGQCSV
GENACLGYGSTLFQAAIAAAAILPPQSLIGDPSRQETTASYQTQPPKPANQSTTQPLDPWQAEDTTNQTATTFSPPGRSP
TSSSNRPNVQPPPEAGSPPTETPNTEVMPTVPESKESLESGEKTPVVGQVYINQLLMTLFPHQNSLNTPNQPDEP
>Mature_234_residues
TFQAITHPDIQISGDVRIHPRAVIAPGVILQATEGNYVAIATGACIGAGAIIQAHGGNIEIHAGAIIGAGCLIIGQCSVG
ENACLGYGSTLFQAAIAAAAILPPQSLIGDPSRQETTASYQTQPPKPANQSTTQPLDPWQAEDTTNQTATTFSPPGRSPT
SSSNRPNVQPPPEAGSPPTETPNTEVMPTVPESKESLESGEKTPVVGQVYINQLLMTLFPHQNSLNTPNQPDEP

Specific function: Carnitine metabolism (conversion of carnitine to gamma-butyrobetaine). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24430; Mature: 24299

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFQAITHPDIQISGDVRIHPRAVIAPGVILQATEGNYVAIATGACIGAGAIIQAHGGNI
CCCCCCCCCCEEECCCEEECCCEEECCCEEEEECCCCEEEEECCCEECCCEEEEECCCEE
EIHAGAIIGAGCLIIGQCSVGENACLGYGSTLFQAAIAAAAILPPQSLIGDPSRQETTAS
EEECCEEEECCEEEEEECCCCCCCEECCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCC
YQTQPPKPANQSTTQPLDPWQAEDTTNQTATTFSPPGRSPTSSSNRPNVQPPPEAGSPPT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
ETPNTEVMPTVPESKESLESGEKTPVVGQVYINQLLMTLFPHQNSLNTPNQPDEP
CCCCCCEEECCCCCHHHHHCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TFQAITHPDIQISGDVRIHPRAVIAPGVILQATEGNYVAIATGACIGAGAIIQAHGGNI
CCCCCCCCCEEECCCEEECCCEEECCCEEEEECCCCEEEEECCCEECCCEEEEECCCEE
EIHAGAIIGAGCLIIGQCSVGENACLGYGSTLFQAAIAAAAILPPQSLIGDPSRQETTAS
EEECCEEEECCEEEEEECCCCCCCEECCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCC
YQTQPPKPANQSTTQPLDPWQAEDTTNQTATTFSPPGRSPTSSSNRPNVQPPPEAGSPPT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
ETPNTEVMPTVPESKESLESGEKTPVVGQVYINQLLMTLFPHQNSLNTPNQPDEP
CCCCCCEEECCCCCHHHHHCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: pre-cofactor [C]

Specific reaction: pre-cofactor = cofactor [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2509426 [H]