Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078352

Identifier: 170078352

GI number: 170078352

Start: 1832227

End: 1832586

Strand: Direct

Name: 170078352

Synonym: SYNPCC7002_A1745

Alternate gene names: NA

Gene position: 1832227-1832586 (Clockwise)

Preceding gene: 170078351

Following gene: 170078353

Centisome position: 60.91

GC content: 55.56

Gene sequence:

>360_bases
ATGGCCGCGGCCAGTCAGGGAGCAAAAGTAGCTGGGGGGTTAACGGTGGGCATTTTGCCGGGAAAGAATCACCAGGGTTT
AGCCGACAGCGTCGATATTGCTATTTGTACAGATTTGGGCCATGGCCGCAATAACGTCAATGTTCTCAGTGCGGATGTGG
TGGTGGCAGTGGGCAGCGGTTTGGGCACCGTCTCAGAAATTGCCCTCGCCCTGAAAAACCATAAGCCCGTCATTCTCTGG
CAACCCAGCCCGGCCACCCAAGCCTTTTTTACGGAACTTGCTCCCGGTCAGTTTTCGGTCGCGAAAGATATTCCAGGGGC
GATCGCCCAAATTCAAGCCCTCATGGACAACCCCGCATGA

Upstream 100 bases:

>100_bases
CGGCGCTACTCCAGAAAATTTAACCGCCGCTTACGATCTGGGAAAGGCGATCGCCGAAGCAGGGTGGGTACTGCTCACCG
GGGGCAGGGAGGCTGGGGTG

Downstream 100 bases:

>100_bases
GCATTCATCTATTCCTCCAGTCAACAATAAACTAAACATTTCTGTCCCAATTCCTGTTGTATCGTGGACGAAAGTAGCCC
TCAATCCGGAGCCTCTGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MAAASQGAKVAGGLTVGILPGKNHQGLADSVDIAICTDLGHGRNNVNVLSADVVVAVGSGLGTVSEIALALKNHKPVILW
QPSPATQAFFTELAPGQFSVAKDIPGAIAQIQALMDNPA

Sequences:

>Translated_119_residues
MAAASQGAKVAGGLTVGILPGKNHQGLADSVDIAICTDLGHGRNNVNVLSADVVVAVGSGLGTVSEIALALKNHKPVILW
QPSPATQAFFTELAPGQFSVAKDIPGAIAQIQALMDNPA
>Mature_118_residues
AAASQGAKVAGGLTVGILPGKNHQGLADSVDIAICTDLGHGRNNVNVLSADVVVAVGSGLGTVSEIALALKNHKPVILWQ
PSPATQAFFTELAPGQFSVAKDIPGAIAQIQALMDNPA

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005268
- InterPro:   IPR005269 [H]

Pfam domain/function: PF03641 Lysine_decarbox [H]

EC number: NA

Molecular weight: Translated: 11977; Mature: 11846

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAASQGAKVAGGLTVGILPGKNHQGLADSVDIAICTDLGHGRNNVNVLSADVVVAVGSG
CCCCCCCCEEECCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCEEEECEEEEEECCC
LGTVSEIALALKNHKPVILWQPSPATQAFFTELAPGQFSVAKDIPGAIAQIQALMDNPA
CCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
AAASQGAKVAGGLTVGILPGKNHQGLADSVDIAICTDLGHGRNNVNVLSADVVVAVGSG
CCCCCCCEEECCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCEEEECEEEEEECCC
LGTVSEIALALKNHKPVILWQPSPATQAFFTELAPGQFSVAKDIPGAIAQIQALMDNPA
CCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]