Click here to switch to the map view.

The map label for this gene is recR [H]

Identifier: 170078351

GI number: 170078351

Start: 1831517

End: 1832086

Strand: Direct

Name: recR [H]

Synonym: SYNPCC7002_A1744

Alternate gene names: 170078351

Gene position: 1831517-1832086 (Clockwise)

Preceding gene: 170078350

Following gene: 170078352

Centisome position: 60.89

GC content: 52.81

Gene sequence:

>570_bases
TTGATCGAACAGTTCCAGCGCTTACCCGGTATTGGCCCGAAAACCGCCCAACGCCTTGCCCTATACGTCATCAAGCGCCC
GGAAAAGGATGTGGAAGCCTTTGCCCAGGCACTATTGAACGCGAAAAAACAGGTGGGCGTTTGCCAAAAATGTTTCCATC
TGTCGGCCACTTCGGTTTGTGATATTTGTCGCAATCCCCAACGGGAGCCAGACGTAATTTGTGTGGTGGCGGACTCCAGG
GATGTGATCGCCCTCGAAAAAACCCGGGAATATCGGGGAAAATATCACGTCCTGGGGGGCGTAATTTCGCCGATGGATGG
CATTGGCCCGGAGCAACTGACAATCCAGGCCCTAGTACAACGGGTAAGCGCTGAGAAAACCAAGGAAGTGATTTTAGCGA
TCAATCCCAGTGTAGAAGGGGAAACGACGACGTTGTACCTGGCGCAACTGCTGCGACCCTTTACTAAAGTTACCCGCATT
GCCTTTGGCTTGCCCATGGGCGGTGATTTGGAATATGCCGATGAAGTCACTTTGGCCAGGGCCTTAGAAGGTCGCCGGGA
ACTAGATTAA

Upstream 100 bases:

>100_bases
ACCCACTATTAAGGCTGAGGCGATCGCCTTTTAGAATAGGGTTCGGAGAATTTGACCGTCCCTGGAGGAACCTGCCATTT
ATACGCCCCCCCTCGCCCGC

Downstream 100 bases:

>100_bases
CAATGCGCAAAACGATCATCGGGGTGATGGGGCCGGGGGGCGGCGCTACTCCAGAAAATTTAACCGCCGCTTACGATCTG
GGAAAGGCGATCGCCGAAGC

Product: recombination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MIEQFQRLPGIGPKTAQRLALYVIKRPEKDVEAFAQALLNAKKQVGVCQKCFHLSATSVCDICRNPQREPDVICVVADSR
DVIALEKTREYRGKYHVLGGVISPMDGIGPEQLTIQALVQRVSAEKTKEVILAINPSVEGETTTLYLAQLLRPFTKVTRI
AFGLPMGGDLEYADEVTLARALEGRRELD

Sequences:

>Translated_189_residues
MIEQFQRLPGIGPKTAQRLALYVIKRPEKDVEAFAQALLNAKKQVGVCQKCFHLSATSVCDICRNPQREPDVICVVADSR
DVIALEKTREYRGKYHVLGGVISPMDGIGPEQLTIQALVQRVSAEKTKEVILAINPSVEGETTTLYLAQLLRPFTKVTRI
AFGLPMGGDLEYADEVTLARALEGRRELD
>Mature_189_residues
MIEQFQRLPGIGPKTAQRLALYVIKRPEKDVEAFAQALLNAKKQVGVCQKCFHLSATSVCDICRNPQREPDVICVVADSR
DVIALEKTREYRGKYHVLGGVISPMDGIGPEQLTIQALVQRVSAEKTKEVILAINPSVEGETTTLYLAQLLRPFTKVTRI
AFGLPMGGDLEYADEVTLARALEGRRELD

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=190, Percent_Identity=43.6842105263158, Blast_Score=166, Evalue=6e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000445
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967 [H]

Pfam domain/function: PF00633 HHH; PF02132 RecR; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 20937; Mature: 20937

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEQFQRLPGIGPKTAQRLALYVIKRPEKDVEAFAQALLNAKKQVGVCQKCFHLSATSVC
CCCHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
DICRNPQREPDVICVVADSRDVIALEKTREYRGKYHVLGGVISPMDGIGPEQLTIQALVQ
HHHCCCCCCCCEEEEEECCCCEEEHHHHHHHCCCEEECCCHHCCCCCCCHHHHHHHHHHH
RVSAEKTKEVILAINPSVEGETTTLYLAQLLRPFTKVTRIAFGLPMGGDLEYADEVTLAR
HHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
ALEGRRELD
HHHHHHCCC
>Mature Secondary Structure
MIEQFQRLPGIGPKTAQRLALYVIKRPEKDVEAFAQALLNAKKQVGVCQKCFHLSATSVC
CCCHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
DICRNPQREPDVICVVADSRDVIALEKTREYRGKYHVLGGVISPMDGIGPEQLTIQALVQ
HHHCCCCCCCCEEEEEECCCCEEEHHHHHHHCCCEEECCCHHCCCCCCCHHHHHHHHHHH
RVSAEKTKEVILAINPSVEGETTTLYLAQLLRPFTKVTRIAFGLPMGGDLEYADEVTLAR
HHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
ALEGRRELD
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]