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The map label for this gene is hypA [H]

Identifier: 170078353

GI number: 170078353

Start: 1832687

End: 1833052

Strand: Direct

Name: hypA [H]

Synonym: SYNPCC7002_A1746

Alternate gene names: 170078353

Gene position: 1832687-1833052 (Clockwise)

Preceding gene: 170078352

Following gene: 170078354

Centisome position: 60.93

GC content: 50.55

Gene sequence:

>366_bases
ATGCATGAAGTGGACATGACCAAGGCACTCATCTTGACCATTAAAGATTGGCAGGATAGCCATCCCGAACCCGTCAAGAT
CGAAAAAGTCCACCTCATCGTGGGGCAATTCACCTGTGTTGAACCCGTCAGCTTGGAATTCACTTTTGCTGCCCAAACCC
AAGGCACGTTTCTCGATGGGGTAGCCCTGGTGATCCAAGAAACGCCCCTGATTGCCTACTGCCACACCTGCCAACAAGAA
TATGCCCCCAATATCGGCCTGCAATATTCTTGCCCAGACTGTCATCAGCCTATGGATGATATCCGCTCCGGTCGTGAGCT
AAAAATCGACCGCATTGAATACGCTCCCTTAACTCTCCATTCCTAG

Upstream 100 bases:

>100_bases
GCATTCATCTATTCCTCCAGTCAACAATAAACTAAACATTTCTGTCCCAATTCCTGTTGTATCGTGGACGAAAGTAGCCC
TCAATCCGGAGCCTCTGGCG

Downstream 100 bases:

>100_bases
GAACTAACCACCATGCACCAGACCTTTGACGCTGCCCTGGGGGTCAATCTCCTCCATGCCAACCAAGACCTTGCTGACCA
CAACCGTGAACATTTTGATG

Product: hydrogenase nickel insertion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MHEVDMTKALILTIKDWQDSHPEPVKIEKVHLIVGQFTCVEPVSLEFTFAAQTQGTFLDGVALVIQETPLIAYCHTCQQE
YAPNIGLQYSCPDCHQPMDDIRSGRELKIDRIEYAPLTLHS

Sequences:

>Translated_121_residues
MHEVDMTKALILTIKDWQDSHPEPVKIEKVHLIVGQFTCVEPVSLEFTFAAQTQGTFLDGVALVIQETPLIAYCHTCQQE
YAPNIGLQYSCPDCHQPMDDIRSGRELKIDRIEYAPLTLHS
>Mature_121_residues
MHEVDMTKALILTIKDWQDSHPEPVKIEKVHLIVGQFTCVEPVSLEFTFAAQTQGTFLDGVALVIQETPLIAYCHTCQQE
YAPNIGLQYSCPDCHQPMDDIRSGRELKIDRIEYAPLTLHS

Specific function: Probably plays a role in an hydrogenase nickel cofactor insertion step [H]

COG id: COG0375

COG function: function code R; Zn finger protein HypA/HybF (possibly regulating hydrogenase expression)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hypA/hybF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000688
- InterPro:   IPR020538 [H]

Pfam domain/function: PF01155 HypA [H]

EC number: NA

Molecular weight: Translated: 13712; Mature: 13712

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHEVDMTKALILTIKDWQDSHPEPVKIEKVHLIVGQFTCVEPVSLEFTFAAQTQGTFLDG
CCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEEECEEECCCCEEEEEEECCCCCCEECC
VALVIQETPLIAYCHTCQQEYAPNIGLQYSCPDCHQPMDDIRSGRELKIDRIEYAPLTLH
EEEEEECCCEEEEHHHHHHHHCCCCCEEECCCCCCCCHHHHCCCCEEEEEEEEECEEEEC
S
C
>Mature Secondary Structure
MHEVDMTKALILTIKDWQDSHPEPVKIEKVHLIVGQFTCVEPVSLEFTFAAQTQGTFLDG
CCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEEECEEECCCCEEEEEEECCCCCCEECC
VALVIQETPLIAYCHTCQQEYAPNIGLQYSCPDCHQPMDDIRSGRELKIDRIEYAPLTLH
EEEEEECCCEEEEHHHHHHHHCCCCCEEECCCCCCCCHHHHCCCCEEEEEEEEECEEEEC
S
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]