| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is 170078331
Identifier: 170078331
GI number: 170078331
Start: 1811680
End: 1812432
Strand: Direct
Name: 170078331
Synonym: SYNPCC7002_A1724
Alternate gene names: NA
Gene position: 1811680-1812432 (Clockwise)
Preceding gene: 170078326
Following gene: 170078332
Centisome position: 60.23
GC content: 52.46
Gene sequence:
>753_bases ATGGTGGGCAACTTAAGGCGATCGCCCATGGCCAATCTCAAAATCCCGAAGCAAGAGTATTGCCCCTACGCCCAATATTG GGAACCAAAATCGACCCCAGAAGGTTATGTCCTCTCAGCAGAATCTCCCCAATCGAGAAGCTGGGCCGCGATGGGCTGTG CGGGTCTTTTTATTACGGTGTGGCTGGGGATTTGGTGCGGGGTTTCTTTTACGATGTTTGCGATCGCCCTGTTACAACTC TTCAGAACACCAACCGTCGGCAATATCTTGATGTTGCTGTTCCTAATTCCCTTTGTGGCCATTGGTGTGGGCGGACTGAT TTGGGTTGGGCGACTCCTCTACCAAAAATATCGAATCAAAACTGGGGTACTGATTTTACCGACCTATCCGCTCTATGCTG GGGAAACCTATCGGGTGCGCTATCGTCGTCCCTTGCGTAACGGGCAAACAACCCAAACCGCCCTTTTATCTGCCACCTGG CTGCATTACGAATGGGTGCAATATTATCGCGGCACAGACCTCGAAACTGTGACCCACGGGCTTTCAACCCAGGCTTGCTT GGAGCGCGCCATTGGTCGGGGAGTCAAGCAACTAGAATACACAATCGATCTGACCATTCCCGCCGATGCCAAGCCGAGCA TCTACGCGCCGCCCCACAATCAACTGCGCTGGGAACTTCAGGTGCGTTGTCATTTGCCCCAGGTTGTGCGGGATACATCT TTTTTTAAGTTAAGGGTGGTGAGGAGACCATGA
Upstream 100 bases:
>100_bases ATACGCCGGGGGATGGCTCAGCACGTAGTATTTCGACAAATTGCCATCGGCTGATAAGGTTTATCTATTTTTGGCGACAC CCGGCAAAATTCCAGGGAAA
Downstream 100 bases:
>100_bases CAACGCTGAAAACGCCCATTACGCTACATCTTGACCGTGATGCAGTGAGTTTGGGAGAGAGATTATCGGGTGATTTTGTC TGGCAGCCAGAAGATACGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MVGNLRRSPMANLKIPKQEYCPYAQYWEPKSTPEGYVLSAESPQSRSWAAMGCAGLFITVWLGIWCGVSFTMFAIALLQL FRTPTVGNILMLLFLIPFVAIGVGGLIWVGRLLYQKYRIKTGVLILPTYPLYAGETYRVRYRRPLRNGQTTQTALLSATW LHYEWVQYYRGTDLETVTHGLSTQACLERAIGRGVKQLEYTIDLTIPADAKPSIYAPPHNQLRWELQVRCHLPQVVRDTS FFKLRVVRRP
Sequences:
>Translated_250_residues MVGNLRRSPMANLKIPKQEYCPYAQYWEPKSTPEGYVLSAESPQSRSWAAMGCAGLFITVWLGIWCGVSFTMFAIALLQL FRTPTVGNILMLLFLIPFVAIGVGGLIWVGRLLYQKYRIKTGVLILPTYPLYAGETYRVRYRRPLRNGQTTQTALLSATW LHYEWVQYYRGTDLETVTHGLSTQACLERAIGRGVKQLEYTIDLTIPADAKPSIYAPPHNQLRWELQVRCHLPQVVRDTS FFKLRVVRRP >Mature_250_residues MVGNLRRSPMANLKIPKQEYCPYAQYWEPKSTPEGYVLSAESPQSRSWAAMGCAGLFITVWLGIWCGVSFTMFAIALLQL FRTPTVGNILMLLFLIPFVAIGVGGLIWVGRLLYQKYRIKTGVLILPTYPLYAGETYRVRYRRPLRNGQTTQTALLSATW LHYEWVQYYRGTDLETVTHGLSTQACLERAIGRGVKQLEYTIDLTIPADAKPSIYAPPHNQLRWELQVRCHLPQVVRDTS FFKLRVVRRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28632; Mature: 28632
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGNLRRSPMANLKIPKQEYCPYAQYWEPKSTPEGYVLSAESPQSRSWAAMGCAGLFITV CCCCCCCCCCCCCCCCHHHCCCCHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHH WLGIWCGVSFTMFAIALLQLFRTPTVGNILMLLFLIPFVAIGVGGLIWVGRLLYQKYRIK HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGVLILPTYPLYAGETYRVRYRRPLRNGQTTQTALLSATWLHYEWVQYYRGTDLETVTHG CCEEEEECCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHC LSTQACLERAIGRGVKQLEYTIDLTIPADAKPSIYAPPHNQLRWELQVRCHLPQVVRDTS CCHHHHHHHHHHCCHHEEEEEEEEEECCCCCCCEECCCCCCEEEEEEEEECCHHHHHCCC FFKLRVVRRP EEEEEEEECC >Mature Secondary Structure MVGNLRRSPMANLKIPKQEYCPYAQYWEPKSTPEGYVLSAESPQSRSWAAMGCAGLFITV CCCCCCCCCCCCCCCCHHHCCCCHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHH WLGIWCGVSFTMFAIALLQLFRTPTVGNILMLLFLIPFVAIGVGGLIWVGRLLYQKYRIK HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGVLILPTYPLYAGETYRVRYRRPLRNGQTTQTALLSATWLHYEWVQYYRGTDLETVTHG CCEEEEECCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHC LSTQACLERAIGRGVKQLEYTIDLTIPADAKPSIYAPPHNQLRWELQVRCHLPQVVRDTS CCHHHHHHHHHHCCHHEEEEEEEEEECCCCCCCEECCCCCCEEEEEEEEECCHHHHHCCC FFKLRVVRRP EEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA