| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is yfcK [C]
Identifier: 170078326
GI number: 170078326
Start: 1805210
End: 1806097
Strand: Direct
Name: yfcK [C]
Synonym: SYNPCC7002_A1719
Alternate gene names: 170078326
Gene position: 1805210-1806097 (Clockwise)
Preceding gene: 170078325
Following gene: 170078331
Centisome position: 60.01
GC content: 54.17
Gene sequence:
>888_bases ATGTCTAGCTTGGTGCCCCAGTTAACCGCCGACGGTTCCTACACCTTTTTTTCGGAAGAGTTTCAGGAGCATTTTCACTC CCAGGTGGGGGCCAAACGGGAGGCCGAAGAAAAATTTCTCCTGCCCTGTCGGATCGCTGAACTTGCCCAACGACCACAGC TCCGGCTTTTGGATGTTTGCTACGGCTTGGGTCATAATACCGCCACGGCTCTCACAGAAATTTGGCGCGTTAATCCACAC TGCCAAGTGACCTTATTTGCCCTAGAAAAAGACCAGGCGATCGCCCTCGATAGCATTCAACAAAATATCCTGGCGGCCTA TCCTGAAATGGTAGTTTCCTTACTCCGGGAGCTGAGTAGTGAAAATCTCCAAGTTGAAACAAGGCGGCTTAAAGCCCAAT TGCTCACGGGGGACGCGCGACAAACTATCCAACGGGTGATTCAGTCAAATTTTCAGGCCGATGCCATCTTTCTTGATCCC TTTTCACCGCCAAAATGTCCCCAGCTCTGGACGGTGGAATTTCTCGATTTAGTCGCCCAATGCCTTGCCCCCGACGGCTA TTTGGCAACCTATTCCTGTGCGGCGGCGGTGCGGGTGGCGCTCCAGGCAGCAGGTTTACAACTTGGCAAAACCCCCGGTG TGGGCCGTAAATCCCCTGGCACCCTCGCCCGGTTTATCCCCGACGAACTCACGCCCCTTTCCCAACAGGAGCAGGAACAT CTTCTCACTAATGCGGCGATCGCCTACCGCGATCCGACCCTCCAAGACGATGCAGCAACAATTTTGCAACGGCGACGGGA GGAACAACAATCTAGCCAGCGAGAATCCACGAGCCACTGGAAAAAACGCTGGTCAGCCCTCAATTCAACTGCGCCCGAAA GCGACTGA
Upstream 100 bases:
>100_bases ATGTTTTCAGTGAAACCCTGGCAGAACATGAAGCCGCCACCCAACGGATCCGCGCCACCATCGACGGTGAGACGGAATAG TTAAAAAATCAATCGCGACG
Downstream 100 bases:
>100_bases CACTCACCGACAACAAAATAATCGCAAAACCGCACAGGGCGAAAATATTCGGCCACAGGGAGTCAATCGCCACCCCTTTG AGAATTAAGCTCCGGGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MSSLVPQLTADGSYTFFSEEFQEHFHSQVGAKREAEEKFLLPCRIAELAQRPQLRLLDVCYGLGHNTATALTEIWRVNPH CQVTLFALEKDQAIALDSIQQNILAAYPEMVVSLLRELSSENLQVETRRLKAQLLTGDARQTIQRVIQSNFQADAIFLDP FSPPKCPQLWTVEFLDLVAQCLAPDGYLATYSCAAAVRVALQAAGLQLGKTPGVGRKSPGTLARFIPDELTPLSQQEQEH LLTNAAIAYRDPTLQDDAATILQRRREEQQSSQRESTSHWKKRWSALNSTAPESD
Sequences:
>Translated_295_residues MSSLVPQLTADGSYTFFSEEFQEHFHSQVGAKREAEEKFLLPCRIAELAQRPQLRLLDVCYGLGHNTATALTEIWRVNPH CQVTLFALEKDQAIALDSIQQNILAAYPEMVVSLLRELSSENLQVETRRLKAQLLTGDARQTIQRVIQSNFQADAIFLDP FSPPKCPQLWTVEFLDLVAQCLAPDGYLATYSCAAAVRVALQAAGLQLGKTPGVGRKSPGTLARFIPDELTPLSQQEQEH LLTNAAIAYRDPTLQDDAATILQRRREEQQSSQRESTSHWKKRWSALNSTAPESD >Mature_294_residues SSLVPQLTADGSYTFFSEEFQEHFHSQVGAKREAEEKFLLPCRIAELAQRPQLRLLDVCYGLGHNTATALTEIWRVNPHC QVTLFALEKDQAIALDSIQQNILAAYPEMVVSLLRELSSENLQVETRRLKAQLLTGDARQTIQRVIQSNFQADAIFLDPF SPPKCPQLWTVEFLDLVAQCLAPDGYLATYSCAAAVRVALQAAGLQLGKTPGVGRKSPGTLARFIPDELTPLSQQEQEHL LTNAAIAYRDPTLQDDAATILQRRREEQQSSQRESTSHWKKRWSALNSTAPESD
Specific function: Unknown
COG id: COG4121
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082084, Length=96, Percent_Identity=37.5, Blast_Score=64, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008471 [H]
Pfam domain/function: PF05430 DUF752 [H]
EC number: NA
Molecular weight: Translated: 32977; Mature: 32845
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLVPQLTADGSYTFFSEEFQEHFHSQVGAKREAEEKFLLPCRIAELAQRPQLRLLDVC CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHCCCCHHHHHHH YGLGHNTATALTEIWRVNPHCQVTLFALEKDQAIALDSIQQNILAAYPEMVVSLLRELSS HCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC ENLQVETRRLKAQLLTGDARQTIQRVIQSNFQADAIFLDPFSPPKCPQLWTVEFLDLVAQ CCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHH CLAPDGYLATYSCAAAVRVALQAAGLQLGKTPGVGRKSPGTLARFIPDELTPLSQQEQEH HHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCHHCCCCCHHHHHH LLTNAAIAYRDPTLQDDAATILQRRREEQQSSQRESTSHWKKRWSALNSTAPESD HHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SSLVPQLTADGSYTFFSEEFQEHFHSQVGAKREAEEKFLLPCRIAELAQRPQLRLLDVC CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHCCCCHHHHHHH YGLGHNTATALTEIWRVNPHCQVTLFALEKDQAIALDSIQQNILAAYPEMVVSLLRELSS HCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC ENLQVETRRLKAQLLTGDARQTIQRVIQSNFQADAIFLDPFSPPKCPQLWTVEFLDLVAQ CCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHH CLAPDGYLATYSCAAAVRVALQAAGLQLGKTPGVGRKSPGTLARFIPDELTPLSQQEQEH HHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCHHCCCCCHHHHHH LLTNAAIAYRDPTLQDDAATILQRRREEQQSSQRESTSHWKKRWSALNSTAPESD HHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]